Warning: Permanently added '54.147.221.199' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6940943-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 0.70 PID: 6035 Logging PID: 6036 Task: {'appstream': False, 'background': True, 'build_id': 6940943, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'f2cc1cbdd9c8f29b181848a19a53469677ed9d54', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'COPASI', 'package_version': '4.42.284-5', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/releng', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/releng', 'tags': [], 'task_id': '6940943-fedora-rawhide-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI', '/var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI'... Running: git checkout f2cc1cbdd9c8f29b181848a19a53469677ed9d54 -- cmd: ['git', 'checkout', 'f2cc1cbdd9c8f29b181848a19a53469677ed9d54', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI rc: 0 stdout: stderr: Note: switching to 'f2cc1cbdd9c8f29b181848a19a53469677ed9d54'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at f2cc1cb automatic import of COPASI Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading COPASI-Build-284.tar.gz INFO: Reading stdout from command: curl --help all /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Calling: curl -H Pragma: -o COPASI-Build-284.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/COPASI/COPASI-Build-284.tar.gz/md5/ef461df70cde8900517de385642ee4ae/COPASI-Build-284.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.1M 100 25.1M 0 0 258M 0 --:--:-- --:--:-- --:--:-- 259M INFO: Reading stdout from command: md5sum COPASI-Build-284.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705956493.110265 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705956493.110265 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI/COPASI.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1705956493.110265/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1705956493.110265/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/88b6da98ff7776cfdea9d8fa0fbd1ce4bcff7969fa81f0d598c85d1ab6096641/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/88b6da98ff7776cfdea9d8fa0fbd1ce4bcff7969fa81f0d598c85d1ab6096641/merged) with podman image umount INFO: Using 'dnf' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 114 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 237 MB/s | 73 MB 00:00 fedora 53 MB/s | 70 MB 00:01 Last metadata expiration check: 0:00:03 ago on Mon Jan 22 20:48:39 2024. Dependencies resolved. =========================================================================================================== Package Arch Version Repository Size =========================================================================================================== Installing: dnf5 aarch64 5.1.11-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 509 k dnf5-plugins aarch64 5.1.11-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 307 k Installing dependencies: fmt aarch64 10.2.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k libdnf5 aarch64 5.1.11-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 849 k libdnf5-cli aarch64 5.1.11-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 208 k sdbus-cpp aarch64 1.4.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 102 k Transaction Summary =========================================================================================================== Install 6 Packages Total download size: 2.0 M Installed size: 6.7 M Downloading Packages: (1/6): dnf5-plugins-5.1.11-1.fc40.aarch64.rpm 3.0 MB/s | 307 kB 00:00 (2/6): fmt-10.2.1-1.fc40.aarch64.rpm 1.1 MB/s | 121 kB 00:00 (3/6): libdnf5-5.1.11-1.fc40.aarch64.rpm 103 MB/s | 849 kB 00:00 (4/6): dnf5-5.1.11-1.fc40.aarch64.rpm 4.5 MB/s | 509 kB 00:00 (5/6): libdnf5-cli-5.1.11-1.fc40.aarch64.rpm 25 MB/s | 208 kB 00:00 (6/6): sdbus-cpp-1.4.0-1.fc40.aarch64.rpm 21 MB/s | 102 kB 00:00 -------------------------------------------------------------------------------- Total 17 MB/s | 2.0 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.2.1-1.fc40.aarch64 1/6 Installing : libdnf5-5.1.11-1.fc40.aarch64 2/6 Installing : libdnf5-cli-5.1.11-1.fc40.aarch64 3/6 Installing : dnf5-5.1.11-1.fc40.aarch64 4/6 Installing : sdbus-cpp-1.4.0-1.fc40.aarch64 5/6 Installing : dnf5-plugins-5.1.11-1.fc40.aarch64 6/6 Running scriptlet: dnf5-plugins-5.1.11-1.fc40.aarch64 6/6 Installed: dnf5-5.1.11-1.fc40.aarch64 dnf5-plugins-5.1.11-1.fc40.aarch64 fmt-10.2.1-1.fc40.aarch64 libdnf5-5.1.11-1.fc40.aarch64 libdnf5-cli-5.1.11-1.fc40.aarch64 sdbus-cpp-1.4.0-1.fc40.aarch64 Complete! INFO: Switching package manager from dnf to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1705956493.110265/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1-2.fc40.aarch64 rpm-sequoia-1.5.0-2.fc40.aarch64 python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch dnf5-5.1.11-1.fc40.aarch64 dnf5-plugins-5.1.11-1.fc40.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 33.0 MiB/s | 19.7 MiB | 00m01s Copr repository 100% | 67.7 MiB/s | 3.2 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 143.2 MiB/s | 17.0 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.26-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 MiB bzip2 aarch64 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 427.5 KiB coreutils aarch64 9.4-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.7 MiB cpio aarch64 2.14-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils aarch64 3.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB fedora-release-common noarch 40-0.29 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19.1 KiB findutils aarch64 1:4.9.0-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB gawk aarch64 5.3.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 MiB glibc-minimal-langpack aarch64 2.38.9000-33.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep aarch64 3.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB gzip aarch64 1.12-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 475.8 KiB info aarch64 7.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 613.5 KiB patch aarch64 2.7.6-22.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.5 KiB redhat-rpm-config noarch 280-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183.2 KiB rpm-build aarch64 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB sed aarch64 4.8-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 941.8 KiB shadow-utils aarch64 2:4.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.1 MiB tar aarch64 2:1.35-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB unzip aarch64 6.0-62.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 726.6 KiB util-linux aarch64 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 16.5 MiB which aarch64 2.21-40.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 248.1 KiB xz aarch64 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB Installing dependencies: alternatives aarch64 1.26-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.2 KiB ansible-srpm-macros noarch 1-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs aarch64 4.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 547.2 KiB authselect aarch64 1.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 312.4 KiB authselect-libs aarch64 1.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB basesystem noarch 11-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B binutils aarch64 2.41-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.8 MiB binutils-gold aarch64 2.41-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB bzip2-libs aarch64 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 200.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB coreutils-common aarch64 9.4-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB cracklib aarch64 2.9.11-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 934.7 KiB crypto-policies noarch 20231204-1.git1e3a2e4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 149.3 KiB curl aarch64 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 922.4 KiB cyrus-sasl-lib aarch64 2.1.28-17.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB debugedit aarch64 5.0-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 498.8 KiB dwz aarch64 0.15-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 386.7 KiB ed aarch64 1.20-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 282.3 KiB efi-srpm-macros noarch 5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils aarch64 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.0 MiB elfutils-debuginfod-client aarch64 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.8 KiB elfutils-default-yama-scope noarch 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf aarch64 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB elfutils-libs aarch64 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB fedora-gpg-keys noarch 40-0.2 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.8 MiB pam-libs aarch64 1.5.3-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.0 KiB pcre2 aarch64 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 841.5 KiB pcre2-syntax noarch 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 235.1 KiB perl-srpm-macros noarch 1-51.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf aarch64 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 235.7 KiB pkgconf-m4 noarch 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13.9 KiB pkgconf-pkg-config aarch64 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 990.0 B popt aarch64 1.19-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.8 KiB publicsuffix-list-dafsa noarch 20240107-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.11.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 KiB python-srpm-macros noarch 3.12-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.1 KiB qt5-srpm-macros noarch 5.15.12-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 492.0 B qt6-srpm-macros noarch 6.6.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline aarch64 8.2-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 753.1 KiB rpm aarch64 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.0 MiB rpm-build-libs aarch64 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.4 KiB rpm-libs aarch64 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.7 KiB rpm-sequoia aarch64 1.5.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB rust-srpm-macros noarch 25.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.1 KiB setup noarch 2.14.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.4 KiB sqlite-libs aarch64 3.45.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs aarch64 255.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB util-linux-core aarch64 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.1 MiB xxhash-libs aarch64 0.8.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 212.2 KiB xz-libs aarch64 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 265.6 KiB zig-srpm-macros noarch 1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 3.0-39.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB zlib-ng-compat aarch64 2.1.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.7 KiB zstd aarch64 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 152 packages Total size of inbound packages is 52 MiB. Need to download 52 MiB. After this operation 303 MiB will be used (install 303 MiB, remove 0 B). [ 1/152] bzip2-0:1.0.8-16.fc39.aarch64 100% | 1.5 MiB/s | 52.3 KiB | 00m00s [ 2/152] coreutils-0:9.4-3.fc40.aarch6 100% | 31.8 MiB/s | 1.2 MiB | 00m00s [ 3/152] bash-0:5.2.26-1.fc40.aarch64 100% | 45.6 MiB/s | 1.8 MiB | 00m00s [ 4/152] fedora-release-common-0:40-0. 100% | 6.7 MiB/s | 20.5 KiB | 00m00s [ 5/152] diffutils-0:3.10-3.fc39.aarch 100% | 54.0 MiB/s | 387.3 KiB | 00m00s [ 6/152] cpio-0:2.14-5.fc40.aarch64 100% | 20.3 MiB/s | 269.8 KiB | 00m00s [ 7/152] findutils-1:4.9.0-6.fc40.aarc 100% | 59.2 MiB/s | 485.3 KiB | 00m00s [ 8/152] gawk-0:5.3.0-1.fc40.aarch64 100% | 116.3 MiB/s | 1.0 MiB | 00m00s [ 9/152] glibc-minimal-langpack-0:2.38 100% | 15.5 MiB/s | 95.4 KiB | 00m00s [ 10/152] grep-0:3.11-5.fc40.aarch64 100% | 55.7 MiB/s | 285.0 KiB | 00m00s [ 11/152] gzip-0:1.12-6.fc39.aarch64 100% | 30.8 MiB/s | 157.8 KiB | 00m00s [ 12/152] patch-0:2.7.6-22.fc39.aarch64 100% | 40.1 MiB/s | 123.3 KiB | 00m00s [ 13/152] redhat-rpm-config-0:280-1.fc4 100% | 18.4 MiB/s | 75.2 KiB | 00m00s [ 14/152] info-0:7.1-1.fc40.aarch64 100% | 25.5 MiB/s | 182.9 KiB | 00m00s [ 15/152] rpm-build-0:4.19.1-2.fc40.aar 100% | 23.6 MiB/s | 72.4 KiB | 00m00s [ 16/152] tar-2:1.35-2.fc40.aarch64 100% | 91.7 MiB/s | 845.1 KiB | 00m00s [ 17/152] sed-0:4.8-14.fc39.aarch64 100% | 24.0 MiB/s | 294.8 KiB | 00m00s [ 18/152] shadow-utils-2:4.14.0-2.fc40. 100% | 100.0 MiB/s | 1.2 MiB | 00m00s [ 19/152] which-0:2.21-40.fc39.aarch64 100% | 10.2 MiB/s | 41.8 KiB | 00m00s [ 20/152] unzip-0:6.0-62.fc39.aarch64 100% | 25.5 MiB/s | 182.9 KiB | 00m00s [ 21/152] util-linux-0:2.39.3-2.fc40.aa 100% | 124.7 MiB/s | 1.1 MiB | 00m00s [ 22/152] xz-libs-0:5.4.5-1.fc40.aarch6 100% | 17.3 MiB/s | 106.6 KiB | 00m00s [ 23/152] xz-0:5.4.5-1.fc40.aarch64 100% | 39.9 MiB/s | 531.3 KiB | 00m00s [ 24/152] glibc-0:2.38.9000-33.fc40.aar 100% | 111.6 MiB/s | 1.8 MiB | 00m00s [ 25/152] audit-libs-0:4.0-1.fc40.aarch 100% | 16.8 MiB/s | 120.6 KiB | 00m00s [ 26/152] libblkid-0:2.39.3-2.fc40.aarc 100% | 28.3 MiB/s | 116.0 KiB | 00m00s [ 27/152] authselect-libs-0:1.5.0-1.fc4 100% | 28.6 MiB/s | 234.3 KiB | 00m00s [ 28/152] libcap-ng-0:0.8.4-2.fc40.aarc 100% | 7.9 MiB/s | 32.5 KiB | 00m00s [ 29/152] libmount-0:2.39.3-2.fc40.aarc 100% | 37.5 MiB/s | 153.6 KiB | 00m00s [ 30/152] libfdisk-0:2.39.3-2.fc40.aarc 100% | 30.8 MiB/s | 157.9 KiB | 00m00s [ 31/152] libselinux-0:3.6-2.fc40.aarch 100% | 21.4 MiB/s | 87.5 KiB | 00m00s [ 32/152] libutempter-0:1.2.1-10.fc39.a 100% | 6.5 MiB/s | 26.8 KiB | 00m00s [ 33/152] libsmartcols-0:2.39.3-2.fc40. 100% | 12.8 MiB/s | 65.7 KiB | 00m00s [ 34/152] libuuid-0:2.39.3-2.fc40.aarch 100% | 9.2 MiB/s | 28.4 KiB | 00m00s [ 35/152] ncurses-libs-0:6.4-9.20240113 100% | 45.9 MiB/s | 329.0 KiB | 00m00s [ 36/152] pam-libs-0:1.5.3-9.fc40.aarch 100% | 9.3 MiB/s | 57.2 KiB | 00m00s [ 37/152] pam-0:1.5.3-9.fc40.aarch64 100% | 46.2 MiB/s | 520.6 KiB | 00m00s [ 38/152] systemd-libs-0:255.2-2.fc40.a 100% | 94.9 MiB/s | 680.0 KiB | 00m00s [ 39/152] readline-0:8.2-7.fc40.aarch64 100% | 26.1 MiB/s | 213.4 KiB | 00m00s [ 40/152] zlib-ng-compat-0:2.1.6-1.fc40 100% | 12.9 MiB/s | 66.2 KiB | 00m00s [ 41/152] util-linux-core-0:2.39.3-2.fc 100% | 53.3 MiB/s | 491.3 KiB | 00m00s [ 42/152] bzip2-libs-0:1.0.8-16.fc39.aa 100% | 7.0 MiB/s | 42.8 KiB | 00m00s [ 43/152] libacl-0:2.3.1-11.fc40.aarch6 100% | 7.8 MiB/s | 24.1 KiB | 00m00s [ 44/152] libgcc-0:14.0.1-0.2.fc40.aarc 100% | 20.2 MiB/s | 82.8 KiB | 00m00s [ 45/152] libcap-0:2.69-1.fc40.aarch64 100% | 20.4 MiB/s | 83.7 KiB | 00m00s [ 46/152] lz4-libs-0:1.9.4-4.fc39.aarch 100% | 16.6 MiB/s | 67.8 KiB | 00m00s [ 47/152] libattr-0:2.5.2-1.fc40.aarch6 100% | 5.8 MiB/s | 17.8 KiB | 00m00s [ 48/152] libzstd-0:1.5.5-4.fc39.aarch6 100% | 45.6 MiB/s | 280.3 KiB | 00m00s [ 49/152] libeconf-0:0.5.2-1.fc40.aarch 100% | 9.8 MiB/s | 30.1 KiB | 00m00s [ 50/152] libsemanage-0:3.6-1.fc40.aarc 100% | 27.8 MiB/s | 113.7 KiB | 00m00s [ 51/152] libxcrypt-0:4.4.36-4.fc40.aar 100% | 29.9 MiB/s | 122.6 KiB | 00m00s [ 52/152] setup-0:2.14.5-1.fc40.noarch 100% | 28.9 MiB/s | 148.1 KiB | 00m00s [ 53/152] debugedit-0:5.0-12.fc40.aarch 100% | 19.1 MiB/s | 78.1 KiB | 00m00s [ 54/152] elfutils-libelf-0:0.190-4.fc4 100% | 37.9 MiB/s | 193.9 KiB | 00m00s [ 55/152] elfutils-0:0.190-4.fc40.aarch 100% | 59.3 MiB/s | 546.2 KiB | 00m00s [ 56/152] file-0:5.45-1.fc40.aarch64 100% | 12.1 MiB/s | 49.4 KiB | 00m00s [ 57/152] pkgconf-pkg-config-0:1.9.5-2. 100% | 2.4 MiB/s | 9.6 KiB | 00m00s [ 58/152] popt-0:1.19-3.fc39.aarch64 100% | 11.5 MiB/s | 59.1 KiB | 00m00s [ 59/152] rpm-0:4.19.1-2.fc40.aarch64 100% | 71.1 MiB/s | 509.6 KiB | 00m00s [ 60/152] binutils-0:2.41-30.fc40.aarch 100% | 198.8 MiB/s | 6.8 MiB | 00m00s [ 61/152] rpm-build-libs-0:4.19.1-2.fc4 100% | 8.2 MiB/s | 92.0 KiB | 00m00s [ 62/152] rpm-libs-0:4.19.1-2.fc40.aarc 100% | 24.9 MiB/s | 305.7 KiB | 00m00s [ 63/152] zstd-0:1.5.5-4.fc39.aarch64 100% | 62.2 MiB/s | 445.7 KiB | 00m00s [ 64/152] libarchive-0:3.7.2-1.fc40.aar 100% | 56.1 MiB/s | 402.3 KiB | 00m00s [ 65/152] ansible-srpm-macros-0:1-12.fc 100% | 6.8 MiB/s | 20.9 KiB | 00m00s [ 66/152] dwz-0:0.15-3.fc39.aarch64 100% | 33.1 MiB/s | 135.7 KiB | 00m00s [ 67/152] efi-srpm-macros-0:5-9.fc39.no 100% | 5.4 MiB/s | 22.2 KiB | 00m00s [ 68/152] fonts-srpm-macros-1:2.0.5-12. 100% | 6.5 MiB/s | 26.5 KiB | 00m00s [ 69/152] fpc-srpm-macros-0:1.3-8.fc39. 100% | 2.4 MiB/s | 7.4 KiB | 00m00s [ 70/152] forge-srpm-macros-0:0.2.0-1.f 100% | 6.0 MiB/s | 18.5 KiB | 00m00s [ 71/152] glibc-gconv-extra-0:2.38.9000 100% | 116.9 MiB/s | 2.0 MiB | 00m00s [ 72/152] ghc-srpm-macros-0:1.6.1-3.fc4 100% | 2.0 MiB/s | 8.1 KiB | 00m00s [ 73/152] gnat-srpm-macros-0:6-3.fc39.n 100% | 2.2 MiB/s | 8.8 KiB | 00m00s [ 74/152] kernel-srpm-macros-0:1.0-20.f 100% | 3.4 MiB/s | 10.5 KiB | 00m00s [ 75/152] go-srpm-macros-0:3.3.1-1.fc40 100% | 9.0 MiB/s | 27.7 KiB | 00m00s [ 76/152] lua-srpm-macros-0:1-9.fc39.no 100% | 2.8 MiB/s | 8.6 KiB | 00m00s [ 77/152] openblas-srpm-macros-0:2-14.f 100% | 2.5 MiB/s | 7.5 KiB | 00m00s [ 78/152] ocaml-srpm-macros-0:9-1.fc40. 100% | 2.2 MiB/s | 9.0 KiB | 00m00s [ 79/152] package-notes-srpm-macros-0:0 100% | 2.7 MiB/s | 11.2 KiB | 00m00s [ 80/152] perl-srpm-macros-0:1-51.fc39. 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 81/152] pyproject-srpm-macros-0:1.11. 100% | 4.8 MiB/s | 14.8 KiB | 00m00s [ 82/152] python-srpm-macros-0:3.12-5.f 100% | 8.1 MiB/s | 24.9 KiB | 00m00s [ 83/152] qt6-srpm-macros-0:6.6.1-3.fc4 100% | 2.9 MiB/s | 8.8 KiB | 00m00s [ 84/152] qt5-srpm-macros-0:5.15.12-1.f 100% | 2.1 MiB/s | 8.4 KiB | 00m00s [ 85/152] rust-srpm-macros-0:25.2-2.fc4 100% | 3.2 MiB/s | 13.0 KiB | 00m00s [ 86/152] zig-srpm-macros-0:1-1.fc40.no 100% | 1.6 MiB/s | 8.0 KiB | 00m00s [ 87/152] pkgconf-0:1.9.5-2.fc39.aarch6 100% | 8.3 MiB/s | 42.3 KiB | 00m00s [ 88/152] zip-0:3.0-39.fc40.aarch64 100% | 36.6 MiB/s | 262.1 KiB | 00m00s [ 89/152] pkgconf-m4-0:1.9.5-2.fc39.noa 100% | 4.5 MiB/s | 13.9 KiB | 00m00s [ 90/152] libpkgconf-0:1.9.5-2.fc39.aar 100% | 12.4 MiB/s | 38.1 KiB | 00m00s [ 91/152] ed-0:1.20-1.fc40.aarch64 100% | 19.8 MiB/s | 81.2 KiB | 00m00s [ 92/152] authselect-0:1.5.0-1.fc40.aar 100% | 46.8 MiB/s | 143.8 KiB | 00m00s [ 93/152] gdbm-1:1.23-4.fc39.aarch64 100% | 36.2 MiB/s | 148.4 KiB | 00m00s [ 94/152] gdbm-libs-1:1.23-4.fc39.aarch 100% | 18.3 MiB/s | 56.2 KiB | 00m00s [ 95/152] libnsl2-0:2.0.0-6.fc39.aarch6 100% | 9.8 MiB/s | 30.0 KiB | 00m00s [ 96/152] libpwquality-0:1.4.5-6.fc39.a 100% | 26.6 MiB/s | 108.9 KiB | 00m00s [ 97/152] libtirpc-0:1.3.4-1.rc1.fc40.a 100% | 23.3 MiB/s | 95.4 KiB | 00m00s [ 98/152] crypto-policies-0:20231204-1. 100% | 13.4 MiB/s | 68.7 KiB | 00m00s [ 99/152] openssl-libs-1:3.1.4-1.fc40.a 100% | 136.2 MiB/s | 2.0 MiB | 00m00s [100/152] ca-certificates-0:2023.2.62_v 100% | 64.8 MiB/s | 862.6 KiB | 00m00s [101/152] ncurses-base-0:6.4-9.20240113 100% | 12.4 MiB/s | 63.5 KiB | 00m00s [102/152] libcom_err-0:1.47.0-2.fc39.aa 100% | 8.5 MiB/s | 26.1 KiB | 00m00s [103/152] libsepol-0:3.6-1.fc40.aarch64 100% | 52.7 MiB/s | 323.5 KiB | 00m00s [104/152] krb5-libs-0:1.21.2-3.fc40.aar 100% | 75.0 MiB/s | 767.8 KiB | 00m00s [105/152] pcre2-0:10.42-2.fc40.aarch64 100% | 42.8 MiB/s | 219.1 KiB | 00m00s [106/152] cracklib-0:2.9.11-2.fc39.aarc 100% | 20.3 MiB/s | 83.2 KiB | 00m00s [107/152] keyutils-libs-0:1.6.3-1.fc40. 100% | 10.3 MiB/s | 31.5 KiB | 00m00s [108/152] libxml2-0:2.12.4-1.fc40.aarch 100% | 111.0 MiB/s | 682.2 KiB | 00m00s [109/152] libverto-0:0.3.2-6.fc39.aarch 100% | 5.0 MiB/s | 20.5 KiB | 00m00s [110/152] glibc-common-0:2.38.9000-33.f 100% | 72.6 MiB/s | 371.6 KiB | 00m00s [111/152] basesystem-0:11-18.fc39.noarc 100% | 2.3 MiB/s | 7.2 KiB | 00m00s [112/152] filesystem-0:3.18-6.fc39.aarc 100% | 106.9 MiB/s | 1.1 MiB | 00m00s [113/152] gmp-1:6.2.1-5.fc39.aarch64 100% | 32.5 MiB/s | 266.4 KiB | 00m00s [114/152] mpfr-0:4.2.1-1.fc40.aarch64 100% | 44.7 MiB/s | 320.2 KiB | 00m00s [115/152] fedora-repos-0:40-0.2.noarch 100% | 3.0 MiB/s | 9.3 KiB | 00m00s [116/152] elfutils-libs-0:0.190-4.fc40. 100% | 42.1 MiB/s | 258.7 KiB | 00m00s [117/152] file-libs-0:5.45-1.fc40.aarch 100% | 92.9 MiB/s | 761.4 KiB | 00m00s [118/152] p11-kit-0:0.25.3-1.fc40.aarch 100% | 58.7 MiB/s | 481.0 KiB | 00m00s [119/152] libstdc++-0:14.0.1-0.2.fc40.a 100% | 52.9 MiB/s | 812.4 KiB | 00m00s [120/152] coreutils-common-0:9.4-3.fc40 100% | 151.8 MiB/s | 2.1 MiB | 00m00s [121/152] p11-kit-trust-0:0.25.3-1.fc40 100% | 27.5 MiB/s | 140.6 KiB | 00m00s [122/152] alternatives-0:1.26-1.fc40.aa 100% | 6.3 MiB/s | 38.5 KiB | 00m00s [123/152] elfutils-debuginfod-client-0: 100% | 9.1 MiB/s | 37.3 KiB | 00m00s [124/152] jansson-0:2.13.1-7.fc39.aarch 100% | 11.1 MiB/s | 45.5 KiB | 00m00s [125/152] lua-libs-0:5.4.6-3.fc39.aarch 100% | 21.3 MiB/s | 130.9 KiB | 00m00s [126/152] binutils-gold-0:2.41-30.fc40. 100% | 52.2 MiB/s | 963.0 KiB | 00m00s [127/152] rpm-sequoia-0:1.5.0-2.fc40.aa 100% | 68.3 MiB/s | 838.8 KiB | 00m00s [128/152] sqlite-libs-0:3.45.0-1.fc40.a 100% | 68.8 MiB/s | 704.6 KiB | 00m00s [129/152] libgomp-0:14.0.1-0.2.fc40.aar 100% | 62.2 MiB/s | 318.5 KiB | 00m00s [130/152] pcre2-syntax-0:10.42-2.fc40.n 100% | 28.0 MiB/s | 143.1 KiB | 00m00s [131/152] libtasn1-0:4.19.0-3.fc39.aarc 100% | 14.3 MiB/s | 73.1 KiB | 00m00s [132/152] fedora-repos-rawhide-0:40-0.2 100% | 4.4 MiB/s | 8.9 KiB | 00m00s [133/152] libffi-0:3.4.4-5.fc40.aarch64 100% | 9.1 MiB/s | 37.4 KiB | 00m00s [134/152] fedora-gpg-keys-0:40-0.2.noar 100% | 29.1 MiB/s | 119.4 KiB | 00m00s [135/152] fedora-release-0:40-0.29.noar 100% | 3.3 MiB/s | 10.0 KiB | 00m00s [136/152] elfutils-default-yama-scope-0 100% | 3.1 MiB/s | 12.8 KiB | 00m00s [137/152] fedora-release-identity-basic 100% | 3.5 MiB/s | 10.8 KiB | 00m00s [138/152] curl-0:8.5.0-1.fc40.aarch64 100% | 71.9 MiB/s | 368.0 KiB | 00m00s [139/152] xxhash-libs-0:0.8.2-1.fc39.aa 100% | 8.5 MiB/s | 34.8 KiB | 00m00s [140/152] libcurl-0:8.5.0-1.fc40.aarch6 100% | 25.4 MiB/s | 337.9 KiB | 00m00s [141/152] gdb-minimal-0:14.1-5.fc40.aar 100% | 157.3 MiB/s | 3.9 MiB | 00m00s [142/152] libidn2-0:2.3.4-3.fc39.aarch6 100% | 18.1 MiB/s | 111.4 KiB | 00m00s [143/152] libbrotli-0:1.1.0-1.fc40.aarc 100% | 42.0 MiB/s | 344.4 KiB | 00m00s [144/152] libpsl-0:0.21.5-1.fc40.aarch6 100% | 15.5 MiB/s | 63.7 KiB | 00m00s [145/152] libnghttp2-0:1.59.0-1.fc40.aa 100% | 18.5 MiB/s | 75.8 KiB | 00m00s [146/152] libssh-0:0.10.6-2.fc40.aarch6 100% | 26.0 MiB/s | 213.2 KiB | 00m00s [147/152] openldap-0:2.6.6-1.fc39.aarch 100% | 24.5 MiB/s | 251.1 KiB | 00m00s [148/152] cyrus-sasl-lib-0:2.1.28-17.fc 100% | 69.1 MiB/s | 778.4 KiB | 00m00s [149/152] libevent-0:2.1.12-9.fc39.aarc 100% | 35.4 MiB/s | 253.5 KiB | 00m00s [150/152] libssh-config-0:0.10.6-2.fc40 100% | 2.2 MiB/s | 9.1 KiB | 00m00s [151/152] publicsuffix-list-dafsa-0:202 100% | 9.4 MiB/s | 58.0 KiB | 00m00s [152/152] libunistring-0:1.1-5.fc40.aar 100% | 65.9 MiB/s | 539.8 KiB | 00m00s -------------------------------------------------------------------------------- [152/152] Total 100% | 128.5 MiB/s | 51.6 MiB | 00m00s Running transaction [ 1/154] Verify package files 100% | 756.0 B/s | 152.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-6.fc39.aarch64 >>> Stop pre-transaction scriptlet: filesystem-0:3.18-6.fc39.aarch64 [ 2/154] Prepare transaction 100% | 2.4 KiB/s | 152.0 B | 00m00s [ 3/154] Installing libgcc-0:14.0.1-0. 100% | 171.8 MiB/s | 351.8 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.0.1-0.2.fc40.aarch64 >>> Stop post-install scriptlet: libgcc-0:14.0.1-0.2.fc40.aarch64 [ 4/154] Installing crypto-policies-0: 100% | 19.7 MiB/s | 181.7 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20231204-1.git1e3a2e4.fc40 >>> Stop post-install scriptlet: crypto-policies-0:20231204-1.git1e3a2e4.fc40.no [ 5/154] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 6/154] Installing fedora-gpg-keys-0: 100% | 32.7 MiB/s | 167.6 KiB | 00m00s [ 7/154] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/154] Installing fedora-repos-0:40- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/154] Installing fedora-release-com 100% | 22.6 MiB/s | 23.2 KiB | 00m00s [ 10/154] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/154] Installing setup-0:2.14.5-1.f 100% | 50.6 MiB/s | 725.8 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.14.5-1.fc40.noarch >>> Stop post-install scriptlet: setup-0:2.14.5-1.fc40.noarch [ 12/154] Installing filesystem-0:3.18- 100% | 2.2 MiB/s | 212.4 KiB | 00m00s [ 13/154] Installing basesystem-0:11-18 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/154] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 15/154] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 16/154] Installing pcre2-syntax-0:10. 100% | 77.3 MiB/s | 237.6 KiB | 00m00s [ 17/154] Installing coreutils-common-0 100% | 347.4 MiB/s | 11.5 MiB | 00m00s [ 18/154] Installing ncurses-base-0:6.4 100% | 57.2 MiB/s | 351.6 KiB | 00m00s [ 19/154] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 20/154] Installing ncurses-libs-0:6.4 100% | 374.6 MiB/s | 2.2 MiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.38.9000-33.fc40.aarch64 >>> Stop pre-install scriptlet: glibc-0:2.38.9000-33.fc40.aarch64 [ 21/154] Installing glibc-0:2.38.9000- 100% | 256.5 MiB/s | 9.7 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.38.9000-33.fc40.aarch64 >>> Stop post-install scriptlet: glibc-0:2.38.9000-33.fc40.aarch64 [ 22/154] Installing bash-0:5.2.26-1.fc 100% | 332.5 MiB/s | 8.3 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.26-1.fc40.aarch64 >>> Stop post-install scriptlet: bash-0:5.2.26-1.fc40.aarch64 [ 23/154] Installing glibc-common-0:2.3 100% | 320.3 MiB/s | 2.6 MiB | 00m00s [ 24/154] Installing glibc-gconv-extra- 100% | 533.1 MiB/s | 49.0 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.38.9000-33.fc40.aarch6 >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.38.9000-33.fc40.aarch64 [ 25/154] Installing zlib-ng-compat-0:2 100% | 256.3 MiB/s | 262.5 KiB | 00m00s [ 26/154] Installing xz-libs-0:5.4.5-1. 100% | 260.5 MiB/s | 266.7 KiB | 00m00s [ 27/154] Installing bzip2-libs-0:1.0.8 100% | 197.1 MiB/s | 201.8 KiB | 00m00s [ 28/154] Installing libuuid-0:2.39.3-2 100% | 194.1 MiB/s | 198.8 KiB | 00m00s [ 29/154] Installing readline-0:8.2-7.f 100% | 368.8 MiB/s | 755.2 KiB | 00m00s [ 30/154] Installing libzstd-0:1.5.5-4. 100% | 389.2 MiB/s | 797.2 KiB | 00m00s [ 31/154] Installing elfutils-libelf-0: 100% | 376.8 MiB/s | 1.1 MiB | 00m00s [ 32/154] Installing popt-0:1.19-3.fc39 100% | 91.0 MiB/s | 279.5 KiB | 00m00s [ 33/154] Installing libstdc++-0:14.0.1 100% | 307.8 MiB/s | 2.8 MiB | 00m00s [ 34/154] Installing libblkid-0:2.39.3- 100% | 384.6 MiB/s | 393.9 KiB | 00m00s [ 35/154] Installing libattr-0:2.5.2-1. 100% | 192.8 MiB/s | 197.5 KiB | 00m00s [ 36/154] Installing libacl-0:2.3.1-11. 100% | 192.2 MiB/s | 196.8 KiB | 00m00s [ 37/154] Installing libxcrypt-0:4.4.36 100% | 196.1 MiB/s | 401.6 KiB | 00m00s [ 38/154] Installing gmp-1:6.2.1-5.fc39 100% | 353.3 MiB/s | 723.5 KiB | 00m00s [ 39/154] Installing lz4-libs-0:1.9.4-4 100% | 256.3 MiB/s | 262.5 KiB | 00m00s [ 40/154] Installing libeconf-0:0.5.2-1 100% | 200.8 MiB/s | 205.7 KiB | 00m00s [ 41/154] Installing gdbm-libs-1:1.23-4 100% | 417.5 MiB/s | 427.5 KiB | 00m00s [ 42/154] Installing mpfr-0:4.2.1-1.fc4 100% | 267.0 MiB/s | 820.2 KiB | 00m00s [ 43/154] Installing gawk-0:5.3.0-1.fc4 100% | 387.5 MiB/s | 4.3 MiB | 00m00s [ 44/154] Installing dwz-0:0.15-3.fc39. 100% | 379.0 MiB/s | 388.1 KiB | 00m00s [ 45/154] Installing unzip-0:6.0-62.fc3 100% | 356.5 MiB/s | 730.2 KiB | 00m00s [ 46/154] Installing file-libs-0:5.45-1 100% | 589.6 MiB/s | 10.0 MiB | 00m00s [ 47/154] Installing file-0:5.45-1.fc40 100% | 262.6 MiB/s | 268.9 KiB | 00m00s [ 48/154] Installing libcap-ng-0:0.8.4- 100% | 409.0 MiB/s | 418.9 KiB | 00m00s [ 49/154] Installing audit-libs-0:4.0-1 100% | 268.2 MiB/s | 549.2 KiB | 00m00s [ 50/154] Installing pam-libs-0:1.5.3-9 100% | 297.5 MiB/s | 609.2 KiB | 00m00s [ 51/154] Installing libcap-0:2.69-1.fc 100% | 457.4 MiB/s | 1.4 MiB | 00m00s [ 52/154] Installing systemd-libs-0:255 100% | 351.1 MiB/s | 2.5 MiB | 00m00s [ 53/154] Installing libsmartcols-0:2.3 100% | 282.6 MiB/s | 289.4 KiB | 00m00s [ 54/154] Installing libcom_err-0:1.47. 100% | 234.7 MiB/s | 240.3 KiB | 00m00s [ 55/154] Installing libsepol-0:3.6-1.f 100% | 284.8 MiB/s | 875.1 KiB | 00m00s [ 56/154] Installing pcre2-0:10.42-2.fc 100% | 411.6 MiB/s | 842.9 KiB | 00m00s [ 57/154] Installing libselinux-0:3.6-2 100% | 260.0 MiB/s | 266.2 KiB | 00m00s [ 58/154] Installing sed-0:4.8-14.fc39. 100% | 185.5 MiB/s | 949.8 KiB | 00m00s [ 59/154] Installing grep-0:3.11-5.fc40 100% | 182.8 MiB/s | 1.1 MiB | 00m00s [ 60/154] Installing findutils-1:4.9.0- 100% | 237.3 MiB/s | 1.7 MiB | 00m00s [ 61/154] Installing xz-0:5.4.5-1.fc40. 100% | 228.3 MiB/s | 2.3 MiB | 00m00s [ 62/154] Installing libmount-0:2.39.3- 100% | 237.0 MiB/s | 485.5 KiB | 00m00s [ 63/154] Installing alternatives-0:1.2 100% | 214.7 MiB/s | 219.9 KiB | 00m00s [ 64/154] Installing jansson-0:2.13.1-7 100% | 216.6 MiB/s | 221.8 KiB | 00m00s [ 65/154] Installing lua-libs-0:5.4.6-3 100% | 384.9 MiB/s | 394.2 KiB | 00m00s [ 66/154] Installing libtasn1-0:4.19.0- 100% | 278.8 MiB/s | 285.5 KiB | 00m00s [ 67/154] Installing libunistring-0:1.1 100% | 374.2 MiB/s | 1.9 MiB | 00m00s [ 68/154] Installing libidn2-0:2.3.4-3. 100% | 148.8 MiB/s | 457.0 KiB | 00m00s [ 69/154] Installing libpsl-0:0.21.5-1. 100% | 193.0 MiB/s | 197.6 KiB | 00m00s [ 70/154] Installing util-linux-core-0: 100% | 435.5 MiB/s | 6.1 MiB | 00m00s [ 71/154] Installing tar-2:1.35-2.fc40. 100% | 306.7 MiB/s | 3.1 MiB | 00m00s [ 72/154] Installing libsemanage-0:3.6- 100% | 177.3 MiB/s | 363.2 KiB | 00m00s [ 73/154] Installing shadow-utils-2:4.1 100% | 163.4 MiB/s | 7.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-10.fc39.aarch64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-10.fc39.aarch64 [ 74/154] Installing libutempter-0:1.2. 100% | 136.6 MiB/s | 419.6 KiB | 00m00s [ 75/154] Installing zip-0:3.0-39.fc40. 100% | 281.0 MiB/s | 1.1 MiB | 00m00s [ 76/154] Installing gdbm-1:1.23-4.fc39 100% | 227.8 MiB/s | 933.2 KiB | 00m00s [ 77/154] Installing cyrus-sasl-lib-0:2 100% | 345.2 MiB/s | 3.1 MiB | 00m00s [ 78/154] Installing zstd-0:1.5.5-4.fc3 100% | 312.0 MiB/s | 1.6 MiB | 00m00s [ 79/154] Installing libfdisk-0:2.39.3- 100% | 242.3 MiB/s | 496.2 KiB | 00m00s [ 80/154] Installing bzip2-0:1.0.8-16.f 100% | 211.0 MiB/s | 432.0 KiB | 00m00s [ 81/154] Installing libxml2-0:2.12.4-1 100% | 314.8 MiB/s | 2.2 MiB | 00m00s [ 82/154] Installing sqlite-libs-0:3.45 100% | 299.1 MiB/s | 1.5 MiB | 00m00s [ 83/154] Installing ed-0:1.20-1.fc40.a 100% | 277.9 MiB/s | 284.6 KiB | 00m00s [ 84/154] Installing patch-0:2.7.6-22.f 100% | 320.3 MiB/s | 328.0 KiB | 00m00s [ 85/154] Installing elfutils-default-y 100% | 255.4 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.190-4.fc40.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.190-4.fc40.noar [ 86/154] Installing cpio-0:2.14-5.fc40 100% | 191.9 MiB/s | 1.2 MiB | 00m00s [ 87/154] Installing diffutils-0:3.10-3 100% | 263.6 MiB/s | 2.1 MiB | 00m00s [ 88/154] Installing libpkgconf-0:1.9.5 100% | 194.4 MiB/s | 199.1 KiB | 00m00s [ 89/154] Installing pkgconf-0:1.9.5-2. 100% | 116.3 MiB/s | 238.3 KiB | 00m00s [ 90/154] Installing keyutils-libs-0:1. 100% | 222.4 MiB/s | 227.8 KiB | 00m00s [ 91/154] Installing libverto-0:0.3.2-6 100% | 194.6 MiB/s | 199.2 KiB | 00m00s [ 92/154] Installing libgomp-0:14.0.1-0 100% | 275.9 MiB/s | 564.9 KiB | 00m00s [ 93/154] Installing libffi-0:3.4.4-5.f 100% | 276.2 MiB/s | 282.8 KiB | 00m00s [ 94/154] Installing p11-kit-0:0.25.3-1 100% | 235.9 MiB/s | 2.8 MiB | 00m00s [ 95/154] Installing p11-kit-trust-0:0. 100% | 58.4 MiB/s | 657.3 KiB | 00m00s >>> Running post-install scriptlet: p11-kit-trust-0:0.25.3-1.fc40.aarch64 >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.3-1.fc40.aarch64 [ 96/154] Installing openssl-libs-1:3.1 100% | 327.1 MiB/s | 7.2 MiB | 00m00s [ 97/154] Installing coreutils-0:9.4-3. 100% | 433.2 MiB/s | 20.8 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.n >>> Stop pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.noar [ 98/154] Installing ca-certificates-0: 100% | 2.4 MiB/s | 2.3 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40. >>> Stop post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40.noa [ 99/154] Installing krb5-libs-0:1.21.2 100% | 283.9 MiB/s | 3.4 MiB | 00m00s [100/154] Installing libtirpc-0:1.3.4-1 100% | 270.0 MiB/s | 276.4 KiB | 00m00s [101/154] Installing gzip-0:1.12-6.fc39 100% | 156.7 MiB/s | 481.4 KiB | 00m00s >>> Running pre-install scriptlet: authselect-libs-0:1.5.0-1.fc40.aarch64 >>> Stop pre-install scriptlet: authselect-libs-0:1.5.0-1.fc40.aarch64 [102/154] Installing authselect-libs-0: 100% | 155.7 MiB/s | 1.1 MiB | 00m00s [103/154] Installing authselect-0:1.5.0 100% | 103.1 MiB/s | 316.8 KiB | 00m00s [104/154] Installing cracklib-0:2.9.11- 100% | 154.0 MiB/s | 946.1 KiB | 00m00s [105/154] Installing libpwquality-0:1.4 100% | 184.6 MiB/s | 1.1 MiB | 00m00s [106/154] Installing libnsl2-0:2.0.0-6. 100% | 217.8 MiB/s | 223.0 KiB | 00m00s [107/154] Installing pam-0:1.5.3-9.fc40 100% | 373.8 MiB/s | 10.8 MiB | 00m00s [108/154] Installing libssh-0:0.10.6-2. 100% | 284.8 MiB/s | 583.2 KiB | 00m00s [109/154] Installing libarchive-0:3.7.2 100% | 338.7 MiB/s | 1.0 MiB | 00m00s [110/154] Installing rpm-sequoia-0:1.5. 100% | 320.5 MiB/s | 2.2 MiB | 00m00s [111/154] Installing rpm-libs-0:4.19.1- 100% | 281.0 MiB/s | 863.2 KiB | 00m00s [112/154] Installing libevent-0:2.1.12- 100% | 380.7 MiB/s | 1.5 MiB | 00m00s [113/154] Installing openldap-0:2.6.6-1 100% | 331.1 MiB/s | 1.0 MiB | 00m00s [114/154] Installing xxhash-libs-0:0.8. 100% | 208.6 MiB/s | 213.6 KiB | 00m00s [115/154] Installing libbrotli-0:1.1.0- 100% | 285.1 MiB/s | 1.1 MiB | 00m00s [116/154] Installing libnghttp2-0:1.59. 100% | 257.0 MiB/s | 263.2 KiB | 00m00s [117/154] Installing libcurl-0:8.5.0-1. 100% | 279.2 MiB/s | 857.6 KiB | 00m00s [118/154] Installing elfutils-debuginfo 100% | 389.4 MiB/s | 398.8 KiB | 00m00s [119/154] Installing elfutils-libs-0:0. 100% | 326.8 MiB/s | 1.0 MiB | 00m00s [120/154] Installing binutils-gold-0:2. 100% | 170.7 MiB/s | 3.1 MiB | 00m00s >>> Running post-install scriptlet: binutils-gold-0:2.41-30.fc40.aarch64 >>> Stop post-install scriptlet: binutils-gold-0:2.41-30.fc40.aarch64 [121/154] Installing binutils-0:2.41-30 100% | 356.6 MiB/s | 32.8 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.41-30.fc40.aarch64 >>> Stop post-install scriptlet: binutils-0:2.41-30.fc40.aarch64 [122/154] Installing elfutils-0:0.190-4 100% | 385.8 MiB/s | 5.0 MiB | 00m00s [123/154] Installing gdb-minimal-0:14.1 100% | 368.2 MiB/s | 12.1 MiB | 00m00s [124/154] Installing debugedit-0:5.0-12 100% | 244.9 MiB/s | 501.5 KiB | 00m00s [125/154] Installing rpm-build-libs-0:4 100% | 257.0 MiB/s | 263.2 KiB | 00m00s [126/154] Installing curl-0:8.5.0-1.fc4 100% | 56.4 MiB/s | 924.7 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1-2.fc40.aarch64 >>> Stop pre-install scriptlet: rpm-0:4.19.1-2.fc40.aarch64 [127/154] Installing rpm-0:4.19.1-2.fc4 100% | 156.1 MiB/s | 3.4 MiB | 00m00s [128/154] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [129/154] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [130/154] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [131/154] Installing pkgconf-m4-0:1.9.5 100% | 0.0 B/s | 14.3 KiB | 00m00s [132/154] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [133/154] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.8 KiB | 00m00s [134/154] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/154] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 768.0 B | 00m00s [136/154] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/154] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/154] Installing openblas-srpm-macr 100% | 0.0 B/s | 384.0 B | 00m00s [139/154] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/154] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/154] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/154] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 648.0 B | 00m00s [143/154] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/154] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/154] Installing fonts-srpm-macros- 100% | 55.1 MiB/s | 56.5 KiB | 00m00s [146/154] Installing forge-srpm-macros- 100% | 37.7 MiB/s | 38.6 KiB | 00m00s [147/154] Installing go-srpm-macros-0:3 100% | 60.2 MiB/s | 61.6 KiB | 00m00s [148/154] Installing python-srpm-macros 100% | 50.1 MiB/s | 51.3 KiB | 00m00s [149/154] Installing redhat-rpm-config- 100% | 92.6 MiB/s | 189.6 KiB | 00m00s [150/154] Installing rpm-build-0:4.19.1 100% | 301.1 MiB/s | 1.2 MiB | 00m00s [151/154] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [152/154] Installing util-linux-0:2.39. 100% | 415.2 MiB/s | 16.6 MiB | 00m00s [153/154] Installing which-0:2.21-40.fc 100% | 244.4 MiB/s | 250.3 KiB | 00m00s [154/154] Installing info-0:7.1-1.fc40. 100% | 471.2 KiB/s | 613.9 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-6.fc39.aarch64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-6.fc39.aarch64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-4.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-1.fc40.aarch64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-1.fc40.aarch64 >>> Running post-transaction scriptlet: rpm-0:4.19.1-2.fc40.aarch64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1-2.fc40.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.38.9000-33.fc40.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.38.9000-33.fc40.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-1.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-1.fc40.aarch64 Warning: skipped PGP checks for 152 package(s). Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-1.fc40.aarch64 ansible-srpm-macros-1-12.fc40.noarch audit-libs-4.0-1.fc40.aarch64 authselect-1.5.0-1.fc40.aarch64 authselect-libs-1.5.0-1.fc40.aarch64 basesystem-11-18.fc39.noarch bash-5.2.26-1.fc40.aarch64 binutils-2.41-30.fc40.aarch64 binutils-gold-2.41-30.fc40.aarch64 bzip2-1.0.8-16.fc39.aarch64 bzip2-libs-1.0.8-16.fc39.aarch64 ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-3.fc40.aarch64 coreutils-common-9.4-3.fc40.aarch64 cpio-2.14-5.fc40.aarch64 cracklib-2.9.11-2.fc39.aarch64 crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.aarch64 cyrus-sasl-lib-2.1.28-17.fc40.aarch64 debugedit-5.0-12.fc40.aarch64 diffutils-3.10-3.fc39.aarch64 dwz-0.15-3.fc39.aarch64 ed-1.20-1.fc40.aarch64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.aarch64 elfutils-debuginfod-client-0.190-4.fc40.aarch64 elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.aarch64 elfutils-libs-0.190-4.fc40.aarch64 fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.29.noarch fedora-release-common-40-0.29.noarch fedora-release-identity-basic-40-0.29.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.aarch64 file-libs-5.45-1.fc40.aarch64 filesystem-3.18-6.fc39.aarch64 findutils-4.9.0-6.fc40.aarch64 fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.3.0-1.fc40.aarch64 gdb-minimal-14.1-5.fc40.aarch64 gdbm-1.23-4.fc39.aarch64 gdbm-libs-1.23-4.fc39.aarch64 ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-33.fc40.aarch64 glibc-common-2.38.9000-33.fc40.aarch64 glibc-gconv-extra-2.38.9000-33.fc40.aarch64 glibc-minimal-langpack-2.38.9000-33.fc40.aarch64 gmp-6.2.1-5.fc39.aarch64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.aarch64 gzip-1.12-6.fc39.aarch64 info-7.1-1.fc40.aarch64 jansson-2.13.1-7.fc39.aarch64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.aarch64 krb5-libs-1.21.2-3.fc40.aarch64 libacl-2.3.1-11.fc40.aarch64 libarchive-3.7.2-1.fc40.aarch64 libattr-2.5.2-1.fc40.aarch64 libblkid-2.39.3-2.fc40.aarch64 libbrotli-1.1.0-1.fc40.aarch64 libcap-2.69-1.fc40.aarch64 libcap-ng-0.8.4-2.fc40.aarch64 libcom_err-1.47.0-2.fc39.aarch64 libcurl-8.5.0-1.fc40.aarch64 libeconf-0.5.2-1.fc40.aarch64 libevent-2.1.12-9.fc39.aarch64 libfdisk-2.39.3-2.fc40.aarch64 libffi-3.4.4-5.fc40.aarch64 libgcc-14.0.1-0.2.fc40.aarch64 libgomp-14.0.1-0.2.fc40.aarch64 libidn2-2.3.4-3.fc39.aarch64 libmount-2.39.3-2.fc40.aarch64 libnghttp2-1.59.0-1.fc40.aarch64 libnsl2-2.0.0-6.fc39.aarch64 libpkgconf-1.9.5-2.fc39.aarch64 libpsl-0.21.5-1.fc40.aarch64 libpwquality-1.4.5-6.fc39.aarch64 libselinux-3.6-2.fc40.aarch64 libsemanage-3.6-1.fc40.aarch64 libsepol-3.6-1.fc40.aarch64 libsmartcols-2.39.3-2.fc40.aarch64 libssh-0.10.6-2.fc40.aarch64 libssh-config-0.10.6-2.fc40.noarch libstdc++-14.0.1-0.2.fc40.aarch64 libtasn1-4.19.0-3.fc39.aarch64 libtirpc-1.3.4-1.rc1.fc40.aarch64 libunistring-1.1-5.fc40.aarch64 libutempter-1.2.1-10.fc39.aarch64 libuuid-2.39.3-2.fc40.aarch64 libverto-0.3.2-6.fc39.aarch64 libxcrypt-4.4.36-4.fc40.aarch64 libxml2-2.12.4-1.fc40.aarch64 libzstd-1.5.5-4.fc39.aarch64 lua-libs-5.4.6-3.fc39.aarch64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.aarch64 mpfr-4.2.1-1.fc40.aarch64 ncurses-base-6.4-9.20240113.fc40.noarch ncurses-libs-6.4-9.20240113.fc40.aarch64 ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.aarch64 openssl-libs-3.1.4-1.fc40.aarch64 p11-kit-0.25.3-1.fc40.aarch64 p11-kit-trust-0.25.3-1.fc40.aarch64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.aarch64 pam-libs-1.5.3-9.fc40.aarch64 patch-2.7.6-22.fc39.aarch64 pcre2-10.42-2.fc40.aarch64 pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.aarch64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.aarch64 popt-1.19-3.fc39.aarch64 publicsuffix-list-dafsa-20240107-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-7.fc40.aarch64 redhat-rpm-config-280-1.fc40.noarch rpm-4.19.1-2.fc40.aarch64 rpm-build-4.19.1-2.fc40.aarch64 rpm-build-libs-4.19.1-2.fc40.aarch64 rpm-libs-4.19.1-2.fc40.aarch64 rpm-sequoia-1.5.0-2.fc40.aarch64 rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.aarch64 setup-2.14.5-1.fc40.noarch shadow-utils-4.14.0-2.fc40.aarch64 sqlite-libs-3.45.0-1.fc40.aarch64 systemd-libs-255.2-2.fc40.aarch64 tar-1.35-2.fc40.aarch64 unzip-6.0-62.fc39.aarch64 util-linux-2.39.3-2.fc40.aarch64 util-linux-core-2.39.3-2.fc40.aarch64 which-2.21-40.fc39.aarch64 xxhash-libs-0.8.2-1.fc39.aarch64 xz-5.4.5-1.fc40.aarch64 xz-libs-5.4.5-1.fc40.aarch64 zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.aarch64 zlib-ng-compat-2.1.6-1.fc40.aarch64 zstd-1.5.5-4.fc39.aarch64 Start: buildsrpm Start: rpmbuild -bs sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1705956493.110265/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-i4jr_49a/COPASI/COPASI.spec) Config(child) 1 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc40.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1705956493.110265/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1705956493.110265/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1705956493.110265/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1-2.fc40.aarch64 rpm-sequoia-1.5.0-2.fc40.aarch64 python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch dnf5-5.1.11-1.fc40.aarch64 dnf5-plugins-5.1.11-1.fc40.aarch64 Finish: chroot init Start: build phase for COPASI-4.42.284-5.fc40.src.rpm Start: build setup for COPASI-4.42.284-5.fc40.src.rpm sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc40.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 187.5 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 73.2 KiB/s | 1.5 KiB | 00m00s fedora 100% | 99.6 KiB/s | 10.6 KiB | 00m00s Repositories loaded. Package "pkgconf-pkg-config-1.9.5-2.fc39.aarch64" is already installed. 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[ 1/355] ImageMagick-1:7.1.1.26-4.fc40 100% | 4.5 MiB/s | 78.1 KiB | 00m00s [ 2/355] bzip2-devel-0:1.0.8-16.fc39.a 100% | 5.6 MiB/s | 213.7 KiB | 00m00s [ 3/355] cppunit-devel-0:1.15.1-17.fc4 100% | 7.0 MiB/s | 57.3 KiB | 00m00s [ 4/355] bison-0:3.8.2-6.fc40.aarch64 100% | 17.0 MiB/s | 976.8 KiB | 00m00s [ 5/355] crossguid2-devel-0:0.2.2-15.2 100% | 989.7 KiB/s | 12.9 KiB | 00m00s [ 6/355] desktop-file-utils-0:0.26-9.f 100% | 17.4 MiB/s | 71.3 KiB | 00m00s [ 7/355] expat-devel-0:2.5.0-3.fc39.aa 100% | 8.4 MiB/s | 51.7 KiB | 00m00s [ 8/355] flex-0:2.6.4-14.fc40.aarch64 100% | 22.4 MiB/s | 298.1 KiB | 00m00s [ 9/355] flexiblas-devel-0:3.4.1-2.fc4 100% | 52.7 MiB/s | 108.0 KiB | 00m00s [ 10/355] freeglut-devel-0:3.4.0-4.fc39 100% | 45.6 MiB/s | 886.5 KiB | 00m00s [ 11/355] f2c-0:20210928-6.fc39.aarch64 100% | 6.5 MiB/s | 317.2 KiB | 00m00s [ 12/355] cmake-0:3.27.7-1.fc40.aarch64 100% | 65.1 MiB/s | 7.4 MiB | 00m00s [ 13/355] google-cpu_features-devel-0:0 100% | 879.1 KiB/s | 14.9 KiB | 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make-1:4.4.1-2.fc39.aarch64 100% | 35.3 MiB/s | 577.5 KiB | 00m00s [257/355] default-fonts-core-sans-0:4.0 100% | 8.3 MiB/s | 25.4 KiB | 00m00s [258/355] xml-common-0:0.6.3-62.fc40.no 100% | 7.6 MiB/s | 31.0 KiB | 00m00s [259/355] m4-0:1.4.19-7.fc40.aarch64 100% | 71.2 MiB/s | 291.5 KiB | 00m00s [260/355] emacs-filesystem-1:29.1-15.fc 100% | 2.4 MiB/s | 7.5 KiB | 00m00s [261/355] abattis-cantarell-vf-fonts-0: 100% | 29.4 MiB/s | 120.6 KiB | 00m00s [262/355] google-noto-sans-vf-fonts-0:2 100% | 94.9 MiB/s | 583.4 KiB | 00m00s [263/355] avahi-libs-0:0.8-24.fc39.aarc 100% | 13.0 MiB/s | 66.7 KiB | 00m00s [264/355] libuuid-devel-0:2.39.3-2.fc40 100% | 8.1 MiB/s | 24.7 KiB | 00m00s [265/355] f2c-libs-0:20210928-6.fc39.aa 100% | 2.8 MiB/s | 63.6 KiB | 00m00s [266/355] cppunit-0:1.15.1-17.fc40.aarc 100% | 16.5 MiB/s | 135.3 KiB | 00m00s [267/355] jsoncpp-0:1.9.5-5.fc39.aarch6 100% | 17.9 MiB/s | 91.4 KiB | 00m00s [268/355] cmake-data-0:3.27.7-1.fc40.no 100% | 133.7 MiB/s | 1.7 MiB | 00m00s 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1.2 MiB | 00m00s [282/355] urw-base35-bookman-fonts-0:20 100% | 103.4 MiB/s | 847.3 KiB | 00m00s [283/355] urw-base35-d050000l-fonts-0:2 100% | 12.4 MiB/s | 76.1 KiB | 00m00s [284/355] urw-base35-c059-fonts-0:20200 100% | 94.9 MiB/s | 874.4 KiB | 00m00s [285/355] urw-base35-fonts-common-0:202 100% | 6.9 MiB/s | 21.2 KiB | 00m00s [286/355] urw-base35-gothic-fonts-0:202 100% | 89.7 MiB/s | 642.9 KiB | 00m00s [287/355] urw-base35-nimbus-mono-ps-fon 100% | 86.3 MiB/s | 795.1 KiB | 00m00s [288/355] urw-base35-nimbus-roman-fonts 100% | 92.9 MiB/s | 856.3 KiB | 00m00s [289/355] urw-base35-nimbus-sans-fonts- 100% | 118.3 MiB/s | 1.3 MiB | 00m00s [290/355] urw-base35-standard-symbols-p 100% | 8.2 MiB/s | 41.9 KiB | 00m00s [291/355] urw-base35-p052-fonts-0:20200 100% | 86.4 MiB/s | 973.6 KiB | 00m00s [292/355] urw-base35-z003-fonts-0:20200 100% | 53.9 MiB/s | 275.9 KiB | 00m00s [293/355] libb2-0:0.98.1-9.fc39.aarch64 100% | 4.7 MiB/s | 24.1 KiB | 00m00s [294/355] mpdecimal-0:2.5.1-7.fc39.aarc 100% | 21.9 MiB/s | 89.6 KiB | 00m00s [295/355] tzdata-0:2023d-2.fc40.noarch 100% | 70.6 MiB/s | 433.6 KiB | 00m00s [296/355] python-pip-wheel-0:23.3.1-3.f 100% | 147.0 MiB/s | 1.5 MiB | 00m00s [297/355] perl-mro-0:1.28-504.fc40.aarc 100% | 4.7 MiB/s | 28.9 KiB | 00m00s [298/355] perl-overloading-0:0.02-504.f 100% | 3.2 MiB/s | 13.2 KiB | 00m00s [299/355] perl-Pod-Perldoc-0:3.28.01-50 100% | 19.6 MiB/s | 80.1 KiB | 00m00s [300/355] perl-podlators-1:5.01-500.fc3 100% | 29.4 MiB/s | 120.5 KiB | 00m00s [301/355] perl-File-Temp-1:0.231.100-50 100% | 19.2 MiB/s | 58.9 KiB | 00m00s [302/355] groff-base-0:1.23.0-4.fc40.aa 100% | 135.1 MiB/s | 1.1 MiB | 00m00s [303/355] perl-HTTP-Tiny-0:0.088-3.fc39 100% | 9.0 MiB/s | 55.5 KiB | 00m00s [304/355] perl-IPC-Open3-0:1.22-504.fc4 100% | 4.3 MiB/s | 22.1 KiB | 00m00s [305/355] perl-Pod-Simple-1:3.45-4.fc39 100% | 50.9 MiB/s | 208.5 KiB | 00m00s [306/355] perl-POSIX-0:2.13-504.fc40.aa 100% | 23.9 MiB/s | 97.8 KiB | 00m00s [307/355] perl-IO-Socket-SSL-0:2.084-1. 100% | 54.0 MiB/s | 221.2 KiB | 00m00s [308/355] perl-Mozilla-CA-0:20231213-1. 100% | 4.5 MiB/s | 13.8 KiB | 00m00s [309/355] perl-Net-SSLeay-0:1.94-1.fc40 100% | 70.9 MiB/s | 362.8 KiB | 00m00s [310/355] perl-Time-Local-2:1.350-3.fc3 100% | 8.4 MiB/s | 34.3 KiB | 00m00s [311/355] libXau-devel-0:1.0.11-4.fc40. 100% | 4.4 MiB/s | 13.5 KiB | 00m00s [312/355] libwacom-data-0:2.9.0-1.fc40. 100% | 28.8 MiB/s | 118.1 KiB | 00m00s [313/355] gc-0:8.2.2-4.fc39.aarch64 100% | 21.4 MiB/s | 109.6 KiB | 00m00s [314/355] netpbm-0:11.02.00-5.fc40.aarc 100% | 30.0 MiB/s | 184.4 KiB | 00m00s [315/355] google-noto-fonts-common-0:20 100% | 4.2 MiB/s | 17.3 KiB | 00m00s [316/355] nettle-0:3.9.1-2.fc39.aarch64 100% | 70.7 MiB/s | 434.2 KiB | 00m00s [317/355] libxcrypt-devel-0:4.4.36-4.fc 100% | 5.7 MiB/s | 29.0 KiB | 00m00s [318/355] guile22-0:2.2.7-9.fc39.aarch6 100% | 213.8 MiB/s | 6.4 MiB | 00m00s [319/355] libXpm-0:3.5.17-1.fc40.aarch6 100% | 6.9 MiB/s | 63.8 KiB | 00m00s 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| 00m00s [333/355] perl-AutoLoader-0:5.74-504.fc 100% | 5.3 MiB/s | 21.5 KiB | 00m00s [334/355] perl-IO-Socket-IP-0:0.42-1.fc 100% | 10.2 MiB/s | 41.6 KiB | 00m00s [335/355] perl-URI-0:5.21-1.fc40.noarch 100% | 27.5 MiB/s | 112.5 KiB | 00m00s [336/355] crypto-policies-scripts-0:202 100% | 25.6 MiB/s | 104.7 KiB | 00m00s [337/355] nss-sysinit-0:3.96.1-1.fc40.a 100% | 4.5 MiB/s | 18.5 KiB | 00m00s [338/355] nss-util-0:3.96.1-1.fc40.aarc 100% | 21.0 MiB/s | 86.1 KiB | 00m00s [339/355] nss-softokn-0:3.96.1-1.fc40.a 100% | 67.1 MiB/s | 412.0 KiB | 00m00s [340/355] perl-Data-Dumper-0:2.188-501. 100% | 13.4 MiB/s | 55.0 KiB | 00m00s [341/355] perl-libnet-0:3.15-501.fc39.n 100% | 29.9 MiB/s | 122.5 KiB | 00m00s [342/355] perl-B-0:1.88-504.fc40.aarch6 100% | 34.9 MiB/s | 178.5 KiB | 00m00s [343/355] perl-Digest-MD5-0:2.59-1.fc40 100% | 11.7 MiB/s | 36.1 KiB | 00m00s [344/355] nss-softokn-freebl-0:3.96.1-1 100% | 64.6 MiB/s | 331.0 KiB | 00m00s [345/355] perl-FileHandle-0:2.05-504.fc 100% | 5.1 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libxslt-0:1.1.39-1 100% | 282.8 MiB/s | 868.7 KiB | 00m00s [ 28/357] Installing libtool-ltdl-0:2.4 100% | 218.0 MiB/s | 223.3 KiB | 00m00s [ 29/357] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 30/357] Installing mesa-libGLU-0:9.0. 100% | 385.2 MiB/s | 394.4 KiB | 00m00s [ 31/357] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [ 32/357] Installing m4-0:1.4.19-7.fc40 100% | 59.9 MiB/s | 674.9 KiB | 00m00s >>> Running pre-install scriptlet: xml-common-0:0.6.3-62.fc40.noarch >>> Stop pre-install scriptlet: xml-common-0:0.6.3-62.fc40.noarch [ 33/357] Installing xml-common-0:0.6.3 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [ 34/357] Installing xorg-x11-proto-dev 100% | 159.7 MiB/s | 1.8 MiB | 00m00s [ 35/357] Installing kernel-headers-0:6 100% | 152.9 MiB/s | 6.3 MiB | 00m00s [ 36/357] Installing libxcrypt-devel-0: 100% | 15.9 MiB/s | 32.6 KiB | 00m00s [ 37/357] Installing glibc-devel-0:2.38 100% | 124.8 MiB/s | 2.2 MiB | 00m00s [ 38/357] Installing 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trigger-install scriptlet: shared-mime-info-0:2.3-2.fc40.aarch64 >>> Running trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-6.fc40.aarch64 >>> Stop trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-6.fc40.aarch64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.aarch64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-1.fc40.aarch64 >>> Running trigger-install scriptlet: graphviz-0:9.0.0-8.fc40.aarch64 >>> Stop trigger-install scriptlet: graphviz-0:9.0.0-8.fc40.aarch64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-9.fc39.aarch64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-9.fc39.aarch64 Warning: skipped PGP checks for 355 package(s). Finish: build setup for COPASI-4.42.284-5.fc40.src.rpm Start: rpmbuild COPASI-4.42.284-5.fc40.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1705881600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DHbxwj + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf COPASI-Build-284 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/COPASI-Build-284.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd COPASI-Build-284 + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -f license.txt ++ find copasi -type f '(' -name '*.cpp' ')' + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + touch -r copasi/xml/parser/UnsupportedAnnotationHandler.cpp copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new + mv copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + touch -r copasi/xml/parser/UnitDefinitionHandler.cpp copasi/xml/parser/UnitDefinitionHandler.cpp.new + mv copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + touch -r copasi/xml/parser/UNKNOWNHandler.cpp copasi/xml/parser/UNKNOWNHandler.cpp.new + mv copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + touch -r copasi/xml/parser/TextGlyphHandler.cpp copasi/xml/parser/TextGlyphHandler.cpp.new + mv copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + touch -r copasi/xml/parser/TaskHandler.cpp copasi/xml/parser/TaskHandler.cpp.new + mv copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + touch -r copasi/xml/parser/TableHandler.cpp copasi/xml/parser/TableHandler.cpp.new + mv copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + touch -r copasi/xml/parser/SubstrateHandler.cpp copasi/xml/parser/SubstrateHandler.cpp.new + mv copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + touch -r copasi/xml/parser/StyleHandler.cpp copasi/xml/parser/StyleHandler.cpp.new + mv copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + touch -r copasi/xml/parser/StateTemplateVariableHandler.cpp copasi/xml/parser/StateTemplateVariableHandler.cpp.new + mv copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + touch -r copasi/xml/parser/StateTemplateHandler.cpp copasi/xml/parser/StateTemplateHandler.cpp.new + mv copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + touch -r copasi/xml/parser/SourceParameterHandler.cpp copasi/xml/parser/SourceParameterHandler.cpp.new + mv copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + touch -r copasi/xml/parser/SliderHandler.cpp copasi/xml/parser/SliderHandler.cpp.new + mv copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + touch -r copasi/xml/parser/SBMLMapHandler.cpp copasi/xml/parser/SBMLMapHandler.cpp.new + mv copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + touch -r copasi/xml/parser/ReportTargetHandler.cpp copasi/xml/parser/ReportTargetHandler.cpp.new + mv copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + touch -r copasi/xml/parser/ReportSectionHandler.cpp copasi/xml/parser/ReportSectionHandler.cpp.new + mv copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + touch -r copasi/xml/parser/ReportDefinitionHandler.cpp copasi/xml/parser/ReportDefinitionHandler.cpp.new + mv copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + touch -r copasi/xml/parser/RenderTextHandler.cpp copasi/xml/parser/RenderTextHandler.cpp.new + mv copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + touch -r copasi/xml/parser/RenderInformationHandler.cpp copasi/xml/parser/RenderInformationHandler.cpp.new + mv copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + touch -r copasi/xml/parser/RenderCurveHandler.cpp copasi/xml/parser/RenderCurveHandler.cpp.new + mv copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + touch -r copasi/xml/parser/RenderCurveElementHandler.cpp copasi/xml/parser/RenderCurveElementHandler.cpp.new + mv copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + touch -r copasi/xml/parser/RectangleHandler.cpp copasi/xml/parser/RectangleHandler.cpp.new + mv copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + touch -r copasi/xml/parser/ReactionHandler.cpp copasi/xml/parser/ReactionHandler.cpp.new + mv copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + touch -r copasi/xml/parser/ReactionGlyphHandler.cpp copasi/xml/parser/ReactionGlyphHandler.cpp.new + mv copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + touch -r copasi/xml/parser/RadialGradientHandler.cpp copasi/xml/parser/RadialGradientHandler.cpp.new + mv copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + touch -r copasi/xml/parser/ProductHandler.cpp copasi/xml/parser/ProductHandler.cpp.new + mv copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + touch -r copasi/xml/parser/PolygonHandler.cpp copasi/xml/parser/PolygonHandler.cpp.new + mv copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + touch -r copasi/xml/parser/PointHandler.cpp copasi/xml/parser/PointHandler.cpp.new + mv copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + touch -r copasi/xml/parser/PlotSpecificationHandler.cpp copasi/xml/parser/PlotSpecificationHandler.cpp.new + mv copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + touch -r copasi/xml/parser/PlotItemHandler.cpp copasi/xml/parser/PlotItemHandler.cpp.new + mv copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + touch -r copasi/xml/parser/ParameterTextHandler.cpp copasi/xml/parser/ParameterTextHandler.cpp.new + mv copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + touch -r copasi/xml/parser/ParameterHandler.cpp copasi/xml/parser/ParameterHandler.cpp.new + mv copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + touch -r copasi/xml/parser/ParameterGroupHandler.cpp copasi/xml/parser/ParameterGroupHandler.cpp.new + mv copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + touch -r copasi/xml/parser/ParameterDescriptionHandler.cpp copasi/xml/parser/ParameterDescriptionHandler.cpp.new + mv copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + touch -r copasi/xml/parser/ObjectHandler.cpp copasi/xml/parser/ObjectHandler.cpp.new + mv copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + touch -r copasi/xml/parser/ModifierHandler.cpp copasi/xml/parser/ModifierHandler.cpp.new + mv copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + touch -r copasi/xml/parser/ModelValueHandler.cpp copasi/xml/parser/ModelValueHandler.cpp.new + mv copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + touch -r copasi/xml/parser/ModelParameterSetHandler.cpp copasi/xml/parser/ModelParameterSetHandler.cpp.new + mv copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + touch -r copasi/xml/parser/ModelParameterHandler.cpp copasi/xml/parser/ModelParameterHandler.cpp.new + mv copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + touch -r copasi/xml/parser/ModelParameterGroupHandler.cpp copasi/xml/parser/ModelParameterGroupHandler.cpp.new + mv copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + touch -r copasi/xml/parser/ModelHandler.cpp copasi/xml/parser/ModelHandler.cpp.new + mv copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + touch -r copasi/xml/parser/MiriamAnnotationHandler.cpp copasi/xml/parser/MiriamAnnotationHandler.cpp.new + mv copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + touch -r copasi/xml/parser/MethodHandler.cpp copasi/xml/parser/MethodHandler.cpp.new + mv copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + touch -r copasi/xml/parser/MetaboliteHandler.cpp copasi/xml/parser/MetaboliteHandler.cpp.new + mv copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteGlyphHandler.cpp copasi/xml/parser/MetaboliteGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + touch -r copasi/xml/parser/MathMLHandler.cpp copasi/xml/parser/MathMLHandler.cpp.new + mv copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + touch -r copasi/xml/parser/ListOfLayoutsHandler.cpp copasi/xml/parser/ListOfLayoutsHandler.cpp.new + mv copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + touch -r copasi/xml/parser/ListOfHandler.cpp copasi/xml/parser/ListOfHandler.cpp.new + mv copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + touch -r copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new + mv copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + touch -r copasi/xml/parser/ListOfCurveSegmentsHandler.cpp copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new + mv copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + touch -r copasi/xml/parser/LinearGradientHandler.cpp copasi/xml/parser/LinearGradientHandler.cpp.new + mv copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + touch -r copasi/xml/parser/LineSegmentHandler.cpp copasi/xml/parser/LineSegmentHandler.cpp.new + mv copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + touch -r copasi/xml/parser/LineEndingHandler.cpp copasi/xml/parser/LineEndingHandler.cpp.new + mv copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + touch -r copasi/xml/parser/LayoutHandler.cpp copasi/xml/parser/LayoutHandler.cpp.new + mv copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + touch -r copasi/xml/parser/KineticLawHandler.cpp copasi/xml/parser/KineticLawHandler.cpp.new + mv copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + touch -r copasi/xml/parser/InitialStateHandler.cpp copasi/xml/parser/InitialStateHandler.cpp.new + mv copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + touch -r copasi/xml/parser/ImageHandler.cpp copasi/xml/parser/ImageHandler.cpp.new + mv copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + touch -r copasi/xml/parser/GroupHandler.cpp copasi/xml/parser/GroupHandler.cpp.new + mv copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + touch -r copasi/xml/parser/GradientStopHandler.cpp copasi/xml/parser/GradientStopHandler.cpp.new + mv copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + touch -r copasi/xml/parser/GUIHandler.cpp copasi/xml/parser/GUIHandler.cpp.new + mv copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + touch -r copasi/xml/parser/FunctionHandler.cpp copasi/xml/parser/FunctionHandler.cpp.new + mv copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + touch -r copasi/xml/parser/EventHandler.cpp copasi/xml/parser/EventHandler.cpp.new + mv copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + touch -r copasi/xml/parser/EllipseHandler.cpp copasi/xml/parser/EllipseHandler.cpp.new + mv copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + touch -r copasi/xml/parser/DimensionsHandler.cpp copasi/xml/parser/DimensionsHandler.cpp.new + mv copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + touch -r copasi/xml/parser/CurveHandler.cpp copasi/xml/parser/CurveHandler.cpp.new + mv copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + touch -r copasi/xml/parser/CubicBezierHandler.cpp copasi/xml/parser/CubicBezierHandler.cpp.new + mv copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + touch -r copasi/xml/parser/ConstantHandler.cpp copasi/xml/parser/ConstantHandler.cpp.new + mv copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + touch -r copasi/xml/parser/CompartmentHandler.cpp copasi/xml/parser/CompartmentHandler.cpp.new + mv copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + touch -r copasi/xml/parser/CompartmentGlyphHandler.cpp copasi/xml/parser/CompartmentGlyphHandler.cpp.new + mv copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + touch -r copasi/xml/parser/CommentHandler.cpp copasi/xml/parser/CommentHandler.cpp.new + mv copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + touch -r copasi/xml/parser/ColorDefinitionHandler.cpp copasi/xml/parser/ColorDefinitionHandler.cpp.new + mv copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + touch -r copasi/xml/parser/CharacterDataHandler.cpp copasi/xml/parser/CharacterDataHandler.cpp.new + mv copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + touch -r copasi/xml/parser/ChannelSpecHandler.cpp copasi/xml/parser/ChannelSpecHandler.cpp.new + mv copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + touch -r copasi/xml/parser/CallParameterHandler.cpp copasi/xml/parser/CallParameterHandler.cpp.new + mv copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + touch -r copasi/xml/parser/CXMLParserData.cpp copasi/xml/parser/CXMLParserData.cpp.new + mv copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + touch -r copasi/xml/parser/CXMLParser.cpp copasi/xml/parser/CXMLParser.cpp.new + mv copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + touch -r copasi/xml/parser/CXMLHandlerFactory.cpp copasi/xml/parser/CXMLHandlerFactory.cpp.new + mv copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + touch -r copasi/xml/parser/CXMLHandler.cpp copasi/xml/parser/CXMLHandler.cpp.new + mv copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + touch -r copasi/xml/parser/COPASIHandler.cpp copasi/xml/parser/COPASIHandler.cpp.new + mv copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + touch -r copasi/xml/parser/BoundingBoxHandler.cpp copasi/xml/parser/BoundingBoxHandler.cpp.new + mv copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + touch -r copasi/xml/parser/AssignmentHandler.cpp copasi/xml/parser/AssignmentHandler.cpp.new + mv copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + touch -r copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new + mv copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + touch -r copasi/xml/CFixLocalReactionParameters.cpp copasi/xml/CFixLocalReactionParameters.cpp.new + mv copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + touch -r copasi/xml/CExpat.cpp copasi/xml/CExpat.cpp.new + mv copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + touch -r copasi/xml/CCopasiXMLInterface.cpp copasi/xml/CCopasiXMLInterface.cpp.new + mv copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + touch -r copasi/xml/CCopasiXML.cpp copasi/xml/CCopasiXML.cpp.new + mv copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + touch -r copasi/wizard/wizard.cpp copasi/wizard/wizard.cpp.new + mv copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + touch -r copasi/versioningUI/CQModelVersionHierarchyDM.cpp copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new + mv copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + touch -r copasi/versioningUI/CCreateModelVersionDialog.cpp copasi/versioningUI/CCreateModelVersionDialog.cpp.new + mv copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + touch -r copasi/versioningUI/CBrowseModelVersionDialog.cpp copasi/versioningUI/CBrowseModelVersionDialog.cpp.new + mv copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + touch -r copasi/versioning/CVCard.cpp copasi/versioning/CVCard.cpp.new + mv copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + touch -r copasi/versioning/CModelVersionHierarchy.cpp copasi/versioning/CModelVersionHierarchy.cpp.new + mv copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + touch -r copasi/versioning/CModelVersion.cpp copasi/versioning/CModelVersion.cpp.new + mv copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + touch -r copasi/utilities/utility.cpp copasi/utilities/utility.cpp.new + mv copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + touch -r copasi/utilities/dgemm.cpp copasi/utilities/dgemm.cpp.new + mv copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + touch -r copasi/utilities/CopasiTime.cpp copasi/utilities/CopasiTime.cpp.new + mv copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + touch -r copasi/utilities/Cmd5.cpp copasi/utilities/Cmd5.cpp.new + mv copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + touch -r copasi/utilities/CluX.cpp copasi/utilities/CluX.cpp.new + mv copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + touch -r copasi/utilities/CVersion.cpp copasi/utilities/CVersion.cpp.new + mv copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + touch -r copasi/utilities/CValidity.cpp copasi/utilities/CValidity.cpp.new + mv copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + touch -r copasi/utilities/CValidatedUnit.cpp copasi/utilities/CValidatedUnit.cpp.new + mv copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + touch -r copasi/utilities/CUnitValidator.cpp copasi/utilities/CUnitValidator.cpp.new + mv copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + touch -r copasi/utilities/CUnitParser_yacc.cpp copasi/utilities/CUnitParser_yacc.cpp.new + mv copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + touch -r copasi/utilities/CUnitParser_lex.cpp copasi/utilities/CUnitParser_lex.cpp.new + mv copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + touch -r copasi/utilities/CUnitParser.cpp copasi/utilities/CUnitParser.cpp.new + mv copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + touch -r copasi/utilities/CUnitDefinitionDB.cpp copasi/utilities/CUnitDefinitionDB.cpp.new + mv copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + touch -r copasi/utilities/CUnitDefinition.cpp copasi/utilities/CUnitDefinition.cpp.new + mv copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + touch -r copasi/utilities/CUnitComponent.cpp copasi/utilities/CUnitComponent.cpp.new + mv copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + touch -r copasi/utilities/CUnit.cpp copasi/utilities/CUnit.cpp.new + mv copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + touch -r copasi/utilities/CTaskFactory.cpp copasi/utilities/CTaskFactory.cpp.new + mv copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + touch -r copasi/utilities/CTaskEnum.cpp copasi/utilities/CTaskEnum.cpp.new + mv copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + touch -r copasi/utilities/CTableCell.cpp copasi/utilities/CTableCell.cpp.new + mv copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + touch -r copasi/utilities/CSparseMatrix.cpp copasi/utilities/CSparseMatrix.cpp.new + mv copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + touch -r copasi/utilities/CSlider.cpp copasi/utilities/CSlider.cpp.new + mv copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + touch -r copasi/utilities/CReadConfig.cpp copasi/utilities/CReadConfig.cpp.new + mv copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + touch -r copasi/utilities/CProcessReport.cpp copasi/utilities/CProcessReport.cpp.new + mv copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + touch -r copasi/utilities/CProblemFactory.cpp copasi/utilities/CProblemFactory.cpp.new + mv copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + touch -r copasi/utilities/CParameterEstimationUtils.cpp copasi/utilities/CParameterEstimationUtils.cpp.new + mv copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + touch -r copasi/utilities/CMethodFactory.cpp copasi/utilities/CMethodFactory.cpp.new + mv copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + touch -r copasi/utilities/CLinkMatrix.cpp copasi/utilities/CLinkMatrix.cpp.new + mv copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + touch -r copasi/utilities/CLeastSquareSolution.cpp copasi/utilities/CLeastSquareSolution.cpp.new + mv copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + touch -r copasi/utilities/CIndexedPriorityQueue.cpp copasi/utilities/CIndexedPriorityQueue.cpp.new + mv copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + touch -r copasi/utilities/CExpressionGenerator.cpp copasi/utilities/CExpressionGenerator.cpp.new + mv copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + touch -r copasi/utilities/CDirEntry.cpp copasi/utilities/CDirEntry.cpp.new + mv copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + touch -r copasi/utilities/CDependencyGraph.cpp copasi/utilities/CDependencyGraph.cpp.new + mv copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + touch -r copasi/utilities/CCopasiTaskStatus.cpp copasi/utilities/CCopasiTaskStatus.cpp.new + mv copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + touch -r copasi/utilities/CCopasiTask.cpp copasi/utilities/CCopasiTask.cpp.new + mv copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + touch -r copasi/utilities/CCopasiProblem.cpp copasi/utilities/CCopasiProblem.cpp.new + mv copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + touch -r copasi/utilities/CCopasiParameterGroup.cpp copasi/utilities/CCopasiParameterGroup.cpp.new + mv copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + touch -r copasi/utilities/CCopasiParameter.cpp copasi/utilities/CCopasiParameter.cpp.new + mv copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + touch -r copasi/utilities/CCopasiMethod.cpp copasi/utilities/CCopasiMethod.cpp.new + mv copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + touch -r copasi/utilities/CCopasiMessage.cpp copasi/utilities/CCopasiMessage.cpp.new + mv copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + touch -r copasi/utilities/CCopasiException.cpp copasi/utilities/CCopasiException.cpp.new + mv copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + touch -r copasi/utilities/CBrent.cpp copasi/utilities/CBrent.cpp.new + mv copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + touch -r copasi/utilities/CBaseUnit.cpp copasi/utilities/CBaseUnit.cpp.new + mv copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + touch -r copasi/undoUI/CQUndoDialog.cpp copasi/undoUI/CQUndoDialog.cpp.new + mv copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + touch -r copasi/undoUI/CQUndoDM.cpp copasi/undoUI/CQUndoDM.cpp.new + mv copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + touch -r copasi/undo/CUndoStack.cpp copasi/undo/CUndoStack.cpp.new + mv copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + touch -r copasi/undo/CUndoObjectInterface.cpp copasi/undo/CUndoObjectInterface.cpp.new + mv copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + touch -r copasi/undo/CUndoData.cpp copasi/undo/CUndoData.cpp.new + mv copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + touch -r copasi/undo/CDataValue.cpp copasi/undo/CDataValue.cpp.new + mv copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CData.cpp.new copasi/undo/CData.cpp + touch -r copasi/undo/CData.cpp copasi/undo/CData.cpp.new + mv copasi/undo/CData.cpp.new copasi/undo/CData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + touch -r copasi/tssanalysis/CTSSATask.cpp copasi/tssanalysis/CTSSATask.cpp.new + mv copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + touch -r copasi/tssanalysis/CTSSAProblem.cpp copasi/tssanalysis/CTSSAProblem.cpp.new + mv copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + touch -r copasi/tssanalysis/CTSSAMethod.cpp copasi/tssanalysis/CTSSAMethod.cpp.new + mv copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + touch -r copasi/tssanalysis/CILDMModifiedMethod.cpp copasi/tssanalysis/CILDMModifiedMethod.cpp.new + mv copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + touch -r copasi/tssanalysis/CILDMMethod.cpp copasi/tssanalysis/CILDMMethod.cpp.new + mv copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + touch -r copasi/tssanalysis/CCSPMethod.cpp copasi/tssanalysis/CCSPMethod.cpp.new + mv copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + touch -r copasi/tss/CODEExporterXPPAUT.cpp copasi/tss/CODEExporterXPPAUT.cpp.new + mv copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + touch -r copasi/tss/CODEExporterC.cpp copasi/tss/CODEExporterC.cpp.new + mv copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + touch -r copasi/tss/CODEExporterBM.cpp copasi/tss/CODEExporterBM.cpp.new + mv copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + touch -r copasi/tss/CODEExporter.cpp copasi/tss/CODEExporter.cpp.new + mv copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + touch -r copasi/trajectory/CTrajectoryTask.cpp copasi/trajectory/CTrajectoryTask.cpp.new + mv copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + touch -r copasi/trajectory/CTrajectoryProblem.cpp copasi/trajectory/CTrajectoryProblem.cpp.new + mv copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + touch -r copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new + mv copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + touch -r copasi/trajectory/CTrajectoryMethod.cpp copasi/trajectory/CTrajectoryMethod.cpp.new + mv copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + touch -r copasi/trajectory/CTrajAdaptiveSA.cpp copasi/trajectory/CTrajAdaptiveSA.cpp.new + mv copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + touch -r copasi/trajectory/CTimeSeries.cpp copasi/trajectory/CTimeSeries.cpp.new + mv copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + touch -r copasi/trajectory/CTauLeapMethod.cpp copasi/trajectory/CTauLeapMethod.cpp.new + mv copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + touch -r copasi/trajectory/CStochasticRungeKuttaRI5.cpp copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new + mv copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + touch -r copasi/trajectory/CStochNextReactionMethod.cpp copasi/trajectory/CStochNextReactionMethod.cpp.new + mv copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + touch -r copasi/trajectory/CStochMethod.cpp copasi/trajectory/CStochMethod.cpp.new + mv copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + touch -r copasi/trajectory/CStochDirectMethod.cpp copasi/trajectory/CStochDirectMethod.cpp.new + mv copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + touch -r copasi/trajectory/CRungeKutta.cpp copasi/trajectory/CRungeKutta.cpp.new + mv copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + touch -r copasi/trajectory/CRootFinder.cpp copasi/trajectory/CRootFinder.cpp.new + mv copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + touch -r copasi/trajectory/CRadau5Method.cpp copasi/trajectory/CRadau5Method.cpp.new + mv copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + touch -r copasi/trajectory/CLsodaMethod2.cpp copasi/trajectory/CLsodaMethod2.cpp.new + mv copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + touch -r copasi/trajectory/CLsodaMethod.cpp copasi/trajectory/CLsodaMethod.cpp.new + mv copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionRKMethod.cpp copasi/trajectory/CHybridNextReactionRKMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionLSODAMethod.cpp copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + touch -r copasi/trajectory/CHybridMethodODE45.cpp copasi/trajectory/CHybridMethodODE45.cpp.new + mv copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + touch -r copasi/trajectory/CHybridMethod.cpp copasi/trajectory/CHybridMethod.cpp.new + mv copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + touch -r copasi/timesens/CTimeSensTask.cpp copasi/timesens/CTimeSensTask.cpp.new + mv copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + touch -r copasi/timesens/CTimeSensProblem.cpp copasi/timesens/CTimeSensProblem.cpp.new + mv copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + touch -r copasi/timesens/CTimeSensMethod.cpp copasi/timesens/CTimeSensMethod.cpp.new + mv copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + touch -r copasi/timesens/CTimeSensLsodaMethod.cpp copasi/timesens/CTimeSensLsodaMethod.cpp.new + mv copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + touch -r copasi/tex/CStructureParser.cpp copasi/tex/CStructureParser.cpp.new + mv copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + touch -r copasi/tex/CMathMLToTeX.cpp copasi/tex/CMathMLToTeX.cpp.new + mv copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/test.cpp.new copasi/test2/test.cpp + touch -r copasi/test2/test.cpp copasi/test2/test.cpp.new + mv copasi/test2/test.cpp.new copasi/test2/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + touch -r copasi/test2/CNormalTranslation.cpp copasi/test2/CNormalTranslation.cpp.new + mv copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + touch -r copasi/test2/CNormalSum.cpp copasi/test2/CNormalSum.cpp.new + mv copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + touch -r copasi/test2/CNormalProduct.cpp copasi/test2/CNormalProduct.cpp.new + mv copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + touch -r copasi/test2/CNormalLcm.cpp copasi/test2/CNormalLcm.cpp.new + mv copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + touch -r copasi/test2/CNormalItemPower.cpp copasi/test2/CNormalItemPower.cpp.new + mv copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + touch -r copasi/test2/CNormalItem.cpp copasi/test2/CNormalItem.cpp.new + mv copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + touch -r copasi/test2/CNormalFraction.cpp copasi/test2/CNormalFraction.cpp.new + mv copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test/test.cpp.new copasi/test/test.cpp + touch -r copasi/test/test.cpp copasi/test/test.cpp.new + mv copasi/test/test.cpp.new copasi/test/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + touch -r copasi/steadystate/CSteadyStateTask.cpp copasi/steadystate/CSteadyStateTask.cpp.new + mv copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + touch -r copasi/steadystate/CSteadyStateProblem.cpp copasi/steadystate/CSteadyStateProblem.cpp.new + mv copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + touch -r copasi/steadystate/CSteadyStateMethod.cpp copasi/steadystate/CSteadyStateMethod.cpp.new + mv copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + touch -r copasi/steadystate/CNewtonMethod.cpp copasi/steadystate/CNewtonMethod.cpp.new + mv copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + touch -r copasi/steadystate/CMCATask.cpp copasi/steadystate/CMCATask.cpp.new + mv copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + touch -r copasi/steadystate/CMCAProblem.cpp copasi/steadystate/CMCAProblem.cpp.new + mv copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + touch -r copasi/steadystate/CMCAMethod.cpp copasi/steadystate/CMCAMethod.cpp.new + mv copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + touch -r copasi/steadystate/CEigen.cpp copasi/steadystate/CEigen.cpp.new + mv copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + touch -r copasi/sensitivities/CSensTask.cpp copasi/sensitivities/CSensTask.cpp.new + mv copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + touch -r copasi/sensitivities/CSensProblem.cpp copasi/sensitivities/CSensProblem.cpp.new + mv copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + touch -r copasi/sensitivities/CSensMethod.cpp copasi/sensitivities/CSensMethod.cpp.new + mv copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + touch -r copasi/sedml/SEDMLUtils.cpp copasi/sedml/SEDMLUtils.cpp.new + mv copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + touch -r copasi/sedml/SEDMLImporter.cpp copasi/sedml/SEDMLImporter.cpp.new + mv copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + touch -r copasi/sedml/CSEDMLExporter.cpp copasi/sedml/CSEDMLExporter.cpp.new + mv copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + touch -r copasi/scan/CScanTask.cpp copasi/scan/CScanTask.cpp.new + mv copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + touch -r copasi/scan/CScanProblem.cpp copasi/scan/CScanProblem.cpp.new + mv copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + touch -r copasi/scan/CScanMethod.cpp copasi/scan/CScanMethod.cpp.new + mv copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + touch -r copasi/sbmlunit/Expression2PresentationMMLUnits.cpp copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new + mv copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + touch -r copasi/sbmlunit/Expression2PresentationMML.cpp copasi/sbmlunit/Expression2PresentationMML.cpp.new + mv copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + touch -r copasi/sbmlunit/CSBMLunitInterface.cpp copasi/sbmlunit/CSBMLunitInterface.cpp.new + mv copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + touch -r copasi/sbmlunit/CSBMLunit.cpp copasi/sbmlunit/CSBMLunit.cpp.new + mv copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + touch -r copasi/sbml/unittests/utilities.cpp copasi/sbml/unittests/utilities.cpp.new + mv copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + touch -r copasi/sbml/unittests/test000104.cpp copasi/sbml/unittests/test000104.cpp.new + mv copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + touch -r copasi/sbml/unittests/test000103.cpp copasi/sbml/unittests/test000103.cpp.new + mv copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + touch -r copasi/sbml/unittests/test000102.cpp copasi/sbml/unittests/test000102.cpp.new + mv copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + touch -r copasi/sbml/unittests/test000101.cpp copasi/sbml/unittests/test000101.cpp.new + mv copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + touch -r copasi/sbml/unittests/test000100.cpp copasi/sbml/unittests/test000100.cpp.new + mv copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + touch -r copasi/sbml/unittests/test000099.cpp copasi/sbml/unittests/test000099.cpp.new + mv copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + touch -r copasi/sbml/unittests/test000098.cpp copasi/sbml/unittests/test000098.cpp.new + mv copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + touch -r copasi/sbml/unittests/test000097.cpp copasi/sbml/unittests/test000097.cpp.new + mv copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + touch -r copasi/sbml/unittests/test000096.cpp copasi/sbml/unittests/test000096.cpp.new + mv copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + touch -r copasi/sbml/unittests/test000095.cpp copasi/sbml/unittests/test000095.cpp.new + mv copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + touch -r copasi/sbml/unittests/test000094.cpp copasi/sbml/unittests/test000094.cpp.new + mv copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + touch -r copasi/sbml/unittests/test000093.cpp copasi/sbml/unittests/test000093.cpp.new + mv copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + touch -r copasi/sbml/unittests/test000092.cpp copasi/sbml/unittests/test000092.cpp.new + mv copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + touch -r copasi/sbml/unittests/test000091.cpp copasi/sbml/unittests/test000091.cpp.new + mv copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + touch -r copasi/sbml/unittests/test000090.cpp copasi/sbml/unittests/test000090.cpp.new + mv copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + touch -r copasi/sbml/unittests/test000089.cpp copasi/sbml/unittests/test000089.cpp.new + mv copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + touch -r copasi/sbml/unittests/test000088.cpp copasi/sbml/unittests/test000088.cpp.new + mv copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + touch -r copasi/sbml/unittests/test000087.cpp copasi/sbml/unittests/test000087.cpp.new + mv copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + touch -r copasi/sbml/unittests/test000086.cpp copasi/sbml/unittests/test000086.cpp.new + mv copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + touch -r copasi/sbml/unittests/test000085.cpp copasi/sbml/unittests/test000085.cpp.new + mv copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + touch -r copasi/sbml/unittests/test000084.cpp copasi/sbml/unittests/test000084.cpp.new + mv copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + touch -r copasi/sbml/unittests/test000083.cpp copasi/sbml/unittests/test000083.cpp.new + mv copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + touch -r copasi/sbml/unittests/test000082.cpp copasi/sbml/unittests/test000082.cpp.new + mv copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + touch -r copasi/sbml/unittests/test000081.cpp copasi/sbml/unittests/test000081.cpp.new + mv copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + touch -r copasi/sbml/unittests/test000080.cpp copasi/sbml/unittests/test000080.cpp.new + mv copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + touch -r copasi/sbml/unittests/test000079.cpp copasi/sbml/unittests/test000079.cpp.new + mv copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + touch -r copasi/sbml/unittests/test000078.cpp copasi/sbml/unittests/test000078.cpp.new + mv copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + touch -r copasi/sbml/unittests/test000077.cpp copasi/sbml/unittests/test000077.cpp.new + mv copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + touch -r copasi/sbml/unittests/test000076.cpp copasi/sbml/unittests/test000076.cpp.new + mv copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + touch -r copasi/sbml/unittests/test000075.cpp copasi/sbml/unittests/test000075.cpp.new + mv copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + touch -r copasi/sbml/unittests/test000074.cpp copasi/sbml/unittests/test000074.cpp.new + mv copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + touch -r copasi/sbml/unittests/test000073.cpp copasi/sbml/unittests/test000073.cpp.new + mv copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + touch -r copasi/sbml/unittests/test000072.cpp copasi/sbml/unittests/test000072.cpp.new + mv copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + touch -r copasi/sbml/unittests/test000071.cpp copasi/sbml/unittests/test000071.cpp.new + mv copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + touch -r copasi/sbml/unittests/test000070.cpp copasi/sbml/unittests/test000070.cpp.new + mv copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + touch -r copasi/sbml/unittests/test000069.cpp copasi/sbml/unittests/test000069.cpp.new + mv copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + touch -r copasi/sbml/unittests/test000068.cpp copasi/sbml/unittests/test000068.cpp.new + mv copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + touch -r copasi/sbml/unittests/test000067.cpp copasi/sbml/unittests/test000067.cpp.new + mv copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + touch -r copasi/sbml/unittests/test000066.cpp copasi/sbml/unittests/test000066.cpp.new + mv copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + touch -r copasi/sbml/unittests/test000065.cpp copasi/sbml/unittests/test000065.cpp.new + mv copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + touch -r copasi/sbml/unittests/test000064.cpp copasi/sbml/unittests/test000064.cpp.new + mv copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + touch -r copasi/sbml/unittests/test000063.cpp copasi/sbml/unittests/test000063.cpp.new + mv copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + touch -r copasi/sbml/unittests/test000062.cpp copasi/sbml/unittests/test000062.cpp.new + mv copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + touch -r copasi/sbml/unittests/test000061.cpp copasi/sbml/unittests/test000061.cpp.new + mv copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + touch -r copasi/sbml/unittests/test000060.cpp copasi/sbml/unittests/test000060.cpp.new + mv copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + touch -r copasi/sbml/unittests/test000059.cpp copasi/sbml/unittests/test000059.cpp.new + mv copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + touch -r copasi/sbml/unittests/test000058.cpp copasi/sbml/unittests/test000058.cpp.new + mv copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + touch -r copasi/sbml/unittests/test000057.cpp copasi/sbml/unittests/test000057.cpp.new + mv copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + touch -r copasi/sbml/unittests/test000056.cpp copasi/sbml/unittests/test000056.cpp.new + mv copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + touch -r copasi/sbml/unittests/test000055.cpp copasi/sbml/unittests/test000055.cpp.new + mv copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + touch -r copasi/sbml/unittests/test000054.cpp copasi/sbml/unittests/test000054.cpp.new + mv copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + touch -r copasi/sbml/unittests/test000053.cpp copasi/sbml/unittests/test000053.cpp.new + mv copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + touch -r copasi/sbml/unittests/test000052.cpp copasi/sbml/unittests/test000052.cpp.new + mv copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + touch -r copasi/sbml/unittests/test000051.cpp copasi/sbml/unittests/test000051.cpp.new + mv copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + touch -r copasi/sbml/unittests/test000050.cpp copasi/sbml/unittests/test000050.cpp.new + mv copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + touch -r copasi/sbml/unittests/test000049.cpp copasi/sbml/unittests/test000049.cpp.new + mv copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + touch -r copasi/sbml/unittests/test000048.cpp copasi/sbml/unittests/test000048.cpp.new + mv copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + touch -r copasi/sbml/unittests/test000047.cpp copasi/sbml/unittests/test000047.cpp.new + mv copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + touch -r copasi/sbml/unittests/test000046.cpp copasi/sbml/unittests/test000046.cpp.new + mv copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + touch -r copasi/sbml/unittests/test000045.cpp copasi/sbml/unittests/test000045.cpp.new + mv copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + touch -r copasi/sbml/unittests/test000044.cpp copasi/sbml/unittests/test000044.cpp.new + mv copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + touch -r copasi/sbml/unittests/test000043.cpp copasi/sbml/unittests/test000043.cpp.new + mv copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + touch -r copasi/sbml/unittests/test000042.cpp copasi/sbml/unittests/test000042.cpp.new + mv copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + touch -r copasi/sbml/unittests/test000041.cpp copasi/sbml/unittests/test000041.cpp.new + mv copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + touch -r copasi/sbml/unittests/test000040.cpp copasi/sbml/unittests/test000040.cpp.new + mv copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + touch -r copasi/sbml/unittests/test000039.cpp copasi/sbml/unittests/test000039.cpp.new + mv copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + touch -r copasi/sbml/unittests/test000038.cpp copasi/sbml/unittests/test000038.cpp.new + mv copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + touch -r copasi/sbml/unittests/test000037.cpp copasi/sbml/unittests/test000037.cpp.new + mv copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + touch -r copasi/sbml/unittests/test000036.cpp copasi/sbml/unittests/test000036.cpp.new + mv copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + touch -r copasi/sbml/unittests/test000035.cpp copasi/sbml/unittests/test000035.cpp.new + mv copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + touch -r copasi/sbml/unittests/test000034.cpp copasi/sbml/unittests/test000034.cpp.new + mv copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + touch -r copasi/sbml/unittests/test000033.cpp copasi/sbml/unittests/test000033.cpp.new + mv copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + touch -r copasi/sbml/unittests/test000032.cpp copasi/sbml/unittests/test000032.cpp.new + mv copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + touch -r copasi/sbml/unittests/test000031.cpp copasi/sbml/unittests/test000031.cpp.new + mv copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + touch -r copasi/sbml/unittests/test000030.cpp copasi/sbml/unittests/test000030.cpp.new + mv copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + touch -r copasi/sbml/unittests/test000029.cpp copasi/sbml/unittests/test000029.cpp.new + mv copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + touch -r copasi/sbml/unittests/test000028.cpp copasi/sbml/unittests/test000028.cpp.new + mv copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + touch -r copasi/sbml/unittests/test000027.cpp copasi/sbml/unittests/test000027.cpp.new + mv copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + touch -r copasi/sbml/unittests/test000026.cpp copasi/sbml/unittests/test000026.cpp.new + mv copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + touch -r copasi/sbml/unittests/test000025.cpp copasi/sbml/unittests/test000025.cpp.new + mv copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + touch -r copasi/sbml/unittests/test000024.cpp copasi/sbml/unittests/test000024.cpp.new + mv copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + touch -r copasi/sbml/unittests/test000023.cpp copasi/sbml/unittests/test000023.cpp.new + mv copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + touch -r copasi/sbml/unittests/test000022.cpp copasi/sbml/unittests/test000022.cpp.new + mv copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + touch -r copasi/sbml/unittests/test000021.cpp copasi/sbml/unittests/test000021.cpp.new + mv copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + touch -r copasi/sbml/unittests/test000020.cpp copasi/sbml/unittests/test000020.cpp.new + mv copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + touch -r copasi/sbml/unittests/test000019.cpp copasi/sbml/unittests/test000019.cpp.new + mv copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + touch -r copasi/sbml/unittests/test000018.cpp copasi/sbml/unittests/test000018.cpp.new + mv copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + touch -r copasi/sbml/unittests/test000017.cpp copasi/sbml/unittests/test000017.cpp.new + mv copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + touch -r copasi/sbml/unittests/test000016.cpp copasi/sbml/unittests/test000016.cpp.new + mv copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + touch -r copasi/sbml/unittests/test000015.cpp copasi/sbml/unittests/test000015.cpp.new + mv copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + touch -r copasi/sbml/unittests/test000014.cpp copasi/sbml/unittests/test000014.cpp.new + mv copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + touch -r copasi/sbml/unittests/test000013.cpp copasi/sbml/unittests/test000013.cpp.new + mv copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + touch -r copasi/sbml/unittests/test000012.cpp copasi/sbml/unittests/test000012.cpp.new + mv copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + touch -r copasi/sbml/unittests/test000011.cpp copasi/sbml/unittests/test000011.cpp.new + mv copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + touch -r copasi/sbml/unittests/test000010.cpp copasi/sbml/unittests/test000010.cpp.new + mv copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + touch -r copasi/sbml/unittests/test000009.cpp copasi/sbml/unittests/test000009.cpp.new + mv copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + touch -r copasi/sbml/unittests/test000008.cpp copasi/sbml/unittests/test000008.cpp.new + mv copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + touch -r copasi/sbml/unittests/test000007.cpp copasi/sbml/unittests/test000007.cpp.new + mv copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + touch -r copasi/sbml/unittests/test000006.cpp copasi/sbml/unittests/test000006.cpp.new + mv copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + touch -r copasi/sbml/unittests/test000005.cpp copasi/sbml/unittests/test000005.cpp.new + mv copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + touch -r copasi/sbml/unittests/test000004.cpp copasi/sbml/unittests/test000004.cpp.new + mv copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + touch -r copasi/sbml/unittests/test000003.cpp copasi/sbml/unittests/test000003.cpp.new + mv copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + touch -r copasi/sbml/unittests/test000002.cpp copasi/sbml/unittests/test000002.cpp.new + mv copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + touch -r copasi/sbml/unittests/test000001.cpp copasi/sbml/unittests/test000001.cpp.new + mv copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + touch -r copasi/sbml/unittests/test.cpp copasi/sbml/unittests/test.cpp.new + mv copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + touch -r copasi/sbml/StdException.cpp copasi/sbml/StdException.cpp.new + mv copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + touch -r copasi/sbml/SBMLUtils.cpp copasi/sbml/SBMLUtils.cpp.new + mv copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + touch -r copasi/sbml/SBMLUnitSupport.cpp copasi/sbml/SBMLUnitSupport.cpp.new + mv copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + touch -r copasi/sbml/SBMLReference.cpp copasi/sbml/SBMLReference.cpp.new + mv copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + touch -r copasi/sbml/SBMLIncompatibility.cpp copasi/sbml/SBMLIncompatibility.cpp.new + mv copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + touch -r copasi/sbml/SBMLImporter.cpp copasi/sbml/SBMLImporter.cpp.new + mv copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + touch -r copasi/sbml/ConverterASTNode.cpp copasi/sbml/ConverterASTNode.cpp.new + mv copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + touch -r copasi/sbml/CSBMLExporter.cpp copasi/sbml/CSBMLExporter.cpp.new + mv copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + touch -r copasi/sbml/CCellDesignerImporter.cpp copasi/sbml/CCellDesignerImporter.cpp.new + mv copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + touch -r copasi/resourcesUI/CQIconResource.cpp copasi/resourcesUI/CQIconResource.cpp.new + mv copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + touch -r copasi/report/CReportDefinitionVector.cpp copasi/report/CReportDefinitionVector.cpp.new + mv copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + touch -r copasi/report/CReportDefinition.cpp copasi/report/CReportDefinition.cpp.new + mv copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + touch -r copasi/report/CReportBody.cpp copasi/report/CReportBody.cpp.new + mv copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReport.cpp.new copasi/report/CReport.cpp + touch -r copasi/report/CReport.cpp copasi/report/CReport.cpp.new + mv copasi/report/CReport.cpp.new copasi/report/CReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + touch -r copasi/report/COutputAssistant.cpp copasi/report/COutputAssistant.cpp.new + mv copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + touch -r copasi/report/CKeyFactory.cpp copasi/report/CKeyFactory.cpp.new + mv copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + touch -r copasi/report/CDataHandler.cpp copasi/report/CDataHandler.cpp.new + mv copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + touch -r copasi/randomGenerator/Cr250.cpp copasi/randomGenerator/Cr250.cpp.new + mv copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + touch -r copasi/randomGenerator/Cmt19937.cpp copasi/randomGenerator/Cmt19937.cpp.new + mv copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + touch -r copasi/randomGenerator/CRandom.cpp copasi/randomGenerator/CRandom.cpp.new + mv copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + touch -r copasi/randomGenerator/CPermutation.cpp copasi/randomGenerator/CPermutation.cpp.new + mv copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + touch -r copasi/qlayout/CQZoomableView.cpp copasi/qlayout/CQZoomableView.cpp.new + mv copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + touch -r copasi/qlayout/CQStyledGraphicsItem.cpp copasi/qlayout/CQStyledGraphicsItem.cpp.new + mv copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + touch -r copasi/qlayout/CQRoundedRect.cpp copasi/qlayout/CQRoundedRect.cpp.new + mv copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + touch -r copasi/qlayout/CQRenderConverter.cpp copasi/qlayout/CQRenderConverter.cpp.new + mv copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + touch -r copasi/qlayout/CQLayoutView.cpp copasi/qlayout/CQLayoutView.cpp.new + mv copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + touch -r copasi/qlayout/CQLayoutScene.cpp copasi/qlayout/CQLayoutScene.cpp.new + mv copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + touch -r copasi/qlayout/CQLabelGraphicsItem.cpp copasi/qlayout/CQLabelGraphicsItem.cpp.new + mv copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + touch -r copasi/qlayout/CQElementProperties.cpp copasi/qlayout/CQElementProperties.cpp.new + mv copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + touch -r copasi/qlayout/CQEffectDescriptionEdit.cpp copasi/qlayout/CQEffectDescriptionEdit.cpp.new + mv copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + touch -r copasi/qlayout/CQEffectDescription.cpp copasi/qlayout/CQEffectDescription.cpp.new + mv copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + touch -r copasi/qlayout/CQCopasiGraphicsItem.cpp copasi/qlayout/CQCopasiGraphicsItem.cpp.new + mv copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + touch -r copasi/qlayout/CQCopasiEffect.cpp copasi/qlayout/CQCopasiEffect.cpp.new + mv copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + touch -r copasi/qlayout/CQCopasiAnimation.cpp copasi/qlayout/CQCopasiAnimation.cpp.new + mv copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + touch -r copasi/qlayout/CQConnectionGraphicsItem.cpp copasi/qlayout/CQConnectionGraphicsItem.cpp.new + mv copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + touch -r copasi/qlayout/CQAnimationWindow.cpp copasi/qlayout/CQAnimationWindow.cpp.new + mv copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + touch -r copasi/qlayout/CQAnimationSettingsEditor.cpp copasi/qlayout/CQAnimationSettingsEditor.cpp.new + mv copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + touch -r copasi/qlayout/CQAnimationControls.cpp copasi/qlayout/CQAnimationControls.cpp.new + mv copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + touch -r copasi/pvmtest/pvmtest.cpp copasi/pvmtest/pvmtest.cpp.new + mv copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + touch -r copasi/plotUI/scrollzoomer.cpp copasi/plotUI/scrollzoomer.cpp.new + mv copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + touch -r copasi/plotUI/scrollbar.cpp copasi/plotUI/scrollbar.cpp.new + mv copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + touch -r copasi/plotUI/plotwindow.cpp copasi/plotUI/plotwindow.cpp.new + mv copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + touch -r copasi/plotUI/curve2dwidget.cpp copasi/plotUI/curve2dwidget.cpp.new + mv copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + touch -r copasi/plotUI/HistoWidget.cpp copasi/plotUI/HistoWidget.cpp.new + mv copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + touch -r copasi/plotUI/CSpectorgramData.cpp copasi/plotUI/CSpectorgramData.cpp.new + mv copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + touch -r copasi/plotUI/CQwtPlot.cpp copasi/plotUI/CQwtPlot.cpp.new + mv copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + touch -r copasi/plotUI/CQtChartsPlot.cpp copasi/plotUI/CQtChartsPlot.cpp.new + mv copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + touch -r copasi/plotUI/CQSpectogramWidget.cpp copasi/plotUI/CQSpectogramWidget.cpp.new + mv copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + touch -r copasi/plotUI/CQPlotSubwidget.cpp copasi/plotUI/CQPlotSubwidget.cpp.new + mv copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + touch -r copasi/plotUI/CQPlotEditWidget.cpp copasi/plotUI/CQPlotEditWidget.cpp.new + mv copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + touch -r copasi/plotUI/CQPlotColors.cpp copasi/plotUI/CQPlotColors.cpp.new + mv copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + touch -r copasi/plotUI/CQMarchingSquares.cpp copasi/plotUI/CQMarchingSquares.cpp.new + mv copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + touch -r copasi/plotUI/CQExtender.cpp copasi/plotUI/CQExtender.cpp.new + mv copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + touch -r copasi/plotUI/CQDataVizPlot.cpp copasi/plotUI/CQDataVizPlot.cpp.new + mv copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + touch -r copasi/plotUI/CQCustomPlot.cpp copasi/plotUI/CQCustomPlot.cpp.new + mv copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + touch -r copasi/plotUI/CQAdvancedPlotSettings.cpp copasi/plotUI/CQAdvancedPlotSettings.cpp.new + mv copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + touch -r copasi/plotUI/CPlotSpectogram.cpp copasi/plotUI/CPlotSpectogram.cpp.new + mv copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + touch -r copasi/plotUI/CPlotInterface.cpp copasi/plotUI/CPlotInterface.cpp.new + mv copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + touch -r copasi/plotUI/COutputHandlerPlot.cpp copasi/plotUI/COutputHandlerPlot.cpp.new + mv copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + touch -r copasi/plotUI/CLinearColorMap.cpp copasi/plotUI/CLinearColorMap.cpp.new + mv copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + touch -r copasi/plotUI/CHistoCurveData.cpp copasi/plotUI/CHistoCurveData.cpp.new + mv copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + touch -r copasi/plotUI/CBandedGraphData.cpp copasi/plotUI/CBandedGraphData.cpp.new + mv copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + touch -r copasi/plotUI/C2DPlotCurve.cpp copasi/plotUI/C2DPlotCurve.cpp.new + mv copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + touch -r copasi/plotUI/C2DCurveData.cpp copasi/plotUI/C2DCurveData.cpp.new + mv copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + touch -r copasi/plotUI/BandedGraphWidget.cpp copasi/plotUI/BandedGraphWidget.cpp.new + mv copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + touch -r copasi/plot/CPlotSpecification.cpp copasi/plot/CPlotSpecification.cpp.new + mv copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + touch -r copasi/plot/CPlotItem.cpp copasi/plot/CPlotItem.cpp.new + mv copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + touch -r copasi/plot/CPlotColors.cpp copasi/plot/CPlotColors.cpp.new + mv copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + touch -r copasi/plot/COutputDefinitionVector.cpp copasi/plot/COutputDefinitionVector.cpp.new + mv copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + touch -r copasi/parameterFitting/CFitTask.cpp copasi/parameterFitting/CFitTask.cpp.new + mv copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + touch -r copasi/parameterFitting/CFitProblem.cpp copasi/parameterFitting/CFitProblem.cpp.new + mv copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + touch -r copasi/parameterFitting/CFitItem.cpp copasi/parameterFitting/CFitItem.cpp.new + mv copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + touch -r copasi/parameterFitting/CExperimentSet.cpp copasi/parameterFitting/CExperimentSet.cpp.new + mv copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + touch -r copasi/parameterFitting/CExperimentObjectMap.cpp copasi/parameterFitting/CExperimentObjectMap.cpp.new + mv copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + touch -r copasi/parameterFitting/CExperimentFileInfo.cpp copasi/parameterFitting/CExperimentFileInfo.cpp.new + mv copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + touch -r copasi/parameterFitting/CExperiment.cpp copasi/parameterFitting/CExperiment.cpp.new + mv copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + touch -r copasi/output/COutputHandler.cpp copasi/output/COutputHandler.cpp.new + mv copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + touch -r copasi/oscillation/COscillationTask.cpp copasi/oscillation/COscillationTask.cpp.new + mv copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + touch -r copasi/oscillation/COscillationProblem.cpp copasi/oscillation/COscillationProblem.cpp.new + mv copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + touch -r copasi/oscillation/COscillationMethodIntegrate.cpp copasi/oscillation/COscillationMethodIntegrate.cpp.new + mv copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + touch -r copasi/oscillation/COscillationMethod.cpp copasi/oscillation/COscillationMethod.cpp.new + mv copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + touch -r copasi/optimization/FminBrent.cpp copasi/optimization/FminBrent.cpp.new + mv copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + touch -r copasi/optimization/CTruncatedNewton.cpp copasi/optimization/CTruncatedNewton.cpp.new + mv copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + touch -r copasi/optimization/CRealProblem.cpp copasi/optimization/CRealProblem.cpp.new + mv copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + touch -r copasi/optimization/CRandomSearch.cpp copasi/optimization/CRandomSearch.cpp.new + mv copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + touch -r copasi/optimization/CPraxis.cpp copasi/optimization/CPraxis.cpp.new + mv copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + touch -r copasi/optimization/COptTask.cpp copasi/optimization/COptTask.cpp.new + mv copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + touch -r copasi/optimization/COptProblem.cpp copasi/optimization/COptProblem.cpp.new + mv copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + touch -r copasi/optimization/COptPopulationMethod.cpp copasi/optimization/COptPopulationMethod.cpp.new + mv copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + touch -r copasi/optimization/COptMethodTruncatedNewton.cpp copasi/optimization/COptMethodTruncatedNewton.cpp.new + mv copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + touch -r copasi/optimization/COptMethodSteepestDescent.cpp copasi/optimization/COptMethodSteepestDescent.cpp.new + mv copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + touch -r copasi/optimization/COptMethodStatistics.cpp copasi/optimization/COptMethodStatistics.cpp.new + mv copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + touch -r copasi/optimization/COptMethodSS.cpp copasi/optimization/COptMethodSS.cpp.new + mv copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + touch -r copasi/optimization/COptMethodSRES.cpp copasi/optimization/COptMethodSRES.cpp.new + mv copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + touch -r copasi/optimization/COptMethodSA.cpp copasi/optimization/COptMethodSA.cpp.new + mv copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + touch -r copasi/optimization/COptMethodPraxis.cpp copasi/optimization/COptMethodPraxis.cpp.new + mv copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + touch -r copasi/optimization/COptMethodPS.cpp copasi/optimization/COptMethodPS.cpp.new + mv copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + touch -r copasi/optimization/COptMethodNelderMead.cpp copasi/optimization/COptMethodNelderMead.cpp.new + mv copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + touch -r copasi/optimization/COptMethodNL2SOL.cpp copasi/optimization/COptMethodNL2SOL.cpp.new + mv copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + touch -r copasi/optimization/COptMethodLevenbergMarquardt.cpp copasi/optimization/COptMethodLevenbergMarquardt.cpp.new + mv copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + touch -r copasi/optimization/COptMethodHookeJeeves.cpp copasi/optimization/COptMethodHookeJeeves.cpp.new + mv copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + touch -r copasi/optimization/COptMethodGASR.cpp copasi/optimization/COptMethodGASR.cpp.new + mv copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + touch -r copasi/optimization/COptMethodGA.cpp copasi/optimization/COptMethodGA.cpp.new + mv copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + touch -r copasi/optimization/COptMethodEP.cpp copasi/optimization/COptMethodEP.cpp.new + mv copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + touch -r copasi/optimization/COptMethodDE.cpp copasi/optimization/COptMethodDE.cpp.new + mv copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + touch -r copasi/optimization/COptMethodCoranaWalk.cpp copasi/optimization/COptMethodCoranaWalk.cpp.new + mv copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + touch -r copasi/optimization/COptMethod.cpp copasi/optimization/COptMethod.cpp.new + mv copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + touch -r copasi/optimization/COptLogItem.cpp copasi/optimization/COptLogItem.cpp.new + mv copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + touch -r copasi/optimization/COptLogEntry.cpp copasi/optimization/COptLogEntry.cpp.new + mv copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + touch -r copasi/optimization/COptLog.cpp copasi/optimization/COptLog.cpp.new + mv copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + touch -r copasi/optimization/COptItem.cpp copasi/optimization/COptItem.cpp.new + mv copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + touch -r copasi/optimization/CNL2SOL.cpp copasi/optimization/CNL2SOL.cpp.new + mv copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + touch -r copasi/odepack++/dstoda.cpp copasi/odepack++/dstoda.cpp.new + mv copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + touch -r copasi/odepack++/dsolsy.cpp copasi/odepack++/dsolsy.cpp.new + mv copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + touch -r copasi/odepack++/drcheck.cpp copasi/odepack++/drcheck.cpp.new + mv copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + touch -r copasi/odepack++/dprja.cpp copasi/odepack++/dprja.cpp.new + mv copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + touch -r copasi/odepack++/dmnorm.cpp copasi/odepack++/dmnorm.cpp.new + mv copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + touch -r copasi/odepack++/dintdy.cpp copasi/odepack++/dintdy.cpp.new + mv copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + touch -r copasi/odepack++/dfnorm.cpp copasi/odepack++/dfnorm.cpp.new + mv copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + touch -r copasi/odepack++/dewset.cpp copasi/odepack++/dewset.cpp.new + mv copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + touch -r copasi/odepack++/decsol.cpp copasi/odepack++/decsol.cpp.new + mv copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + touch -r copasi/odepack++/dcfode.cpp copasi/odepack++/dcfode.cpp.new + mv copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + touch -r copasi/odepack++/dc_decsol.cpp copasi/odepack++/dc_decsol.cpp.new + mv copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + touch -r copasi/odepack++/dbnorm.cpp copasi/odepack++/dbnorm.cpp.new + mv copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + touch -r copasi/odepack++/common.cpp copasi/odepack++/common.cpp.new + mv copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + touch -r copasi/odepack++/Cxerrwd.cpp copasi/odepack++/Cxerrwd.cpp.new + mv copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + touch -r copasi/odepack++/CRadau5.cpp copasi/odepack++/CRadau5.cpp.new + mv copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + touch -r copasi/odepack++/CLSODAR.cpp copasi/odepack++/CLSODAR.cpp.new + mv copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + touch -r copasi/odepack++/CLSODA.cpp copasi/odepack++/CLSODA.cpp.new + mv copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + touch -r copasi/odepack++/CInternalSolver.cpp copasi/odepack++/CInternalSolver.cpp.new + mv copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + touch -r copasi/moieties/CMoietiesTask.cpp copasi/moieties/CMoietiesTask.cpp.new + mv copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + touch -r copasi/moieties/CMoietiesProblem.cpp copasi/moieties/CMoietiesProblem.cpp.new + mv copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + touch -r copasi/moieties/CMoietiesMethod.cpp copasi/moieties/CMoietiesMethod.cpp.new + mv copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CState.cpp.new copasi/model/CState.cpp + touch -r copasi/model/CState.cpp copasi/model/CState.cpp.new + mv copasi/model/CState.cpp.new copasi/model/CState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + touch -r copasi/model/CReactionInterface.cpp copasi/model/CReactionInterface.cpp.new + mv copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + touch -r copasi/model/CReaction.cpp copasi/model/CReaction.cpp.new + mv copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + touch -r copasi/model/CObjectLists.cpp copasi/model/CObjectLists.cpp.new + mv copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + touch -r copasi/model/CMoiety.cpp copasi/model/CMoiety.cpp.new + mv copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + touch -r copasi/model/CModelValue.cpp copasi/model/CModelValue.cpp.new + mv copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + touch -r copasi/model/CModelParameterSet.cpp copasi/model/CModelParameterSet.cpp.new + mv copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + touch -r copasi/model/CModelParameterGroup.cpp copasi/model/CModelParameterGroup.cpp.new + mv copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + touch -r copasi/model/CModelParameter.cpp copasi/model/CModelParameter.cpp.new + mv copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + touch -r copasi/model/CModelMerging.cpp copasi/model/CModelMerging.cpp.new + mv copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + touch -r copasi/model/CModelExpansion.cpp copasi/model/CModelExpansion.cpp.new + mv copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + touch -r copasi/model/CModelAnalyzer.cpp copasi/model/CModelAnalyzer.cpp.new + mv copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModel.cpp.new copasi/model/CModel.cpp + touch -r copasi/model/CModel.cpp copasi/model/CModel.cpp.new + mv copasi/model/CModel.cpp.new copasi/model/CModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + touch -r copasi/model/CMetabNameInterface.cpp copasi/model/CMetabNameInterface.cpp.new + mv copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + touch -r copasi/model/CMetab.cpp copasi/model/CMetab.cpp.new + mv copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + touch -r copasi/model/CMMLOutput.cpp copasi/model/CMMLOutput.cpp.new + mv copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + touch -r copasi/model/CEvent.cpp copasi/model/CEvent.cpp.new + mv copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + touch -r copasi/model/CCompartment.cpp copasi/model/CCompartment.cpp.new + mv copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + touch -r copasi/model/CChemEqParser_yacc.cpp copasi/model/CChemEqParser_yacc.cpp.new + mv copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + touch -r copasi/model/CChemEqParser_lex.cpp copasi/model/CChemEqParser_lex.cpp.new + mv copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + touch -r copasi/model/CChemEqParser.cpp copasi/model/CChemEqParser.cpp.new + mv copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + touch -r copasi/model/CChemEqInterface.cpp copasi/model/CChemEqInterface.cpp.new + mv copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + touch -r copasi/model/CChemEqElement.cpp copasi/model/CChemEqElement.cpp.new + mv copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + touch -r copasi/model/CChemEq.cpp copasi/model/CChemEq.cpp.new + mv copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + touch -r copasi/model/CAnnotation.cpp copasi/model/CAnnotation.cpp.new + mv copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + touch -r copasi/miase/CMiaseTask.cpp copasi/miase/CMiaseTask.cpp.new + mv copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + touch -r copasi/miase/CMiaseSimulation.cpp copasi/miase/CMiaseSimulation.cpp.new + mv copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + touch -r copasi/miase/CMiaseParser.cpp copasi/miase/CMiaseParser.cpp.new + mv copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + touch -r copasi/miase/CMiaseOutput.cpp copasi/miase/CMiaseOutput.cpp.new + mv copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + touch -r copasi/miase/CMiaseModel.cpp copasi/miase/CMiaseModel.cpp.new + mv copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + touch -r copasi/miase/CMiaseML.cpp copasi/miase/CMiaseML.cpp.new + mv copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + touch -r copasi/miase/CMiaseBase.cpp copasi/miase/CMiaseBase.cpp.new + mv copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + touch -r copasi/math/CMathUpdateSequence.cpp copasi/math/CMathUpdateSequence.cpp.new + mv copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + touch -r copasi/math/CMathReaction.cpp copasi/math/CMathReaction.cpp.new + mv copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + touch -r copasi/math/CMathObject.cpp copasi/math/CMathObject.cpp.new + mv copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + touch -r copasi/math/CMathHistory.cpp copasi/math/CMathHistory.cpp.new + mv copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + touch -r copasi/math/CMathExpression.cpp copasi/math/CMathExpression.cpp.new + mv copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + touch -r copasi/math/CMathEventQueue.cpp copasi/math/CMathEventQueue.cpp.new + mv copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + touch -r copasi/math/CMathEvent.cpp copasi/math/CMathEvent.cpp.new + mv copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + touch -r copasi/math/CMathEnum.cpp copasi/math/CMathEnum.cpp.new + mv copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + touch -r copasi/math/CMathDerive.cpp copasi/math/CMathDerive.cpp.new + mv copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + touch -r copasi/math/CMathDependencyNodeIterator.cpp copasi/math/CMathDependencyNodeIterator.cpp.new + mv copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + touch -r copasi/math/CMathDependencyNode.cpp copasi/math/CMathDependencyNode.cpp.new + mv copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + touch -r copasi/math/CMathDependencyGraph.cpp copasi/math/CMathDependencyGraph.cpp.new + mv copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + touch -r copasi/math/CMathDelay.cpp copasi/math/CMathDelay.cpp.new + mv copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + touch -r copasi/math/CMathContainer.cpp copasi/math/CMathContainer.cpp.new + mv copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + touch -r copasi/math/CJitExpression.cpp copasi/math/CJitExpression.cpp.new + mv copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + touch -r copasi/math/CJitCompilerImplementation.cpp copasi/math/CJitCompilerImplementation.cpp.new + mv copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + touch -r copasi/math/CJitCompiler.cpp copasi/math/CJitCompiler.cpp.new + mv copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + touch -r copasi/lyap/CLyapWolfMethod.cpp copasi/lyap/CLyapWolfMethod.cpp.new + mv copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + touch -r copasi/lyap/CLyapTask.cpp copasi/lyap/CLyapTask.cpp.new + mv copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + touch -r copasi/lyap/CLyapProblem.cpp copasi/lyap/CLyapProblem.cpp.new + mv copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + touch -r copasi/lyap/CLyapMethod.cpp copasi/lyap/CLyapMethod.cpp.new + mv copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + touch -r copasi/lna/CLNATask.cpp copasi/lna/CLNATask.cpp.new + mv copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + touch -r copasi/lna/CLNAProblem.cpp copasi/lna/CLNAProblem.cpp.new + mv copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + touch -r copasi/lna/CLNAMethod.cpp copasi/lna/CLNAMethod.cpp.new + mv copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + touch -r copasi/layoutUI/RGTextureSpec.cpp copasi/layoutUI/RGTextureSpec.cpp.new + mv copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + touch -r copasi/layoutUI/ParaPanel.cpp copasi/layoutUI/ParaPanel.cpp.new + mv copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + touch -r copasi/layoutUI/NodeSizePanel.cpp copasi/layoutUI/NodeSizePanel.cpp.new + mv copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + touch -r copasi/layoutUI/FontChooser.cpp copasi/layoutUI/FontChooser.cpp.new + mv copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + touch -r copasi/layoutUI/CVisParameters.cpp copasi/layoutUI/CVisParameters.cpp.new + mv copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + touch -r copasi/layoutUI/CSimSummaryInfo.cpp copasi/layoutUI/CSimSummaryInfo.cpp.new + mv copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + touch -r copasi/layoutUI/CQSpringLayoutParameterWindow.cpp copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new + mv copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + touch -r copasi/layoutUI/CQScreenshotOptionsDialog.cpp copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new + mv copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + touch -r copasi/layoutUI/CQQtImageTexturizer.cpp copasi/layoutUI/CQQtImageTexturizer.cpp.new + mv copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + touch -r copasi/layoutUI/CQPlayerControlWidget.cpp copasi/layoutUI/CQPlayerControlWidget.cpp.new + mv copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + touch -r copasi/layoutUI/CQNewMainWindow.cpp copasi/layoutUI/CQNewMainWindow.cpp.new + mv copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + touch -r copasi/layoutUI/CQLayoutThread.cpp copasi/layoutUI/CQLayoutThread.cpp.new + mv copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + touch -r copasi/layoutUI/CQLayoutMainWindow.cpp copasi/layoutUI/CQLayoutMainWindow.cpp.new + mv copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + touch -r copasi/layoutUI/CQGLViewport.cpp copasi/layoutUI/CQGLViewport.cpp.new + mv copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + touch -r copasi/layoutUI/CQGLNetworkPainter.cpp copasi/layoutUI/CQGLNetworkPainter.cpp.new + mv copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + touch -r copasi/layoutUI/CQGLLayoutViewer.cpp copasi/layoutUI/CQGLLayoutViewer.cpp.new + mv copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + touch -r copasi/layoutUI/CQGLLayoutPainter.cpp copasi/layoutUI/CQGLLayoutPainter.cpp.new + mv copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + touch -r copasi/layoutUI/CQFontRenderer.cpp copasi/layoutUI/CQFontRenderer.cpp.new + mv copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + touch -r copasi/layoutUI/CQCurrentValueTable.cpp copasi/layoutUI/CQCurrentValueTable.cpp.new + mv copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + touch -r copasi/layoutUI/CQAutolayoutWizard.cpp copasi/layoutUI/CQAutolayoutWizard.cpp.new + mv copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + touch -r copasi/layoutUI/CLabel.cpp copasi/layoutUI/CLabel.cpp.new + mv copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + touch -r copasi/layoutUI/CGraphNode.cpp copasi/layoutUI/CGraphNode.cpp.new + mv copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + touch -r copasi/layoutUI/CGraphCurve.cpp copasi/layoutUI/CGraphCurve.cpp.new + mv copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + touch -r copasi/layoutUI/CDataEntity.cpp copasi/layoutUI/CDataEntity.cpp.new + mv copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + touch -r copasi/layoutUI/CCompartmentGraphNode.cpp copasi/layoutUI/CCompartmentGraphNode.cpp.new + mv copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + touch -r copasi/layoutUI/CArrow.cpp copasi/layoutUI/CArrow.cpp.new + mv copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + touch -r copasi/layoutUI/BezierCurve.cpp copasi/layoutUI/BezierCurve.cpp.new + mv copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + touch -r copasi/layout/utility_classes.cpp copasi/layout/utility_classes.cpp.new + mv copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + touch -r copasi/layout/SBMLDocumentLoader.cpp copasi/layout/SBMLDocumentLoader.cpp.new + mv copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + touch -r copasi/layout/CListOfLayouts.cpp copasi/layout/CListOfLayouts.cpp.new + mv copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + touch -r copasi/layout/CLayoutState.cpp copasi/layout/CLayoutState.cpp.new + mv copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + touch -r copasi/layout/CLayoutInitializer.cpp copasi/layout/CLayoutInitializer.cpp.new + mv copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + touch -r copasi/layout/CLayoutEngine.cpp copasi/layout/CLayoutEngine.cpp.new + mv copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + touch -r copasi/layout/CLayout.cpp copasi/layout/CLayout.cpp.new + mv copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + touch -r copasi/layout/CLUnresolvedReferenceException.cpp copasi/layout/CLUnresolvedReferenceException.cpp.new + mv copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + touch -r copasi/layout/CLTransformation2D.cpp copasi/layout/CLTransformation2D.cpp.new + mv copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + touch -r copasi/layout/CLTransformation.cpp copasi/layout/CLTransformation.cpp.new + mv copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + touch -r copasi/layout/CLText.cpp copasi/layout/CLText.cpp.new + mv copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + touch -r copasi/layout/CLStyle.cpp copasi/layout/CLStyle.cpp.new + mv copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + touch -r copasi/layout/CLSimpleImageTexturizer.cpp copasi/layout/CLSimpleImageTexturizer.cpp.new + mv copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + touch -r copasi/layout/CLRenderResolver.cpp copasi/layout/CLRenderResolver.cpp.new + mv copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + touch -r copasi/layout/CLRenderPoint.cpp copasi/layout/CLRenderPoint.cpp.new + mv copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + touch -r copasi/layout/CLRenderInformationBase.cpp copasi/layout/CLRenderInformationBase.cpp.new + mv copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + touch -r copasi/layout/CLRenderFlattener.cpp copasi/layout/CLRenderFlattener.cpp.new + mv copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + touch -r copasi/layout/CLRenderCurve.cpp copasi/layout/CLRenderCurve.cpp.new + mv copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + touch -r copasi/layout/CLRenderCubicBezier.cpp copasi/layout/CLRenderCubicBezier.cpp.new + mv copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + touch -r copasi/layout/CLRelAbsVector.cpp copasi/layout/CLRelAbsVector.cpp.new + mv copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + touch -r copasi/layout/CLRectangle.cpp copasi/layout/CLRectangle.cpp.new + mv copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + touch -r copasi/layout/CLReactionGlyph.cpp copasi/layout/CLReactionGlyph.cpp.new + mv copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + touch -r copasi/layout/CLRadialGradient.cpp copasi/layout/CLRadialGradient.cpp.new + mv copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + touch -r copasi/layout/CLPolygon.cpp copasi/layout/CLPolygon.cpp.new + mv copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + touch -r copasi/layout/CLLocalStyle.cpp copasi/layout/CLLocalStyle.cpp.new + mv copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + touch -r copasi/layout/CLLocalRenderInformation.cpp copasi/layout/CLLocalRenderInformation.cpp.new + mv copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + touch -r copasi/layout/CLLinearGradient.cpp copasi/layout/CLLinearGradient.cpp.new + mv copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + touch -r copasi/layout/CLLineEnding.cpp copasi/layout/CLLineEnding.cpp.new + mv copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + touch -r copasi/layout/CLLayoutRenderer.cpp copasi/layout/CLLayoutRenderer.cpp.new + mv copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + touch -r copasi/layout/CLImageTexturizer.cpp copasi/layout/CLImageTexturizer.cpp.new + mv copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + touch -r copasi/layout/CLImage.cpp copasi/layout/CLImage.cpp.new + mv copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + touch -r copasi/layout/CLGroup.cpp copasi/layout/CLGroup.cpp.new + mv copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + touch -r copasi/layout/CLGraphicalPrimitive2D.cpp copasi/layout/CLGraphicalPrimitive2D.cpp.new + mv copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + touch -r copasi/layout/CLGraphicalPrimitive1D.cpp copasi/layout/CLGraphicalPrimitive1D.cpp.new + mv copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + touch -r copasi/layout/CLGraphicalObject.cpp copasi/layout/CLGraphicalObject.cpp.new + mv copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + touch -r copasi/layout/CLGradientStops.cpp copasi/layout/CLGradientStops.cpp.new + mv copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + touch -r copasi/layout/CLGradientStop.cpp copasi/layout/CLGradientStop.cpp.new + mv copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + touch -r copasi/layout/CLGradientBase.cpp copasi/layout/CLGradientBase.cpp.new + mv copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + touch -r copasi/layout/CLGlyphs.cpp copasi/layout/CLGlyphs.cpp.new + mv copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + touch -r copasi/layout/CLGlobalStyle.cpp copasi/layout/CLGlobalStyle.cpp.new + mv copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + touch -r copasi/layout/CLGlobalRenderInformation.cpp copasi/layout/CLGlobalRenderInformation.cpp.new + mv copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + touch -r copasi/layout/CLEllipse.cpp copasi/layout/CLEllipse.cpp.new + mv copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + touch -r copasi/layout/CLDefaultStyles.cpp copasi/layout/CLDefaultStyles.cpp.new + mv copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + touch -r copasi/layout/CLCurve.cpp copasi/layout/CLCurve.cpp.new + mv copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + touch -r copasi/layout/CLColorDefinition.cpp copasi/layout/CLColorDefinition.cpp.new + mv copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + touch -r copasi/layout/CLBase.cpp copasi/layout/CLBase.cpp.new + mv copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + touch -r copasi/layout/CCopasiSpringLayout.cpp copasi/layout/CCopasiSpringLayout.cpp.new + mv copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + touch -r copasi/layout/CAbstractLayoutInterface.cpp copasi/layout/CAbstractLayoutInterface.cpp.new + mv copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + touch -r copasi/function/CNodeK.cpp copasi/function/CNodeK.cpp.new + mv copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + touch -r copasi/function/CMassAction.cpp copasi/function/CMassAction.cpp.new + mv copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + touch -r copasi/function/CKinFunction.cpp copasi/function/CKinFunction.cpp.new + mv copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + touch -r copasi/function/CFunctionParameters.cpp copasi/function/CFunctionParameters.cpp.new + mv copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + touch -r copasi/function/CFunctionParameter.cpp copasi/function/CFunctionParameter.cpp.new + mv copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + touch -r copasi/function/CFunctionDB.cpp copasi/function/CFunctionDB.cpp.new + mv copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + touch -r copasi/function/CFunctionAnalyzer.cpp copasi/function/CFunctionAnalyzer.cpp.new + mv copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + touch -r copasi/function/CFunction.cpp copasi/function/CFunction.cpp.new + mv copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + touch -r copasi/function/CExpression.cpp copasi/function/CExpression.cpp.new + mv copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + touch -r copasi/function/CEvaluationTree.cpp copasi/function/CEvaluationTree.cpp.new + mv copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + touch -r copasi/function/CEvaluationParser_yacc.cpp copasi/function/CEvaluationParser_yacc.cpp.new + mv copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + touch -r copasi/function/CEvaluationNodeWhiteSpace.cpp copasi/function/CEvaluationNodeWhiteSpace.cpp.new + mv copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + touch -r copasi/function/CEvaluationNodeVector.cpp copasi/function/CEvaluationNodeVector.cpp.new + mv copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + touch -r copasi/function/CEvaluationNodeVariable.cpp copasi/function/CEvaluationNodeVariable.cpp.new + mv copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + touch -r copasi/function/CEvaluationNodeUnit.cpp copasi/function/CEvaluationNodeUnit.cpp.new + mv copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + touch -r copasi/function/CEvaluationNodeStructure.cpp copasi/function/CEvaluationNodeStructure.cpp.new + mv copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + touch -r copasi/function/CEvaluationNodeOperator.cpp copasi/function/CEvaluationNodeOperator.cpp.new + mv copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + touch -r copasi/function/CEvaluationNodeObject.cpp copasi/function/CEvaluationNodeObject.cpp.new + mv copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + touch -r copasi/function/CEvaluationNodeNumber.cpp copasi/function/CEvaluationNodeNumber.cpp.new + mv copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + touch -r copasi/function/CEvaluationNodeLogical.cpp copasi/function/CEvaluationNodeLogical.cpp.new + mv copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + touch -r copasi/function/CEvaluationNodeFunction.cpp copasi/function/CEvaluationNodeFunction.cpp.new + mv copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + touch -r copasi/function/CEvaluationNodeDelay.cpp copasi/function/CEvaluationNodeDelay.cpp.new + mv copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + touch -r copasi/function/CEvaluationNodeConstant.cpp copasi/function/CEvaluationNodeConstant.cpp.new + mv copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + touch -r copasi/function/CEvaluationNodeChoice.cpp copasi/function/CEvaluationNodeChoice.cpp.new + mv copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + touch -r copasi/function/CEvaluationNodeCall.cpp copasi/function/CEvaluationNodeCall.cpp.new + mv copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + touch -r copasi/function/CEvaluationNode.cpp copasi/function/CEvaluationNode.cpp.new + mv copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + touch -r copasi/function/CEvaluationLexer_lex.cpp copasi/function/CEvaluationLexer_lex.cpp.new + mv copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + touch -r copasi/function/CDerive.cpp copasi/function/CDerive.cpp.new + mv copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + touch -r copasi/function/CCallParameters.cpp copasi/function/CCallParameters.cpp.new + mv copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + touch -r copasi/elementaryFluxModes/CZeroSet.cpp copasi/elementaryFluxModes/CZeroSet.cpp.new + mv copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + touch -r copasi/elementaryFluxModes/CTableauMatrix.cpp copasi/elementaryFluxModes/CTableauMatrix.cpp.new + mv copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + touch -r copasi/elementaryFluxModes/CTableauLine.cpp copasi/elementaryFluxModes/CTableauLine.cpp.new + mv copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + touch -r copasi/elementaryFluxModes/CStepMatrixColumn.cpp copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new + mv copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + touch -r copasi/elementaryFluxModes/CStepMatrix.cpp copasi/elementaryFluxModes/CStepMatrix.cpp.new + mv copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + touch -r copasi/elementaryFluxModes/CSSAMethod.cpp copasi/elementaryFluxModes/CSSAMethod.cpp.new + mv copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + touch -r copasi/elementaryFluxModes/CFluxScore.cpp copasi/elementaryFluxModes/CFluxScore.cpp.new + mv copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + touch -r copasi/elementaryFluxModes/CFluxMode.cpp copasi/elementaryFluxModes/CFluxMode.cpp.new + mv copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + touch -r copasi/elementaryFluxModes/CEFMTask.cpp copasi/elementaryFluxModes/CEFMTask.cpp.new + mv copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + touch -r copasi/elementaryFluxModes/CEFMProblem.cpp copasi/elementaryFluxModes/CEFMProblem.cpp.new + mv copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + touch -r copasi/elementaryFluxModes/CEFMMethod.cpp copasi/elementaryFluxModes/CEFMMethod.cpp.new + mv copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + touch -r copasi/elementaryFluxModes/CEFMAlgorithm.cpp copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new + mv copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeNode.cpp copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTree.cpp copasi/elementaryFluxModes/CBitPatternTree.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternMethod.cpp copasi/elementaryFluxModes/CBitPatternMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + touch -r copasi/crosssection/CCrossSectionTask.cpp copasi/crosssection/CCrossSectionTask.cpp.new + mv copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + touch -r copasi/crosssection/CCrossSectionProblem.cpp copasi/crosssection/CCrossSectionProblem.cpp.new + mv copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + touch -r copasi/crosssection/CCrossSectionMethod.cpp copasi/crosssection/CCrossSectionMethod.cpp.new + mv copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + touch -r copasi/core/CRootContainer.cpp copasi/core/CRootContainer.cpp.new + mv copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + touch -r copasi/core/CRegisteredCommonName.cpp copasi/core/CRegisteredCommonName.cpp.new + mv copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + touch -r copasi/core/CObjectInterface.cpp copasi/core/CObjectInterface.cpp.new + mv copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + touch -r copasi/core/CDataTimer.cpp copasi/core/CDataTimer.cpp.new + mv copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + touch -r copasi/core/CDataString.cpp copasi/core/CDataString.cpp.new + mv copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + touch -r copasi/core/CDataObjectMap.cpp copasi/core/CDataObjectMap.cpp.new + mv copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + touch -r copasi/core/CDataObject.cpp copasi/core/CDataObject.cpp.new + mv copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + touch -r copasi/core/CDataContainer.cpp copasi/core/CDataContainer.cpp.new + mv copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + touch -r copasi/core/CDataArray.cpp copasi/core/CDataArray.cpp.new + mv copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCore.cpp.new copasi/core/CCore.cpp + touch -r copasi/core/CCore.cpp copasi/core/CCore.cpp.new + mv copasi/core/CCore.cpp.new copasi/core/CCore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + touch -r copasi/core/CCommonName.cpp copasi/core/CCommonName.cpp.new + mv copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + touch -r copasi/core/CArrayElementReference.cpp copasi/core/CArrayElementReference.cpp.new + mv copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArray.cpp.new copasi/core/CArray.cpp + touch -r copasi/core/CArray.cpp copasi/core/CArray.cpp.new + mv copasi/core/CArray.cpp.new copasi/core/CArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + touch -r copasi/compareExpressions/unittests/test_simplify.cpp copasi/compareExpressions/unittests/test_simplify.cpp.new + mv copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + touch -r copasi/compareExpressions/unittests/test_normalform.cpp copasi/compareExpressions/unittests/test_normalform.cpp.new + mv copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + touch -r copasi/compareExpressions/unittests/test_node_conversion.cpp copasi/compareExpressions/unittests/test_node_conversion.cpp.new + mv copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + touch -r copasi/compareExpressions/unittests/test_expression_comparison.cpp copasi/compareExpressions/unittests/test_expression_comparison.cpp.new + mv copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + touch -r copasi/compareExpressions/unittests/test_depth_first_iterator.cpp copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new + mv copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + touch -r copasi/compareExpressions/unittests/test_compare_utilities.cpp copasi/compareExpressions/unittests/test_compare_utilities.cpp.new + mv copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + touch -r copasi/compareExpressions/unittests/test_cnormallogical.cpp copasi/compareExpressions/unittests/test_cnormallogical.cpp.new + mv copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + touch -r copasi/compareExpressions/unittests/test_biomodels217_expression.cpp copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new + mv copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + touch -r copasi/compareExpressions/unittests/test.cpp copasi/compareExpressions/unittests/test.cpp.new + mv copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + touch -r copasi/compareExpressions/stresstest/stress_test.cpp copasi/compareExpressions/stresstest/stress_test.cpp.new + mv copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + touch -r copasi/compareExpressions/compare_utilities.cpp copasi/compareExpressions/compare_utilities.cpp.new + mv copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + touch -r copasi/compareExpressions/ConvertToCEvaluationNode.cpp copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new + mv copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + touch -r copasi/compareExpressions/CNormalTranslation.cpp copasi/compareExpressions/CNormalTranslation.cpp.new + mv copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + touch -r copasi/compareExpressions/CNormalSum.cpp copasi/compareExpressions/CNormalSum.cpp.new + mv copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + touch -r copasi/compareExpressions/CNormalProduct.cpp copasi/compareExpressions/CNormalProduct.cpp.new + mv copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + touch -r copasi/compareExpressions/CNormalLogicalItem.cpp copasi/compareExpressions/CNormalLogicalItem.cpp.new + mv copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + touch -r copasi/compareExpressions/CNormalLogical.cpp copasi/compareExpressions/CNormalLogical.cpp.new + mv copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + touch -r copasi/compareExpressions/CNormalLcm.cpp copasi/compareExpressions/CNormalLcm.cpp.new + mv copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + touch -r copasi/compareExpressions/CNormalItemPower.cpp copasi/compareExpressions/CNormalItemPower.cpp.new + mv copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + touch -r copasi/compareExpressions/CNormalItem.cpp copasi/compareExpressions/CNormalItem.cpp.new + mv copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + touch -r copasi/compareExpressions/CNormalGeneralPower.cpp copasi/compareExpressions/CNormalGeneralPower.cpp.new + mv copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + touch -r copasi/compareExpressions/CNormalFunction.cpp copasi/compareExpressions/CNormalFunction.cpp.new + mv copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + touch -r copasi/compareExpressions/CNormalFraction.cpp copasi/compareExpressions/CNormalFraction.cpp.new + mv copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + touch -r copasi/compareExpressions/CNormalChoiceLogical.cpp copasi/compareExpressions/CNormalChoiceLogical.cpp.new + mv copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + touch -r copasi/compareExpressions/CNormalChoice.cpp copasi/compareExpressions/CNormalChoice.cpp.new + mv copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + touch -r copasi/compareExpressions/CNormalCall.cpp copasi/compareExpressions/CNormalCall.cpp.new + mv copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + touch -r copasi/compareExpressions/CNormalBase.cpp copasi/compareExpressions/CNormalBase.cpp.new + mv copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + touch -r copasi/compareExpressions/CEvaluationNodeNormalizer.cpp copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new + mv copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + touch -r copasi/commandline/COptions.cpp copasi/commandline/COptions.cpp.new + mv copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + touch -r copasi/commandline/COptionParser.cpp copasi/commandline/COptionParser.cpp.new + mv copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + touch -r copasi/commandline/CLocaleString.cpp copasi/commandline/CLocaleString.cpp.new + mv copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + touch -r copasi/commandline/CConfigurationFile.cpp copasi/commandline/CConfigurationFile.cpp.new + mv copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + touch -r copasi/bindings/python/local.cpp copasi/bindings/python/local.cpp.new + mv copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + touch -r copasi/bindings/perl/local.cpp copasi/bindings/perl/local.cpp.new + mv copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + touch -r copasi/bindings/octave/local.cpp copasi/bindings/octave/local.cpp.new + mv copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + touch -r copasi/bindings/java/local.cpp copasi/bindings/java/local.cpp.new + mv copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + touch -r copasi/bindings/csharp/local.cpp copasi/bindings/csharp/local.cpp.new + mv copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + touch -r copasi/bindings/cpp_examples/runSedML/runSedML.cpp copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new + mv copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + touch -r copasi/bindings/cpp_examples/runScan/runScan.cpp copasi/bindings/cpp_examples/runScan/runScan.cpp.new + mv copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + touch -r copasi/bindings/cpp_examples/renderLayout/main.cpp copasi/bindings/cpp_examples/renderLayout/main.cpp.new + mv copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + touch -r copasi/bindings/cpp_examples/renameActiveReport/main.cpp copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new + mv copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + touch -r copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new + mv copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + touch -r copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new + mv copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + touch -r copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new + mv copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + touch -r copasi/bindings/cpp_examples/example9/example9.cpp copasi/bindings/cpp_examples/example9/example9.cpp.new + mv copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + touch -r copasi/bindings/cpp_examples/example8/example8.cpp copasi/bindings/cpp_examples/example8/example8.cpp.new + mv copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + touch -r copasi/bindings/cpp_examples/example7/example7.cpp copasi/bindings/cpp_examples/example7/example7.cpp.new + mv copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + touch -r copasi/bindings/cpp_examples/example6/example6.cpp copasi/bindings/cpp_examples/example6/example6.cpp.new + mv copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + touch -r copasi/bindings/cpp_examples/example5/example5.cpp copasi/bindings/cpp_examples/example5/example5.cpp.new + mv copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + touch -r copasi/bindings/cpp_examples/example4/example4.cpp copasi/bindings/cpp_examples/example4/example4.cpp.new + mv copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + touch -r copasi/bindings/cpp_examples/example3/example3.cpp copasi/bindings/cpp_examples/example3/example3.cpp.new + mv copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + touch -r copasi/bindings/cpp_examples/example2/example2.cpp copasi/bindings/cpp_examples/example2/example2.cpp.new + mv copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + touch -r copasi/bindings/cpp_examples/example10/example10.cpp copasi/bindings/cpp_examples/example10/example10.cpp.new + mv copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + touch -r copasi/bindings/cpp_examples/example1/example1.cpp copasi/bindings/cpp_examples/example1/example1.cpp.new + mv copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + touch -r copasi/bindings/cpp_examples/changeValues/changeValues.cpp copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new + mv copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + touch -r copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new + mv copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + touch -r copasi/bindings/cpp_examples/assignParameterSet/main.cpp copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new + mv copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + touch -r copasi/bindings/common/local_common.cpp copasi/bindings/common/local_common.cpp.new + mv copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + touch -r copasi/bindings/common/downcast_common.cpp copasi/bindings/common/downcast_common.cpp.new + mv copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + touch -r copasi/bindings/R/local.cpp copasi/bindings/R/local.cpp.new + mv copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + touch -r copasi/bindings/R/RProcessCallback.cpp copasi/bindings/R/RProcessCallback.cpp.new + mv copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + touch -r copasi/barChart/qwt3dScale.cpp copasi/barChart/qwt3dScale.cpp.new + mv copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + touch -r copasi/barChart/qwt3dPlot.cpp copasi/barChart/qwt3dPlot.cpp.new + mv copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + touch -r copasi/barChart/qwt3dColor.cpp copasi/barChart/qwt3dColor.cpp.new + mv copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + touch -r copasi/barChart/qwt3dBars.cpp copasi/barChart/qwt3dBars.cpp.new + mv copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + touch -r copasi/barChart/CQBaseWidget.cpp copasi/barChart/CQBaseWidget.cpp.new + mv copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + touch -r copasi/barChart/CQ3DBarsModifier.cpp copasi/barChart/CQ3DBarsModifier.cpp.new + mv copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + touch -r copasi/analytics/CStatistics.cpp copasi/analytics/CStatistics.cpp.new + mv copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + touch -r copasi/analytics/CAnalyticsTask.cpp copasi/analytics/CAnalyticsTask.cpp.new + mv copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + touch -r copasi/analytics/CAnalyticsProblem.cpp copasi/analytics/CAnalyticsProblem.cpp.new + mv copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + touch -r copasi/analytics/CAnalyticsMethod.cpp copasi/analytics/CAnalyticsMethod.cpp.new + mv copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + touch -r copasi/ViewCurrentUI/worker.cpp copasi/ViewCurrentUI/worker.cpp.new + mv copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + touch -r copasi/ViewCurrentUI/main.cpp copasi/ViewCurrentUI/main.cpp.new + mv copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + touch -r copasi/ViewCurrentUI/arguments.cpp copasi/ViewCurrentUI/arguments.cpp.new + mv copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + touch -r copasi/UI/qtUtilities.cpp copasi/UI/qtUtilities.cpp.new + mv copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + touch -r copasi/UI/parametertable.cpp copasi/UI/parametertable.cpp.new + mv copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + touch -r copasi/UI/objectdebug.cpp copasi/UI/objectdebug.cpp.new + mv copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + touch -r copasi/UI/listviews.cpp copasi/UI/listviews.cpp.new + mv copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + touch -r copasi/UI/copasiui3window.cpp copasi/UI/copasiui3window.cpp.new + mv copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + touch -r copasi/UI/copasiWidget.cpp copasi/UI/copasiWidget.cpp.new + mv copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + touch -r copasi/UI/TaskWidget.cpp copasi/UI/TaskWidget.cpp.new + mv copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + touch -r copasi/UI/SteadyStateWidget.cpp copasi/UI/SteadyStateWidget.cpp.new + mv copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + touch -r copasi/UI/StateSubwidget.cpp copasi/UI/StateSubwidget.cpp.new + mv copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + touch -r copasi/UI/SliderSettingsDialog.cpp copasi/UI/SliderSettingsDialog.cpp.new + mv copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + touch -r copasi/UI/SliderDialog.cpp copasi/UI/SliderDialog.cpp.new + mv copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + touch -r copasi/UI/SensitivitiesWidget.cpp copasi/UI/SensitivitiesWidget.cpp.new + mv copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + touch -r copasi/UI/SensWidgetComboBox.cpp copasi/UI/SensWidgetComboBox.cpp.new + mv copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + touch -r copasi/UI/ScanWidget.cpp copasi/UI/ScanWidget.cpp.new + mv copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + touch -r copasi/UI/ReactionsWidget1.cpp copasi/UI/ReactionsWidget1.cpp.new + mv copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + touch -r copasi/UI/ObjectBrowserWidget.cpp copasi/UI/ObjectBrowserWidget.cpp.new + mv copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + touch -r copasi/UI/ObjectBrowserItem.cpp copasi/UI/ObjectBrowserItem.cpp.new + mv copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + touch -r copasi/UI/ObjectBrowserDialog.cpp copasi/UI/ObjectBrowserDialog.cpp.new + mv copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + touch -r copasi/UI/MyLineEdit.cpp copasi/UI/MyLineEdit.cpp.new + mv copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + touch -r copasi/UI/FunctionWidget1.cpp copasi/UI/FunctionWidget1.cpp.new + mv copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + touch -r copasi/UI/DefaultplotDialog.cpp copasi/UI/DefaultplotDialog.cpp.new + mv copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + touch -r copasi/UI/DataModelGUI.cpp copasi/UI/DataModelGUI.cpp.new + mv copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + touch -r copasi/UI/CopasiSlider.cpp copasi/UI/CopasiSlider.cpp.new + mv copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + touch -r copasi/UI/CopasiFileDialog.cpp copasi/UI/CopasiFileDialog.cpp.new + mv copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + touch -r copasi/UI/CWindowInterface.cpp copasi/UI/CWindowInterface.cpp.new + mv copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + touch -r copasi/UI/CUpDownSubwidget.cpp copasi/UI/CUpDownSubwidget.cpp.new + mv copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + touch -r copasi/UI/CScanWidgetTask.cpp copasi/UI/CScanWidgetTask.cpp.new + mv copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + touch -r copasi/UI/CScanWidgetScan.cpp copasi/UI/CScanWidgetScan.cpp.new + mv copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + touch -r copasi/UI/CScanWidgetRepeat.cpp copasi/UI/CScanWidgetRepeat.cpp.new + mv copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + touch -r copasi/UI/CScanWidgetRandom.cpp copasi/UI/CScanWidgetRandom.cpp.new + mv copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + touch -r copasi/UI/CScanItemData.cpp copasi/UI/CScanItemData.cpp.new + mv copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + touch -r copasi/UI/CScanContainerWidget.cpp copasi/UI/CScanContainerWidget.cpp.new + mv copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + touch -r copasi/UI/CQValidatorUnit.cpp copasi/UI/CQValidatorUnit.cpp.new + mv copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + touch -r copasi/UI/CQValidator.cpp copasi/UI/CQValidator.cpp.new + mv copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + touch -r copasi/UI/CQUpdatesWidget.cpp copasi/UI/CQUpdatesWidget.cpp.new + mv copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + touch -r copasi/UI/CQUpdateAvogadro.cpp copasi/UI/CQUpdateAvogadro.cpp.new + mv copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + touch -r copasi/UI/CQUnitsWidget.cpp copasi/UI/CQUnitsWidget.cpp.new + mv copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + touch -r copasi/UI/CQUnitDetail.cpp copasi/UI/CQUnitDetail.cpp.new + mv copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + touch -r copasi/UI/CQUnitDM.cpp copasi/UI/CQUnitDM.cpp.new + mv copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + touch -r copasi/UI/CQUndoTester.cpp copasi/UI/CQUndoTester.cpp.new + mv copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + touch -r copasi/UI/CQTrajectoryWidget.cpp copasi/UI/CQTrajectoryWidget.cpp.new + mv copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + touch -r copasi/UI/CQTimeSeriesWidget.cpp copasi/UI/CQTimeSeriesWidget.cpp.new + mv copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + touch -r copasi/UI/CQTimeSeriesDM.cpp copasi/UI/CQTimeSeriesDM.cpp.new + mv copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + touch -r copasi/UI/CQTimeSensWidget.cpp copasi/UI/CQTimeSensWidget.cpp.new + mv copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + touch -r copasi/UI/CQThread.cpp copasi/UI/CQThread.cpp.new + mv copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + touch -r copasi/UI/CQTextDialog.cpp copasi/UI/CQTextDialog.cpp.new + mv copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + touch -r copasi/UI/CQTaskThread.cpp copasi/UI/CQTaskThread.cpp.new + mv copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + touch -r copasi/UI/CQTaskMethodWidget.cpp copasi/UI/CQTaskMethodWidget.cpp.new + mv copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + touch -r copasi/UI/CQTaskHeaderWidget.cpp copasi/UI/CQTaskHeaderWidget.cpp.new + mv copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + touch -r copasi/UI/CQTaskBtnWidget.cpp copasi/UI/CQTaskBtnWidget.cpp.new + mv copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + touch -r copasi/UI/CQTableWidget.cpp copasi/UI/CQTableWidget.cpp.new + mv copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + touch -r copasi/UI/CQTableView.cpp copasi/UI/CQTableView.cpp.new + mv copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + touch -r copasi/UI/CQTabWidget.cpp copasi/UI/CQTabWidget.cpp.new + mv copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + touch -r copasi/UI/CQTSSAWidget.cpp copasi/UI/CQTSSAWidget.cpp.new + mv copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + touch -r copasi/UI/CQTSSATimeScaleWidget.cpp copasi/UI/CQTSSATimeScaleWidget.cpp.new + mv copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + touch -r copasi/UI/CQTSSAResultWidget.cpp copasi/UI/CQTSSAResultWidget.cpp.new + mv copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + touch -r copasi/UI/CQTSSAResultSubWidget.cpp copasi/UI/CQTSSAResultSubWidget.cpp.new + mv copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + touch -r copasi/UI/CQSteadyStateResult.cpp copasi/UI/CQSteadyStateResult.cpp.new + mv copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + touch -r copasi/UI/CQStartValueReset.cpp copasi/UI/CQStartValueReset.cpp.new + mv copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + touch -r copasi/UI/CQSplashWidget.cpp copasi/UI/CQSplashWidget.cpp.new + mv copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + touch -r copasi/UI/CQSpinBoxDelegate.cpp copasi/UI/CQSpinBoxDelegate.cpp.new + mv copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + touch -r copasi/UI/CQSpeciesWidget.cpp copasi/UI/CQSpeciesWidget.cpp.new + mv copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + touch -r copasi/UI/CQSpeciesDetail.cpp copasi/UI/CQSpeciesDetail.cpp.new + mv copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + touch -r copasi/UI/CQSpecieDM.cpp copasi/UI/CQSpecieDM.cpp.new + mv copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + touch -r copasi/UI/CQSortFilterProxyModel.cpp copasi/UI/CQSortFilterProxyModel.cpp.new + mv copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + touch -r copasi/UI/CQSimpleSelectionTree.cpp copasi/UI/CQSimpleSelectionTree.cpp.new + mv copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + touch -r copasi/UI/CQSensResultWidget.cpp copasi/UI/CQSensResultWidget.cpp.new + mv copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + touch -r copasi/UI/CQScrolledDependenciesWidget.cpp copasi/UI/CQScrolledDependenciesWidget.cpp.new + mv copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + touch -r copasi/UI/CQScanWidgetParameterSet.cpp copasi/UI/CQScanWidgetParameterSet.cpp.new + mv copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + touch -r copasi/UI/CQSEDMLImportDialog.cpp copasi/UI/CQSEDMLImportDialog.cpp.new + mv copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + touch -r copasi/UI/CQSEDMLFileDialog.cpp copasi/UI/CQSEDMLFileDialog.cpp.new + mv copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + touch -r copasi/UI/CQSBMLFileDialog.cpp copasi/UI/CQSBMLFileDialog.cpp.new + mv copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + touch -r copasi/UI/CQReportsWidget.cpp copasi/UI/CQReportsWidget.cpp.new + mv copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + touch -r copasi/UI/CQReportListItem.cpp copasi/UI/CQReportListItem.cpp.new + mv copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + touch -r copasi/UI/CQReportDefinitionSelect.cpp copasi/UI/CQReportDefinitionSelect.cpp.new + mv copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + touch -r copasi/UI/CQReportDefinition.cpp copasi/UI/CQReportDefinition.cpp.new + mv copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + touch -r copasi/UI/CQReportDM.cpp copasi/UI/CQReportDM.cpp.new + mv copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + touch -r copasi/UI/CQReactionsWidget.cpp copasi/UI/CQReactionsWidget.cpp.new + mv copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + touch -r copasi/UI/CQReactionDM.cpp copasi/UI/CQReactionDM.cpp.new + mv copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + touch -r copasi/UI/CQPushButtonDelegate.cpp copasi/UI/CQPushButtonDelegate.cpp.new + mv copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + touch -r copasi/UI/CQProgressItemText.cpp copasi/UI/CQProgressItemText.cpp.new + mv copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + touch -r copasi/UI/CQProgressItemBar.cpp copasi/UI/CQProgressItemBar.cpp.new + mv copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + touch -r copasi/UI/CQProgressItem.cpp copasi/UI/CQProgressItem.cpp.new + mv copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + touch -r copasi/UI/CQProgressDialog.cpp copasi/UI/CQProgressDialog.cpp.new + mv copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + touch -r copasi/UI/CQPreferenceDialog.cpp copasi/UI/CQPreferenceDialog.cpp.new + mv copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + touch -r copasi/UI/CQPlotsWidget.cpp copasi/UI/CQPlotsWidget.cpp.new + mv copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + touch -r copasi/UI/CQPlotDM.cpp copasi/UI/CQPlotDM.cpp.new + mv copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + touch -r copasi/UI/CQParameterSetsWidget.cpp copasi/UI/CQParameterSetsWidget.cpp.new + mv copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + touch -r copasi/UI/CQParameterSetsDM.cpp copasi/UI/CQParameterSetsDM.cpp.new + mv copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + touch -r copasi/UI/CQParameterResultItemModel.cpp copasi/UI/CQParameterResultItemModel.cpp.new + mv copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + touch -r copasi/UI/CQParameterOverviewWidget.cpp copasi/UI/CQParameterOverviewWidget.cpp.new + mv copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + touch -r copasi/UI/CQParameterOverviewDM.cpp copasi/UI/CQParameterOverviewDM.cpp.new + mv copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + touch -r copasi/UI/CQParameterGroupView.cpp copasi/UI/CQParameterGroupView.cpp.new + mv copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + touch -r copasi/UI/CQParameterGroupDM.cpp copasi/UI/CQParameterGroupDM.cpp.new + mv copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + touch -r copasi/UI/CQParameterEstimationResult.cpp copasi/UI/CQParameterEstimationResult.cpp.new + mv copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + touch -r copasi/UI/CQOscillationTaskWidget.cpp copasi/UI/CQOscillationTaskWidget.cpp.new + mv copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + touch -r copasi/UI/CQOptimizationWidget.cpp copasi/UI/CQOptimizationWidget.cpp.new + mv copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + touch -r copasi/UI/CQOptimizationResult.cpp copasi/UI/CQOptimizationResult.cpp.new + mv copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + touch -r copasi/UI/CQOptPopulation.cpp copasi/UI/CQOptPopulation.cpp.new + mv copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + touch -r copasi/UI/CQNotes.cpp copasi/UI/CQNotes.cpp.new + mv copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + touch -r copasi/UI/CQNameSelectionDialog.cpp copasi/UI/CQNameSelectionDialog.cpp.new + mv copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + touch -r copasi/UI/CQMultipleSelectionDialog.cpp copasi/UI/CQMultipleSelectionDialog.cpp.new + mv copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + touch -r copasi/UI/CQMoietiesTaskWidget.cpp copasi/UI/CQMoietiesTaskWidget.cpp.new + mv copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + touch -r copasi/UI/CQMoietiesTaskResult.cpp copasi/UI/CQMoietiesTaskResult.cpp.new + mv copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + touch -r copasi/UI/CQModelWidget.cpp copasi/UI/CQModelWidget.cpp.new + mv copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + touch -r copasi/UI/CQModelValue.cpp copasi/UI/CQModelValue.cpp.new + mv copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + touch -r copasi/UI/CQMmlScrollView.cpp copasi/UI/CQMmlScrollView.cpp.new + mv copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + touch -r copasi/UI/CQMessageBox.cpp copasi/UI/CQMessageBox.cpp.new + mv copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + touch -r copasi/UI/CQMergingData.cpp copasi/UI/CQMergingData.cpp.new + mv copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + touch -r copasi/UI/CQMatrixDialog.cpp copasi/UI/CQMatrixDialog.cpp.new + mv copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + touch -r copasi/UI/CQMathMatrixWidget.cpp copasi/UI/CQMathMatrixWidget.cpp.new + mv copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + touch -r copasi/UI/CQMCAWidget.cpp copasi/UI/CQMCAWidget.cpp.new + mv copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + touch -r copasi/UI/CQLyapWidget.cpp copasi/UI/CQLyapWidget.cpp.new + mv copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + touch -r copasi/UI/CQLyapResultWidget.cpp copasi/UI/CQLyapResultWidget.cpp.new + mv copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + touch -r copasi/UI/CQLayoutsWidget.cpp copasi/UI/CQLayoutsWidget.cpp.new + mv copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + touch -r copasi/UI/CQLayoutsDM.cpp copasi/UI/CQLayoutsDM.cpp.new + mv copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + touch -r copasi/UI/CQLNAWidget.cpp copasi/UI/CQLNAWidget.cpp.new + mv copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + touch -r copasi/UI/CQGlobalQuantityDM.cpp copasi/UI/CQGlobalQuantityDM.cpp.new + mv copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + touch -r copasi/UI/CQGlobalQuantitiesWidget.cpp copasi/UI/CQGlobalQuantitiesWidget.cpp.new + mv copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + touch -r copasi/UI/CQFunctionsWidget.cpp copasi/UI/CQFunctionsWidget.cpp.new + mv copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + touch -r copasi/UI/CQFunctionDM.cpp copasi/UI/CQFunctionDM.cpp.new + mv copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + touch -r copasi/UI/CQFluxModeDM.cpp copasi/UI/CQFluxModeDM.cpp.new + mv copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + touch -r copasi/UI/CQFittingWidget.cpp copasi/UI/CQFittingWidget.cpp.new + mv copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + touch -r copasi/UI/CQFittingResultTab1.cpp copasi/UI/CQFittingResultTab1.cpp.new + mv copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + touch -r copasi/UI/CQFittingResult.cpp copasi/UI/CQFittingResult.cpp.new + mv copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + touch -r copasi/UI/CQFittingItemWidget.cpp copasi/UI/CQFittingItemWidget.cpp.new + mv copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + touch -r copasi/UI/CQExpressionWidget.cpp copasi/UI/CQExpressionWidget.cpp.new + mv copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + touch -r copasi/UI/CQExpressionMmlStackedWidget.cpp copasi/UI/CQExpressionMmlStackedWidget.cpp.new + mv copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + touch -r copasi/UI/CQExperimentSelection.cpp copasi/UI/CQExperimentSelection.cpp.new + mv copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + touch -r copasi/UI/CQExperimentData.cpp copasi/UI/CQExperimentData.cpp.new + mv copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + touch -r copasi/UI/CQExpandModelData.cpp copasi/UI/CQExpandModelData.cpp.new + mv copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + touch -r copasi/UI/CQEventsWidget.cpp copasi/UI/CQEventsWidget.cpp.new + mv copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + touch -r copasi/UI/CQEventWidget1.cpp copasi/UI/CQEventWidget1.cpp.new + mv copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + touch -r copasi/UI/CQEventDM.cpp copasi/UI/CQEventDM.cpp.new + mv copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + touch -r copasi/UI/CQEFMWidget.cpp copasi/UI/CQEFMWidget.cpp.new + mv copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + touch -r copasi/UI/CQEFMSpeciesDM.cpp copasi/UI/CQEFMSpeciesDM.cpp.new + mv copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + touch -r copasi/UI/CQEFMResultWidget.cpp copasi/UI/CQEFMResultWidget.cpp.new + mv copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + touch -r copasi/UI/CQEFMReactionDM.cpp copasi/UI/CQEFMReactionDM.cpp.new + mv copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + touch -r copasi/UI/CQEFMNetReactionDM.cpp copasi/UI/CQEFMNetReactionDM.cpp.new + mv copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + touch -r copasi/UI/CQEFMListWidget.cpp copasi/UI/CQEFMListWidget.cpp.new + mv copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + touch -r copasi/UI/CQDifferentialEquations.cpp copasi/UI/CQDifferentialEquations.cpp.new + mv copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + touch -r copasi/UI/CQDependencyWidget.cpp copasi/UI/CQDependencyWidget.cpp.new + mv copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + touch -r copasi/UI/CQDependencyDialog.cpp copasi/UI/CQDependencyDialog.cpp.new + mv copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + touch -r copasi/UI/CQDependenciesWidget.cpp copasi/UI/CQDependenciesWidget.cpp.new + mv copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + touch -r copasi/UI/CQDateTimeEditDelegate.cpp copasi/UI/CQDateTimeEditDelegate.cpp.new + mv copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + touch -r copasi/UI/CQCrossSectionTaskWidget.cpp copasi/UI/CQCrossSectionTaskWidget.cpp.new + mv copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + touch -r copasi/UI/CQCopasiApplication.cpp copasi/UI/CQCopasiApplication.cpp.new + mv copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + touch -r copasi/UI/CQCompartmentsWidget.cpp copasi/UI/CQCompartmentsWidget.cpp.new + mv copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + touch -r copasi/UI/CQCompartmentDM.cpp copasi/UI/CQCompartmentDM.cpp.new + mv copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + touch -r copasi/UI/CQCompartmentCopyOptions.cpp copasi/UI/CQCompartmentCopyOptions.cpp.new + mv copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + touch -r copasi/UI/CQCompartment.cpp copasi/UI/CQCompartment.cpp.new + mv copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + touch -r copasi/UI/CQComboDelegate.cpp copasi/UI/CQComboDelegate.cpp.new + mv copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + touch -r copasi/UI/CQCheckModelWindow.cpp copasi/UI/CQCheckModelWindow.cpp.new + mv copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + touch -r copasi/UI/CQBrowserPaneDM.cpp copasi/UI/CQBrowserPaneDM.cpp.new + mv copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + touch -r copasi/UI/CQBrowserPane.cpp copasi/UI/CQBrowserPane.cpp.new + mv copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + touch -r copasi/UI/CQBaseTreeDataModel.cpp copasi/UI/CQBaseTreeDataModel.cpp.new + mv copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + touch -r copasi/UI/CQBaseDataModel.cpp copasi/UI/CQBaseDataModel.cpp.new + mv copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + touch -r copasi/UI/CQArrayAnnotationsWidgetDM.cpp copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new + mv copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + touch -r copasi/UI/CQArrayAnnotationsWidget.cpp copasi/UI/CQArrayAnnotationsWidget.cpp.new + mv copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + touch -r copasi/UI/CQAnalyticsWidget.cpp copasi/UI/CQAnalyticsWidget.cpp.new + mv copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + touch -r copasi/UI/CProvenanceDialog.cpp copasi/UI/CProvenanceDialog.cpp.new + mv copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + touch -r copasi/UI/CProgressBar.cpp copasi/UI/CProgressBar.cpp.new + mv copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + touch -r copasi/UI/CMCAResultWidget.cpp copasi/UI/CMCAResultWidget.cpp.new + mv copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + touch -r copasi/UI/CMCAResultSubwidget.cpp copasi/UI/CMCAResultSubwidget.cpp.new + mv copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + touch -r copasi/UI/CLNAResultWidget.cpp copasi/UI/CLNAResultWidget.cpp.new + mv copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + touch -r copasi/UI/CLNAResultSubwidget.cpp copasi/UI/CLNAResultSubwidget.cpp.new + mv copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + touch -r copasi/UI/CEntityProvenanceDialog.cpp copasi/UI/CEntityProvenanceDialog.cpp.new + mv copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + touch -r copasi/UI/CCopasiSelectionWidget.cpp copasi/UI/CCopasiSelectionWidget.cpp.new + mv copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + touch -r copasi/UI/CCopasiSelectionDialog.cpp copasi/UI/CCopasiSelectionDialog.cpp.new + mv copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlotSelectionDialog.cpp copasi/UI/CCopasiPlotSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlot2YSelectionDialog.cpp copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + touch -r copasi/UI/CColorScale.cpp copasi/UI/CColorScale.cpp.new + mv copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + touch -r copasi/UI/AboutDialog.cpp copasi/UI/AboutDialog.cpp.new + mv copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + touch -r copasi/Provenance/CProvenanceXMLWriter.cpp copasi/Provenance/CProvenanceXMLWriter.cpp.new + mv copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + touch -r copasi/OpenMP/CRandomContext.cpp copasi/OpenMP/CRandomContext.cpp.new + mv copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + touch -r copasi/OpenMP/CMathContext.cpp copasi/OpenMP/CMathContext.cpp.new + mv copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + touch -r copasi/OpenMP/CContext.cpp copasi/OpenMP/CContext.cpp.new + mv copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + touch -r copasi/MIRIAMUI/CQReferenceDM.cpp copasi/MIRIAMUI/CQReferenceDM.cpp.new + mv copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeViewItem.cpp copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeView.cpp copasi/MIRIAMUI/CQRDFTreeView.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + touch -r copasi/MIRIAMUI/CQModifiedDM.cpp copasi/MIRIAMUI/CQModifiedDM.cpp.new + mv copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + touch -r copasi/MIRIAMUI/CQMiriamWidget.cpp copasi/MIRIAMUI/CQMiriamWidget.cpp.new + mv copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + touch -r copasi/MIRIAMUI/CQCreatorDM.cpp copasi/MIRIAMUI/CQCreatorDM.cpp.new + mv copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + touch -r copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new + mv copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + touch -r copasi/MIRIAM/CReference.cpp copasi/MIRIAM/CReference.cpp.new + mv copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + touch -r copasi/MIRIAM/CRaptorInit.cpp copasi/MIRIAM/CRaptorInit.cpp.new + mv copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + touch -r copasi/MIRIAM/CRDFWriter.cpp copasi/MIRIAM/CRDFWriter.cpp.new + mv copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + touch -r copasi/MIRIAM/CRDFUtilities.cpp copasi/MIRIAM/CRDFUtilities.cpp.new + mv copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + touch -r copasi/MIRIAM/CRDFTriplet.cpp copasi/MIRIAM/CRDFTriplet.cpp.new + mv copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + touch -r copasi/MIRIAM/CRDFSubject.cpp copasi/MIRIAM/CRDFSubject.cpp.new + mv copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + touch -r copasi/MIRIAM/CRDFPredicate.cpp copasi/MIRIAM/CRDFPredicate.cpp.new + mv copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + touch -r copasi/MIRIAM/CRDFParser.cpp copasi/MIRIAM/CRDFParser.cpp.new + mv copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + touch -r copasi/MIRIAM/CRDFObject.cpp copasi/MIRIAM/CRDFObject.cpp.new + mv copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + touch -r copasi/MIRIAM/CRDFNode.cpp copasi/MIRIAM/CRDFNode.cpp.new + mv copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + touch -r copasi/MIRIAM/CRDFLiteral.cpp copasi/MIRIAM/CRDFLiteral.cpp.new + mv copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + touch -r copasi/MIRIAM/CRDFGraphConverter.cpp copasi/MIRIAM/CRDFGraphConverter.cpp.new + mv copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + touch -r copasi/MIRIAM/CRDFGraph.cpp copasi/MIRIAM/CRDFGraph.cpp.new + mv copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + touch -r copasi/MIRIAM/CModified.cpp copasi/MIRIAM/CModified.cpp.new + mv copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + touch -r copasi/MIRIAM/CModelMIRIAMInfo.cpp copasi/MIRIAM/CModelMIRIAMInfo.cpp.new + mv copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + touch -r copasi/MIRIAM/CMIRIAMResource.cpp copasi/MIRIAM/CMIRIAMResource.cpp.new + mv copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + touch -r copasi/MIRIAM/CCreator.cpp copasi/MIRIAM/CCreator.cpp.new + mv copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + touch -r copasi/MIRIAM/CConstants.cpp copasi/MIRIAM/CConstants.cpp.new + mv copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + touch -r copasi/MIRIAM/CBiologicalDescription.cpp copasi/MIRIAM/CBiologicalDescription.cpp.new + mv copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + touch -r copasi/CopasiUI/main.cpp copasi/CopasiUI/main.cpp.new + mv copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + touch -r copasi/CopasiSE/CopasiSE.cpp copasi/CopasiSE/CopasiSE.cpp.new + mv copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + touch -r copasi/CopasiSBW/SBWTranslator.cpp copasi/CopasiSBW/SBWTranslator.cpp.new + mv copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + touch -r copasi/CopasiDataModel/CInfo.cpp copasi/CopasiDataModel/CInfo.cpp.new + mv copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + touch -r copasi/CopasiDataModel/CDataModel.cpp copasi/CopasiDataModel/CDataModel.cpp.new + mv copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + touch -r copasi/ABiochem/wattstrog.cpp copasi/ABiochem/wattstrog.cpp.new + mv copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + touch -r copasi/ABiochem/clo.cpp copasi/ABiochem/clo.cpp.new + mv copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + touch -r copasi/ABiochem/abiochem.cpp copasi/ABiochem/abiochem.cpp.new + mv copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + touch -r copasi/ABiochem/ab.cpp copasi/ABiochem/ab.cpp.new + mv copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + touch -r copasi/ABiochem/Erdos.cpp copasi/ABiochem/Erdos.cpp.new + mv copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + touch -r copasi/ABiochem/CGene.cpp copasi/ABiochem/CGene.cpp.new + mv copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + touch -r copasi/ABiochem/1d.cpp copasi/ABiochem/1d.cpp.new + mv copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + echo 'Patch #0 (COPASI-fix_install_libpaths.patch):' Patch #0 (COPASI-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 879 (offset 36 lines). patching file copasi/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 164 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 158 (offset 5 lines). Hunk #2 succeeded at 175 (offset 5 lines). patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 163 (offset -2 lines). patching file copasi/bindings/java/CMakeLists.txt Hunk #1 succeeded at 159 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/octave/CMakeLists.txt Hunk #1 succeeded at 153 (offset 6 lines). + echo 'Patch #4 (COPASI-fix_exe_permissions.patch):' Patch #4 (COPASI-fix_exe_permissions.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_exe_permissions --fuzz=0 patching file copasi/CopasiSE/CMakeLists.txt patching file copasi/CopasiUI/CMakeLists.txt Hunk #1 succeeded at 122 (offset 13 lines). Patch #6 (COPASI-libCombine_paths.patch): + echo 'Patch #6 (COPASI-libCombine_paths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .libCombine_paths --fuzz=0 patching file CMakeModules/FindLIBCOMBINE.cmake Hunk #3 succeeded at 147 (offset 25 lines). Patch #7 (COPASI-find_crossguid2.patch): + echo 'Patch #7 (COPASI-find_crossguid2.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_crossguid2 --fuzz=0 patching file CMakeModules/FindCROSSGUID.cmake Hunk #2 succeeded at 35 (offset 1 line). Hunk #3 succeeded at 54 (offset 2 lines). Hunk #4 succeeded at 86 (offset 3 lines). Patch #8 (COPASI-use_c++17.patch): + echo 'Patch #8 (COPASI-use_c++17.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .use_c++17 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 129 (offset 11 lines). Patch #9 (COPASI-find_libsedml.patch): + echo 'Patch #9 (COPASI-find_libsedml.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_libsedml --fuzz=0 patching file CMakeModules/FindLIBSEDML.cmake Patch #10 (COPASI-find_sbw.patch): + echo 'Patch #10 (COPASI-find_sbw.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_sbw --fuzz=0 patching file CMakeModules/FindSBW.cmake Patch #12 (COPASI-find_raptor.patch): + echo 'Patch #12 (COPASI-find_raptor.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .find_raptor --fuzz=0 patching file CMakeModules/FindRAPTOR.cmake Patch #13 (COPASI-qwt62.patch): + echo 'Patch #13 (COPASI-qwt62.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .qwt --fuzz=0 patching file copasi/plotUI/C2DCurveData.h patching file copasi/plotUI/C2DPlotCurve.h patching file copasi/plotUI/CBandedGraphData.h patching file copasi/plotUI/CHistoCurveData.h patching file copasi/plotUI/CLinearColorMap.h patching file copasi/plotUI/CPlotSpectogram.h patching file copasi/plotUI/CQwtPlot.cpp patching file copasi/plotUI/CQwtPlot.h patching file copasi/plotUI/CSpectorgramData.h patching file copasi/plotUI/scrollzoomer.cpp patching file copasi/plotUI/scrollzoomer.h Patch #14 (COPASI-4.41.283-fix_missing_header.patch): + echo 'Patch #14 (COPASI-4.41.283-fix_missing_header.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/plotUI/CQMarchingSquares.cpp Patch #15 (COPASI-find_qcp_libs.patch): + echo 'Patch #15 (COPASI-find_qcp_libs.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file CMakeModules/FindQCP.cmake Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch): + echo 'Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/bindings/common/downcast_common.cpp Patch #11 (COPASI-porting_to_python310.patch): + echo 'Patch #11 (COPASI-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 156 (offset 3 lines). Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch): + echo 'Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file CMakeModules/FindQWT.cmake Hunk #1 succeeded at 19 (offset -5 lines). Hunk #2 succeeded at 30 (offset -5 lines). patching file CMakeModules/FindMML.cmake + sed -e 's|@@libdir@@|/usr/lib64|g' -i CMakeModules/FindQWT.cmake Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch): + echo 'Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .QWTPLOT3D_QT5 --fuzz=0 patching file CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_includedir@@|/usr/include/qt5/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_libdir@@|/usr/lib64|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@_libmml_includedir@@|/usr/include/qt5/libmml-qt5|g' -i CMakeModules/FindMML.cmake + sed -e 's|@@_libmml_libdir@@|/usr/lib64|g' -i CMakeModules/FindMML.cmake + sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp + sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.IWM0g1 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=4.42.284 -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.12 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.12.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DENABLE_JIT:BOOL=OFF -DSELECT_QT=Qt5 -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG' -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=/usr/lib64/cmake '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake-qt5 -DQWT_VERSION_STRING:STRING=6.2.0 -DQWT_LIBRARY:FILEPATH=/usr/lib64/libqwt-qt5.so -DQWT_INCLUDE_DIR:PATH=/usr/include/qt5/qwt -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON -DMML_INCLUDE_DIR:PATH=/usr/include/qt5/libmml-qt5 -DMML_LIBRARY:FILEPATH=/usr/lib64/libmml.so -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic -DBLAS_blas_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DLAPACK_lapack_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DCROSSGUID_INCLUDE_DIR:PATH=/usr/include/crossguid2 -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON -DLIBSBML_INCLUDE_DIR:PATH=/usr/include/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBNUML_LIBRARY:FILEPATH=/usr/lib64/libnuml.so -DEXTRA_INCLUDE_DIRS:STRING=-I/usr/include/numl -DEXPAT_LIBRARY:FILEPATH=/usr/lib64/libexpat.so -DEXPAT_INCLUDE_DIR:PATH=/usr/include -DF2C_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DENABLE_GPROF:BOOL=OFF -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=/usr/bin/bison -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCOPASI_USE_QCUSTOMPLOT:BOOL=ON CMake Warning: No source or binary directory provided. Both will be assumed to be the same as the current working directory, but note that this warning will become a fatal error in future CMake releases. -- The C compiler identification is GNU 14.0.1 -- The CXX compiler identification is GNU 14.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for strptime -- Looking for strptime - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of size_t -- Check size of size_t - done -- Performing Test EXPAT_EXPAT_TEST -- Performing Test EXPAT_EXPAT_TEST - Success -- Found EXPAT: /usr/lib64/libexpat.so (found version "2.5.0") -- Found LIBSBML: sbml -- Found LIBSEDML: /lib64/libsedml.so (found version "2.0.32") -- Found LIBCOMBINE: /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat (found version "0.2.20") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Found BISON: /usr/bin/bison (found version "3.8.2") -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- Found CLAPACK: /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Found LIBUUID: /usr/lib64/libuuid.so (found version "2.39.3") -- Found CROSSGUID: /usr/include/crossguid2 -- Found RAPTOR: /usr/lib64/libraptor.so (found version "1.4.21") -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found QCP: /usr/lib64/libqcustomplot-qt5.so -- Using Qt5 -- Found QWT: /usr/lib64/libqwt-qt5.so -- Found MML: /usr/lib64/libmml.so -- Found SBW: //usr/lib64/libSBW.so -- Found SWIG: /usr/bin/swig (found version "4.1.1") -- Mocing with options: -DWITH_TIME_SENS=1;-DWITH_QT5_VISUALIZATION=1;-DCOPASI_SBW_INTEGRATION=1;-DCOPASI_BANDED_GRAPH=1;-DCOPASI_NONLIN_DYN_OSCILLATION=1;-DQT_USE_TEXTBROWSER=1;-DCOPASI_USE_QWT=1;-DCOPASI_USE_QCUSTOMPLOT=1;-DQWT_VERSION=0x060200 -- Mocing files for subdir: barChart -- Mocing files for subdir: layoutUI -- Mocing files for subdir: MIRIAMUI -- Mocing files for subdir: plotUI -- Mocing files for subdir: tex -- Mocing files for subdir: UI -- Mocing files for subdir: wizard -- Mocing files for subdir: qlayout -- Mocing files for subdir: undoFramework -- Mocing files for subdir: undoUI -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /lib64/libz.so (found version "1.3.0.zlib-ng") -- Found PythonInterp: /usr/bin/python3 (found version "3.12.1") -- Found PythonLibs: /usr/lib64/libpython3.12.so (found version "3.12.1") -- Found Python: /usr/bin/python3.12 (found version "3.12.1") found components: Interpreter -- ----------------------------------------------------------- Building COPASI 4.42.284 (Release) Source Dir = /builddir/build/BUILD/COPASI-Build-284 Binary Dir = /builddir/build/BUILD/COPASI-Build-284 Install Prefix = /usr Dependencies: Vendor = Generic LAPACK Libs = /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so LAPACK LDFLAGS = crossguid Libs = /lib64/libcrossguid2.so;/usr/lib64/libuuid.so cross include = /usr/include/crossguid2 Expat version = 2.5.0 Expat Libs = /usr/lib64/libexpat.so Expat include = /usr/include Raptor version = 1.4.21 Raptor Libs = /usr/lib64/libraptor.so Raptor include = /usr/include libSBML version = libSBML lib = /usr/lib64/libsbml.so libSBML include = /usr/include/sbml Qt version = 5.15.12 Qt lib = Qt5::Concurrent;Qt5::Core;Qt5::Gui;Qt5::Widgets;Qt5::Network;Qt5::OpenGL;Qt5::PrintSupport;Qt5::Svg;Qt5::Xml;Qt5::DataVisualization Qt include = /usr/include/qt5/;/usr/include/qt5/QtConcurrent;/usr/include/qt5/QtCore;/usr/lib64/qt5//mkspecs/linux-g++;/usr/include/qt5/QtGui;/usr/include/qt5/QtWidgets;/usr/include/qt5/QtNetwork;/usr/include/qt5/QtOpenGL;/usr/include/qt5/QtPrintSupport;/usr/include/qt5/QtSvg;/usr/include/qt5/QtXml;/usr/include/qt5/QtDataVisualization QWT version = 6.2.0 (0x60200) QWT lib = /usr/lib64/libqwt-qt5.so QWT include = /usr/include/qt5/qwt qwtplot3d lib = qwtplot3d include = qtmml lib = /usr/lib64/libmml.so qtmml include = /usr/include/qt5/libmml-qt5 SBW version = SBW lib = //usr/lib64/libSBW.so SBW include = /usr/include libSEDML version = 2.0.32 libSEDML lib = /lib64/libsedml.so libSEDML include = /usr/include Combine version = 0.2.20 Combine lib = /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat Combine include = /usr/include NativeJIT lib = NativeJIT include = NativeJIT CXX Flags = cpu_features lib = cpu_features include = OpenMP Libs = OpenMP CXX Flags = Options: COPASI_EXTUNIT = ON SBW integration = ON Model Merging = ON SEDML support = ON Combine Archive support = ON SDE support = ON GPROF support = OFF UNDO framework = ON Versioning framework = OFF Provenance framework = OFF Analytics Task = OFF Time Sensitivities task = ON JIT Compilation = OFF OpenMP = OFF CXX Flags = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC Additional Defines = Linux;HAVE_F2C_H;LINUX Language Bindings: SWIG = /usr/bin/swig .NET Bindings = OFF Java Bindings = OFF Python Bindings = ON Perl Bindings = OFF Octave Bindings = OFF R Bindings = OFF Building: COPASI SE = ON COPASI UI = ON C++ Examples = OFF SBML TestRunner = OFF Franks TestRunner = OFF Semantic Testsuite = OFF Stochastic Testsuite = OFF Steady State TestRunner = OFF MCA TestRunner = OFF ----------------------------------------------------------- -- Configuring done (4.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP COPASI_OVERWRITE_USE_LAPACK CSHARP_COMPILER ENABLE_COPASI_SEDML ENABLE_USE_MATH_CONTAINER ENABLE_USE_SBMLUNIT ENABLE_WITH_MERGEMODEL QT_QMAKE_EXECUTABLE SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/COPASI-Build-284 + /usr/bin/cmake --build . -j4 --verbose Change Dir: '/builddir/build/BUILD/COPASI-Build-284' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/COPASI-Build-284 -B/builddir/build/BUILD/COPASI-Build-284 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles /builddir/build/BUILD/COPASI-Build-284//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-core.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Nothing to be done for 'copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/build [ 0%] Built target binding_python_swig gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CConstants.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:452:56: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 452 | static_cast< CTrajectoryTask * >(&mData.pTaskList->operator[]("Time-Course"))->load(inbuf); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::openCombineArchive(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2222:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2222 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2249:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2249 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2266:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2266 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2071:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2071 | bool result = true; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::importSEDML(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2395:17: warning: unused variable ‘pSEDMLDocument’ [-Wunused-variable] 2395 | SedDocument * pSEDMLDocument = NULL; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2399:18: warning: unused variable ‘pSBMLDocument’ [-Wunused-variable] 2399 | SBMLDocument * pSBMLDocument = NULL; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2400:20: warning: unused variable ‘pLol’ [-Wunused-variable] 2400 | CListOfLayouts * pLol = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2401:29: warning: unused variable ‘pLotList’ [-Wunused-variable] 2401 | COutputDefinitionVector * pLotList = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::exportSEDML(const std::string&, bool, int, int, bool, bool, CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2593:17: warning: unused variable ‘pOrigSEDMLDocument’ [-Wunused-variable] 2593 | SedDocument * pOrigSEDMLDocument = NULL; | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:434:1: warning: when initialized here [-Wreorder] 434 | CMIRIAMResource::CMIRIAMResource(const std::string & name, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:446:1: warning: when initialized here [-Wreorder] 446 | CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:458:1: warning: when initialized here [-Wreorder] 458 | CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup & group, | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraphConverter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFLiteral.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFNode.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFObject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFParser.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFPredicate.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFSubject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFTriplet.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFUtilities.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRaptorInit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp: In member function ‘char* CRDFWriter::write(const CRDFGraph*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp:99:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 99 | bool success = true; | ^~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArrayElementReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCommonName.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp: In member function ‘void CDataObjectMap::objectRenamed(CDataObject*, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp:301:16: warning: unused variable ‘success’ [-Wunused-variable] 301 | bool success = (itMap->second.erase(pObject) > 0); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRegisteredCommonName.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CLocaleString.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:114:1: warning: when initialized here [-Wreorder] 114 | CConfigurationFile::CConfigurationFile(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const CConfigurationFile&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:148:1: warning: when initialized here [-Wreorder] 148 | CConfigurationFile::CConfigurationFile(const CConfigurationFile & src, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptionParser.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h: In constructor ‘CRootContainer::CRootContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:75:23: warning: ‘CRootContainer::mpUnitDefinitionList’ will be initialized after [-Wreorder] 75 | CUnitDefinitionDB * mpUnitDefinitionList; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:73:23: warning: ‘CConfigurationFile* CRootContainer::mpConfiguration’ [-Wreorder] 73 | CConfigurationFile* mpConfiguration; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:38:1: warning: when initialized here [-Wreorder] 38 | CRootContainer::CRootContainer(const bool & withGUI): | ^~~~~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalBase.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalCall.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoiceLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFraction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFunction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalGeneralPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItemPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLcm.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogicalItem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:39:16: required from here 39 | copySetOfSets(src.mChoices, this->mChoices); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:41:16: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 41 | copySetOfSets(src.mAndSets, this->mAndSets); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:216:18: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 216 | copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:494:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 494 | copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp: In copy constructor ‘CNormalProduct::CNormalProduct(const CNormalProduct&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp:73:12: warning: unused variable ‘result’ [-Wunused-variable] 73 | bool result = this->mItemPowers.insert(pDestItemPower).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp: In copy constructor ‘CNormalSum::CNormalSum(const CNormalSum&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:93:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 93 | bool tmpRes = mProducts.insert(new CNormalProduct(*pTmpProduct)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:102:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 102 | bool tmpRes = mFractions.insert(new CNormalFraction(**it2)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CNormalFraction* CNormalTranslation::normAndSimplifyReptdly(const CEvaluationNode*, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:175:20: warning: unused variable ‘pFraction’ [-Wunused-variable] 175 | CNormalFraction* pFraction = dynamic_cast(base0); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CEvaluationNode* CNormalTranslation::newCancel(const CEvaluationNode*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:4076:34: warning: unused variable ‘pChild2’ [-Wunused-variable] 4076 | const CEvaluationNode* pChild2 = dynamic_cast(pChild1->getSibling()); | ^~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2637:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 2637 | CNormalLogical::copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2647:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 2647 | CNormalLogical::copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:27: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘bool contains_necessary_mass_action_elements(const CDataVector&, const CNormalProduct*, const CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:1226:25: warning: unused variable ‘pDatamodel’ [-Wunused-variable] 1226 | const CDataModel* pDatamodel = dynamic_cast(pModel->getObjectParent()); | ^~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCrossSectionProblem&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp:95:21: warning: unused variable ‘pDataModel’ [-Wunused-variable] 95 | const CDataModel* pDataModel = o.getObjectDataModel(); | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘normalize_variable_names(CNormalBase*, std::map, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:266:54: warning: ‘this’ pointer is null [-Wnonnull] 266 | normalize_variable_names(&pChoice->getCondition(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:46:21: note: in a call to non-static member function ‘CNormalChoice::getCondition()’ 46 | CNormalLogical& getCondition(); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:267:59: warning: ‘this’ pointer is null [-Wnonnull] 267 | normalize_variable_names(&pChoice->getTrueExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:49:22: note: in a call to non-static member function ‘CNormalChoice::getTrueExpression()’ 49 | CNormalFraction& getTrueExpression(); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:268:60: warning: ‘this’ pointer is null [-Wnonnull] 268 | normalize_variable_names(&pChoice->getFalseExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:52:22: note: in a call to non-static member function ‘CNormalChoice::getFalseExpression()’ 52 | CNormalFraction& getFalseExpression(); | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp: In member function ‘virtual void CEFMProblem::printResult(std::ostream*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:218:62: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 218 | pTask->getSpeciesChanges(*itMode, **itSpecies); | ^ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxScore.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrix.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp: In member function ‘std::pair CEFMTask::getSpeciesChanges(const CFluxMode&, const CMetab&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:212:27: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 212 | const CMetab & metab) const | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrixColumn.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauLine.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CZeroSet.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationParser_yacc.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationLexer_lex.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from CEvaluationParser.ypp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /raid/shoops/git/COPASI/copasi/function/CEvaluationLexer.lpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::setCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:171:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 171 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::addCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:217:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 217 | switch (pFunctionParameter->getUsage()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp: In member function ‘CEvaluationNode* CDerive::deriveBranch(const CEvaluationNode*, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:508:25: warning: unused variable ‘tmpFunction’ [-Wunused-variable] 508 | const CFunction * tmpFunction = dynamic_cast(pENCall->getCalledTree()); | ^~~~~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp: In member function ‘bool CEvaluationNode::operator<(const CEvaluationNode&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:861:10: warning: enumeration value ‘UNIT’ not handled in switch [-Wswitch] 861 | switch (mainType()) | ^ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:617: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:276: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp: In member function ‘virtual ASTNode* CEvaluationNodeConstant::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 238 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:271: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual ASTNode* CEvaluationNodeFunction::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1079 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual std::string CEvaluationNodeFunction::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1507 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In constructor ‘CEvaluationNodeLogical::CEvaluationNodeLogical(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 53 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CIssue CEvaluationNodeLogical::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 123 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::getUnit(const CMathContainer&, const std::vector&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 422 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::setUnit(const CMathContainer&, const std::map&, std::map&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 458 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeLogical::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 553 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:492:10: warning: unused variable ‘i’ [-Wunused-variable] 492 | size_t i = 0; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:668: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In constructor ‘CEvaluationNodeNumber::CEvaluationNodeNumber(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 51 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In member function ‘virtual ASTNode* CEvaluationNodeNumber::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 240 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:275: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In constructor ‘CEvaluationNodeObject::CEvaluationNodeObject(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 61 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual CIssue CEvaluationNodeObject::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 130 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual const CCopasiNode >::Data& CEvaluationNodeObject::getData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 332 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual std::string CEvaluationNodeObject::getInfix(const std::vector >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 358 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘void CEvaluationNodeObject::setObjectValuePtr(double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 554 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeOperator::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | size_t i = 0, iMax = children.size(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual ASTNode* CEvaluationNodeOperator::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 508 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1503: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual std::string CEvaluationNodeOperator::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1515 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp: In constructor ‘CEvaluationNodeStructure::CEvaluationNodeStructure(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 40 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:118: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp: In member function ‘void CExpression::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:61:22: warning: unused variable ‘pObject’ [-Wunused-variable] 61 | CObjectInterface * pObject = | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/fstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/copasi.h:55, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:227: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In member function ‘bool CEvaluationTree::setTree(const ASTNode&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:635:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 635 | switch (TargetType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:619:20: warning: unused variable ‘pErrorNode’ [-Wunused-variable] 619 | CEvaluationNode *pErrorNode = NULL; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In static member function ‘static CEvaluationNode* CEvaluationTree::fromAST(const ASTNode*, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] 684 | switch (itNode->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParameters(const CFunctionParameters&, std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1197:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1197 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParametersActualValues(std::vector&, const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1229:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1229 | switch (role) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp: In member function ‘size_t CFunctionParameters::findParameterByName(const std::string&, const CFunctionParameter**) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:199:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 199 | if (ppFunctionParameter != NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:195:10: warning: unused variable ‘imax’ [-Wunused-variable] 195 | size_t imax = mParameters.size(); | ^~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CAbstractLayoutInterface.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:151: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLBase.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLColorDefinition.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStop.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStops.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImage.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp: In member function ‘RenderGroup* CLGroup::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:884:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 884 | int result; | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImageTexturizer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLinearGradient.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp: In static member function ‘static std::pair CLLayoutRenderer::calculate_intersection_point_2d(double, double, double, double, double, double, double, double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:4500:167: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 4500 | std::pair CLLayoutRenderer::calculate_intersection_point_2d(double p1x, double p1y, double sx, double sy, double p2x, double p2y, double tx, double ty) | ^ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* CLLocalRenderInformation::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:201:11: warning: unused variable ‘result’ [-Wunused-variable] 201 | int result = pLRI->addStyle(pStyle); | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRadialGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRelAbsVector.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCubicBezier.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderPoint.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp: In member function ‘void CLRenderInformationBase::addSBMLAttributes(RenderInformationBase*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:439:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 439 | int result; | ^~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLUnresolvedReferenceException.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutEngine.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp: In static member function ‘static CLayout* SBMLDocumentLoader::createLayout(const Layout&, const std::map, std::__cxx11::basic_string >&, std::map, std::__cxx11::basic_string >&, const std::map, std::__cxx11::basic_string >&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:272:10: warning: unused variable ‘count’ [-Wunused-variable] 272 | size_t count = idToKeyMap.size() + globalIdToKeyMap.size(); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp: In member function ‘int CLNAMethod::calculateCovarianceMatrixReduced()’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:303:21: warning: unused variable ‘pJacobian’ [-Wunused-variable] 303 | const C_FLOAT64 * pJacobian = mJacobianReduced.array(); | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:91:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 91 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:9: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitExpression.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:315:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 315 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer(CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:417:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 417 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createSynchronizeInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2581:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2581 | switch (pObject->getSimulationType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createApplyInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2720:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2720 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp: In member function ‘std::string CMathDependencyGraph::getDOTNodeId(const CObjectInterface*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘Noise’ not handled in switch [-Wswitch] 651 | switch (pMathObject->getValueType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘ParticleNoise’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘TransitionTime’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNodeIterator.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEnum.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp: In member function ‘void CMathDerive::initOneVar(size_t, size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:41:16: warning: unused variable ‘pVMO’ [-Wunused-variable] 41 | CMathObject* pVMO = mpContainer->getMathObject(&mpContainer->getValues()[var]); | ^~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp: In static member function ‘static CEvaluationNode* CMathEvent::CTrigger::compileLE(const CEvaluationNode*, const std::vector&, const CMath::Variables&, CRootProcessor*&, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 979 | switch (pTriggerNode->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h: In copy constructor ‘CMathEventQueue::CAction::CAction(const CMathEventQueue::CAction&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:190:23: warning: ‘CMathEventQueue::CAction::mpPriority’ will be initialized after [-Wreorder] 190 | const C_FLOAT64 * mpPriority; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:185:26: warning: ‘CVector CMathEventQueue::CAction::mValues’ [-Wreorder] 185 | CVector< C_FLOAT64 > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:85:1: warning: when initialized here [-Wreorder] 85 | CMathEventQueue::CAction::CAction(const CAction & src): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp: In constructor ‘CMathEventQueue::CAction::CAction(CMathEvent*, CMathEventQueue*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:103:10: warning: enumeration value ‘Stop’ not handled in switch [-Wswitch] 103 | switch (pEvent->getType()) | ^ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathHistory.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_construct.h:61, from /usr/include/c++/14/bits/stl_tempbuf.h:61, from /usr/include/c++/14/memory:66, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:18: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp: In member function ‘virtual CIssue CMathExpression::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 285 | switch ((*it)->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::compile(CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] 643 | switch (mValueType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createIntensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1833:22: warning: unused variable ‘pNumber’ [-Wunused-variable] 1833 | CObjectInterface * pNumber = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1834:22: warning: unused variable ‘pCompartment’ [-Wunused-variable] 1834 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createExtensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1868:22: warning: variable ‘pIntensiveValue’ set but not used [-Wunused-but-set-variable] 1868 | CObjectInterface * pIntensiveValue = NULL; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1869:22: warning: variable ‘pCompartment’ set but not used [-Wunused-but-set-variable] 1869 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_yacc.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_lex.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp: In member function ‘void CAnnotation::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:160:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 160 | switch (type) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp: In static member function ‘static void CMMLOutput::writeDifferentialEquations(std::ostream&, CModel*, bool, bool, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:284:8: warning: variable ‘hasContents’ set but not used [-Wunused-but-set-variable] 284 | bool hasContents = false; | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:61: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h: In constructor ‘CModel::CModel(CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1220:86: warning: ‘CModel::mReactionsPerSpecies’ will be initialized after [-Wreorder] 1220 | std::map < const CMetab *, std::set< std::pair< const CReaction *, C_FLOAT64 > > > mReactionsPerSpecies; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: warning: ‘CDataVectorN CModel::mValues’ [-Wreorder] 1205 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:202:1: warning: when initialized here [-Wreorder] 202 | CModel::CModel(CDataContainer* pParent): | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘bool CModel::handleUnusedMetabolites()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:928:23: warning: variable ‘pStoiEnd’ set but not used [-Wunused-but-set-variable] 928 | C_FLOAT64 * pStoi, *pStoiEnd, *pRowEnd; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp: In member function ‘CReactionResult CModelAnalyzer::checkReaction(const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:196:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 196 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2579: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In function ‘const CObjectInterface* getDependentOrNull(const std::map&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 2598 | if (it->second == index) return it->first; | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2618:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: 2618 | const CFitTask* task = dynamic_cast(&dataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘void CModel::updateInitialValues(std::set&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:3439:8: warning: unused variable ‘success’ [-Wunused-variable] 3439 | bool success = compileIfNecessary(NULL); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In member function ‘virtual CUndoObjectInterface* CModelParameterSet::insert(const CData&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:84:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 84 | switch (CModelParameter::TypeNames.toEnum(data.getProperty(CData::OBJECT_TYPE).toString(), CModelParameter::Type::unknown)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 150 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:139:1: warning: when initialized here [-Wreorder] 139 | CModelParameterSet::CModelParameterSet(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const CModelParameterSet&, const CDataContainer*, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 185 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelParameterSet::CModelParameterSet(const CModelParameterSet & src, | ^~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const std::string&, const CDataContainer*, const std::string&, const CFlags&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelEntity::CModelEntity(const std::string & name, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const CModelEntity&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:200:1: warning: when initialized here [-Wreorder] 200 | CModelEntity::CModelEntity(const CModelEntity & src, | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp: In member function ‘void CMoiety::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:122:17: warning: unused variable ‘pObject’ [-Wunused-variable] 122 | CDataObject * pObject = addObjectReference("Amount", mIAmount, CDataObject::ValueDbl); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp: In member function ‘std::string CReaction::getReactionScheme() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:2314:15: warning: unused variable ‘pModel’ [-Wunused-variable] 2314 | CDataModel* pModel = getObjectDataModel(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘CUndoData CReactionInterface::createUndoData(const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:454:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 454 | switch (framework) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:508:27: warning: unused variable ‘pObject’ [-Wunused-variable] 508 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:568:27: warning: unused variable ‘pObject’ [-Wunused-variable] 568 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::vector > CReactionInterface::getUnitVector(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1295:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1295 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getUnit(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1347:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1347 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getEffectiveKineticLawUnit() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘Default’ not handled in switch [-Wswitch] 1683 | switch (getEffectiveKineticLawUnitType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CInternalSolver.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODAR.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/Cxerrwd.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/common.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In member function ‘int CRadau5::operator()(int*, evalF, double*, double*, double*, double*, double*, double*, int*, evalJ, int*, int*, int*, evalM, int*, int*, int*, evalO, int*, double*, int*, int*, int*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:127:17: warning: unused variable ‘io___10’ [-Wunused-variable] 127 | static cilist io___10 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:128:17: warning: unused variable ‘io___12’ [-Wunused-variable] 128 | static cilist io___12 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:129:17: warning: unused variable ‘io___15’ [-Wunused-variable] 129 | static cilist io___15 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:130:17: warning: unused variable ‘io___17’ [-Wunused-variable] 130 | static cilist io___17 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:131:17: warning: unused variable ‘io___19’ [-Wunused-variable] 131 | static cilist io___19 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:132:17: warning: unused variable ‘io___24’ [-Wunused-variable] 132 | static cilist io___24 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:133:17: warning: unused variable ‘io___29’ [-Wunused-variable] 133 | static cilist io___29 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:134:17: warning: unused variable ‘io___31’ [-Wunused-variable] 134 | static cilist io___31 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:135:17: warning: unused variable ‘io___33’ [-Wunused-variable] 135 | static cilist io___33 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:136:17: warning: unused variable ‘io___36’ [-Wunused-variable] 136 | static cilist io___36 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:137:17: warning: unused variable ‘io___39’ [-Wunused-variable] 137 | static cilist io___39 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:138:17: warning: unused variable ‘io___43’ [-Wunused-variable] 138 | static cilist io___43 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:139:17: warning: unused variable ‘io___50’ [-Wunused-variable] 139 | static cilist io___50 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:140:17: warning: unused variable ‘io___52’ [-Wunused-variable] 140 | static cilist io___52 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:141:17: warning: unused variable ‘io___68’ [-Wunused-variable] 141 | static cilist io___68 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:142:17: warning: unused variable ‘io___72’ [-Wunused-variable] 142 | static cilist io___72 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In function ‘int radcor_(int*, CRadau5::evalF, double*, double*, double*, double*, double*, double*, double*, int*, CRadau5::evalJ, int*, int*, int*, CRadau5::evalM, int*, int*, CRadau5::evalO, int*, int*, int*, double*, double*, double*, double*, double*, double*, int*, int*, long int*, int*, int*, int*, long int*, double*, double*, int*, int*, int*, long int*, long int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, double*, int*, int*, int*, int*, int*, int*, int*, double*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1071:20: warning: variable ‘index1’ set but not used [-Wunused-but-set-variable] 1071 | static C_LOGICAL index1, index2, index3, caljac; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1107:17: warning: unused variable ‘io___176’ [-Wunused-variable] 1107 | static cilist io___176 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1108:17: warning: unused variable ‘io___177’ [-Wunused-variable] 1108 | static cilist io___177 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1109:17: warning: unused variable ‘io___178’ [-Wunused-variable] 1109 | static cilist io___178 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1110:17: warning: unused variable ‘io___179’ [-Wunused-variable] 1110 | static cilist io___179 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1111:17: warning: unused variable ‘io___180’ [-Wunused-variable] 1111 | static cilist io___180 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1112:17: warning: unused variable ‘io___181’ [-Wunused-variable] 1112 | static cilist io___181 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1113:17: warning: unused variable ‘io___182’ [-Wunused-variable] 1113 | static cilist io___182 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:53:14: warning: ‘c__3’ defined but not used [-Wunused-variable] 53 | static C_INT c__3 = 3; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:52:14: warning: ‘c__5’ defined but not used [-Wunused-variable] 52 | static C_INT c__5 = 5; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:51:14: warning: ‘c__1’ defined but not used [-Wunused-variable] 51 | static C_INT c__1 = 1; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:50:14: warning: ‘c__9’ defined but not used [-Wunused-variable] 50 | static C_INT c__9 = 9; | ^~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dbnorm.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dc_decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dcfode.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dewset.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dfnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dintdy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dmnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dprja.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/drcheck.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dsolsy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dstoda.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In destructor ‘CRandomContext::~CRandomContext()’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:17:1: warning: label ‘Base’ defined but not used [-Wunused-label] 17 | Base: master() = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In member function ‘void CRandomContext::init(CRandom::Type, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:28:1: warning: label ‘Base’ defined but not used [-Wunused-label] 28 | Base: master() = NULL; | ^~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9831:3: warning: "/*" within comment [-Wcomment] 9831 | /* ret_val = i1mach_(&mdperm[*k - 1]); */ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘doublereal d1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:391:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 391 | fprintf(stderr, "invalid argument: d1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int da7sst_(integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:1090:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1090 | if (v[6] > 0. && v[6] <= emax || v[6] == 0. && v[7] == 0.) | ~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dg7itb_(doublereal*, doublereal*, doublereal*, integer*, integer*, integer*, integer*, integer*, doublereal*, doublereal*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:2092:41: warning: variable ‘rstrst’ set but not used [-Wunused-but-set-variable] 2092 | static integer td1, tg1, lstgst, pp1, rstrst; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dparck_(integer*, doublereal*, integer*, integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6647:15: warning: unused variable ‘vn’ [-Wunused-variable] 6647 | static char vn[4 * 2 * 34] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6663:15: warning: unused variable ‘varnm’ [-Wunused-variable] 6663 | static char varnm[1 * 2] = ""; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6664:15: warning: unused variable ‘sh’ [-Wunused-variable] 6664 | static char sh[1 * 2] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9778:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 9778 | fprintf(stderr, "invalid argument: i1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i7mdcn_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9833:43: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 9833 | ret_val = i1mach_(&mdperm[(0 + (0 + (*k - 1 << 2))) / 4]); | ~~~^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogEntry.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp: In member function ‘void COptItem::updatePrerequisites(const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:503:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 503 | std::vector< COptItem * >::const_iterator it = influencingIntervals.begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:504:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 504 | std::vector< COptItem * >::const_iterator end = influencingIntervals.end(); | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogItem.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp: In member function ‘virtual bool COptMethodLevenbergMarquardt::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:132:28: warning: variable ‘nrhs’ set but not used [-Wunused-but-set-variable] 132 | C_INT dim, starts, info, nrhs; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:107: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 107 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:120: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 120 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:201: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 201 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:342: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 342 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:626: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 626 | #pragma omp parallel for schedule(runtime) /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 646 | #pragma omp parallel for schedule(runtime) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp: In member function ‘bool COptMethodPS::reachedStdDeviation()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:482:15: warning: unused variable ‘pEnd’ [-Wunused-variable] 482 | C_FLOAT64 * pEnd = pValue + mPopulationSize; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp: In member function ‘virtual bool COptMethodPraxis::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:99:13: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 99 | C_FLOAT64 tmp = 0.0; | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:100:13: warning: variable ‘machep’ set but not used [-Wunused-but-set-variable] 100 | C_FLOAT64 machep, stepmx, d1, d2; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp: In member function ‘bool COptMethodSS::combination()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:820:13: warning: variable ‘la’ set but not used [-Wunused-but-set-variable] 820 | C_FLOAT64 la; // for orders of magnitude | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:827:22: warning: variable ‘xprval’ set but not used [-Wunused-but-set-variable] 827 | C_FLOAT64 xnewval, xprval; // to hold temp value of "parent" in go-beyond strategy | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp: In member function ‘virtual bool COptMethodStatistics::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:93:8: warning: variable ‘Continue’ set but not used [-Wunused-but-set-variable] 93 | bool Continue = true; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp: In member function ‘int COptMethodTruncatedNewton::sFun(int*, double*, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:328:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 328 | for (size_t i = 0; i < mVariableSize; i++, g++) | ~~^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:84:1: warning: when initialized here [-Wreorder] 84 | COptProblem::COptProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const COptProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:129:1: warning: when initialized here [-Wreorder] 129 | COptProblem::COptProblem(const COptProblem & src, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual void COptProblem::calculateValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:184:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 184 | std::vector< COptItem * >::const_iterator it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:185:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 185 | std::vector< COptItem * >::const_iterator end = mpOptItems->end(); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘double COptProblem::evalMinimizeIntervals(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:826:23: warning: unused variable ‘SQRT_EPSILON’ [-Wunused-variable] 826 | static const double SQRT_EPSILON = sqrt(std::numeric_limits< double >::epsilon()); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual bool COptProblem::setSolution(const double&, const CVector&, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1014 | if (variables.size() != 0) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1158:77: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: 1158 | dynamic_cast< CDataVectorN< CCopasiTask > *>(getObjectAncestor("Vector")); /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘double CPraxis::operator()(double, double, int, int, double*, FPraxis*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:1097:11: warning: variable ‘seed’ set but not used [-Wunused-but-set-variable] 1097 | C_INT32 seed; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘CPraxis::minfit(int, double, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:337:11: warning: ‘f’ may be used uninitialized [-Wmaybe-uninitialized] 337 | if (0.0 <= f) | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:236:13: note: ‘f’ was declared here 236 | C_FLOAT64 f; | ^ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.h:53, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqn_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:387:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 387 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:391:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 391 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:401:27: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 401 | C_FLOAT64 gnorm, ftest, fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqnbc_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, double*, double*, int*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:761:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 761 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:766:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 766 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:777:13: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 777 | C_FLOAT64 fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In function ‘int initp3_(double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:2398:13: warning: variable ‘cond’ set but not used [-Wunused-but-set-variable] 2398 | C_FLOAT64 cond; | ^~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/FminBrent.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentFileInfo.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp: In member function ‘double CExperiment::getErrorMeanSD(const CObjectInterface*, const double&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:1673:20: warning: unused variable ‘pScale’ [-Wunused-variable] 1673 | const C_FLOAT64 *pScale = mScale.array() + it->second; | ^~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:342:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 342 | pTasks = dynamic_cast *>(getObjectAncestor("Vector")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual bool CFitProblem::calculate()’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1046:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1046 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1094:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1094 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1195:34: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 1195 | auto it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual void CFitProblem::updateContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1333:17: warning: variable ‘pExp’ set but not used [-Wunused-but-set-variable] 1333 | CExperiment * pExp = NULL; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotColors.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CPermutation.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CRandom.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cmt19937.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cr250.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CKeyFactory.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In constructor ‘CDataHandler::CDataHandler(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In copy constructor ‘CDataHandler::CDataHandler(const CDataHandler&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp: In member function ‘virtual void CDataHandler::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:171:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 171 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:723:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 723 | CCopasiTask * pTask = &pDataModel->getTaskList()->operator[]("Parameter Estimation"); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportBody.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp: In member function ‘virtual void CReport::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp:136:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 136 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h: In constructor ‘CReportDefinition::CReportDefinition(const CReportDefinition&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:68:20: warning: ‘CReportDefinition::mPrecision’ will be initialized after [-Wreorder] 68 | unsigned C_INT32 mPrecision; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:60:38: warning: ‘std::vector CReportDefinition::mHeaderVector’ [-Wreorder] 60 | std::vector mHeaderVector; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:143:1: warning: when initialized here [-Wreorder] 143 | CReportDefinition::CReportDefinition(const CReportDefinition & src, | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static REACTION_TYPE CCellDesignerImporter::reactionTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4866:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4866 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_LINK_TYPE CCellDesignerImporter::modificationLinkTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4954:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4954 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_TYPE CCellDesignerImporter::modificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:5022:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 5022 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static SPECIES_MODIFICATION_TYPE CCellDesignerImporter::speciesModificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:10901:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 10901 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:80: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/ConverterASTNode.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:97: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In function ‘void addSymbolComponentToUnitDefinition(UnitDefinition*, CUnit::SymbolComponent&, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3109:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3109 | if (unitKind != C_INVALID_INDEX && use_d_prefix) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3114:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3114 | if (unitKind == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘void CSBMLExporter::addInitialAssignmentsToModel(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3397:11: warning: unused variable ‘result’ [-Wunused-variable] 3397 | int result = model->addParameter(param); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘bool CSBMLExporter::createSBMLDocument(CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3741:15: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 3741 | int result; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In static member function ‘static XMLNode* CSBMLExporter::createSBMLNotes(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8125:31: warning: unused variable ‘tmp’ [-Wunused-variable] 8125 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", prefix); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8191:27: warning: unused variable ‘tmp’ [-Wunused-variable] 8191 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", ""); | ^~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLIncompatibility.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLReference.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:72: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:79: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:84: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:34: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:100: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:101: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::replaceAmountReferences(ConverterASTNode*, Model*, double, std::map&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:3620:43: warning: variable ‘pSpecies’ set but not used [-Wunused-but-set-variable] 3620 | ASTNode *pAvogadro = NULL, *pSpecies = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::applyConversionFactors()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:7861:25: warning: variable ‘pE’ set but not used [-Wunused-but-set-variable] 7861 | const CChemEqElement* pE = NULL; | ^~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::importUnitsFromSBMLDocument(Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:172:24: warning: unused variable ‘pUDef’ [-Wunused-variable] 172 | UnitDefinition * pUDef = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::checkElementUnits(const Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1042:8: warning: variable ‘inconsistentDimensionlessUnits’ set but not used [-Wunused-but-set-variable] 1042 | bool inconsistentDimensionlessUnits = false; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1043:8: warning: unused variable ‘defaultVolumeUsed’ [-Wunused-variable] 1043 | bool defaultVolumeUsed = false; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1044:8: warning: unused variable ‘defaultAreaUsed’ [-Wunused-variable] 1044 | bool defaultAreaUsed = false; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1045:8: warning: unused variable ‘defaultLengthUsed’ [-Wunused-variable] 1045 | bool defaultLengthUsed = false; | ^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUtils.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/StdException.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunit.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunitInterface.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMMLUnits.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘bool CScanMethod::loop(size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:574:10: warning: unused variable ‘failCounter’ [-Wunused-variable] 574 | size_t failCounter = 0; | ^~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘CScanItemRandom::step()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:388:22: warning: ‘Value’ may be used uninitialized [-Wmaybe-uninitialized] 388 | *mpObjectValue = Value; | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:339:13: note: ‘Value’ was declared here 339 | C_FLOAT64 Value; | ^~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:92:34: required from here 92 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp: In member function ‘bool CScanTask::processCallback()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 201 | if (success && !mOutputInSubtask) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:261:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: 261 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:492:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 492 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp: In member function ‘bool CSensMethod::initialize(CSensProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:484:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 484 | switch (mpProblem->getSubTaskType()) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CEigen.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:322:34: required from here 322 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleTargetFunctions(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 504 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleVariables(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:572:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 572 | switch (type) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp: In member function ‘virtual bool CSensTask::process(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:106:17: warning: unused variable ‘pProblem’ [-Wunused-variable] 106 | CSensProblem* pProblem = | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘void CMCAMethod::calculateUnscaledElasticities(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:226:32: warning: unused variable ‘TransientDependencies’ [-Wunused-variable] 226 | const CMathDependencyGraph & TransientDependencies = mpContainer->getTransientDependencies(); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:229:17: warning: unused variable ‘pParticleFluxObjectEnd’ [-Wunused-variable] 229 | CMathObject * pParticleFluxObjectEnd = pParticleFluxObject + numReacs; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:231:17: warning: unused variable ‘pSpeciesObjectEnd’ [-Wunused-variable] 231 | CMathObject * pSpeciesObjectEnd = pSpeciesObjectStart + numMetabs; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::calculateUnscaledConcentrationCC()’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:330:9: warning: unused variable ‘N’ [-Wunused-variable] 330 | C_INT N = (C_INT) aux2.numRows(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::scaleMCA(const bool&, double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:394:10: warning: unused variable ‘numReacs’ [-Wunused-variable] 394 | size_t numReacs = mpContainer->getParticleFluxes().size(); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:103:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 103 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:235: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:54:1: warning: when initialized here [-Wreorder] 54 | CNewtonMethod::CNewtonMethod(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CNewtonMethod&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CNewtonMethod::CNewtonMethod(const CNewtonMethod & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘std::string CNewtonMethod::targetValueToString() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 685 | switch (mTargetCriterion) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:905:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: 905 | dynamic_cast< CTrajectoryTask * >(&pDataModel->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘virtual bool CNewtonMethod::initialize(const CSteadyStateProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:858:23: warning: variable ‘pTrajectoryMethod’ set but not used [-Wunused-but-set-variable] 858 | CTrajectoryMethod * pTrajectoryMethod = NULL; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp: In member function ‘virtual void CTimeSensLsodaMethod::start()’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:565:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 565 | for (i = mSystemSize + 1; i < mData.dim; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:153:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 153 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp: In member function ‘void CHybridMethod::calculateDerivative(CVectorCore&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:330:11: warning: unused variable ‘bal’ [-Wunused-variable] 330 | C_INT32 bal = 0; | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CHybridMethodODE45::CHybridMethodODE45(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:141:1: warning: when initialized here [-Wreorder] 141 | CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45 & src, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp: In member function ‘virtual void CHybridNextReactionRKMethod::integrateDeterministicPart(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:93:22: warning: unused variable ‘react’ [-Wunused-variable] 93 | CHybridStochFlag * react = NULL; | ^~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRootFinder.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:28:1: warning: when initialized here [-Wreorder] 28 | CLsodaMethod2::CLsodaMethod2(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:61:1: warning: when initialized here [-Wreorder] 61 | CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2 & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp: In member function ‘virtual CTrajectoryMethod::Status CLsodaMethod2::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:150:13: warning: unused variable ‘StartTime’ [-Wunused-variable] 150 | C_FLOAT64 StartTime = mTime; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::doOneStep()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:431:10: warning: unused variable ‘s’ [-Wunused-variable] 431 | size_t s = mStage - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::setInitialStepSize()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:710:13: warning: unused variable ‘absT’ [-Wunused-variable] 710 | C_FLOAT64 absT = fabs(mTLeft); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::checkRoots()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:802:15: warning: unused variable ‘pLeftRoots’ [-Wunused-variable] 802 | C_FLOAT64 * pLeftRoots = mRootValuesLeft; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:805:15: warning: unused variable ‘pRightRoots’ [-Wunused-variable] 805 | C_FLOAT64 * pRightRoots = mRootValueRight; | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp: In member function ‘bool CTauLeapMethod::updateSystem()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:365:21: warning: unused variable ‘pKEnd’ [-Wunused-variable] 365 | const C_FLOAT64 * pKEnd = pK + mNumReactions; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:70:1: warning: when initialized here [-Wreorder] 70 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp: In member function ‘virtual bool CTimeSeries::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:181:14: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 181 | switch (pObject->getSimulationType()) | ^ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:48:1: warning: when initialized here [-Wreorder] 48 | CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:71:1: warning: when initialized here [-Wreorder] 71 | CTrajectoryProblem::CTrajectoryProblem(const CDataContainer * pParent): | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:94:1: warning: when initialized here [-Wreorder] 94 | CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem & src, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:193:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 193 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/locale:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:611:104: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 611 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp: In member function ‘int CCSPMethod::isBlockDiagonal(int, int, const CMatrix&, const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:15: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:21: warning: variable ‘jmax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:27: warning: variable ‘imaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:34: warning: variable ‘jmaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘virtual void CILDMMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:108:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 108 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:223:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 223 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘void CILDMMethod::deuflhard(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:886:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 886 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:1029:13: warning: variable ‘max1’ set but not used [-Wunused-but-set-variable] 1029 | C_FLOAT64 max1; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘virtual void CILDMModifiedMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:117:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 117 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:179:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 179 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:224:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 224 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::deuflhard_metab(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:508:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 508 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_new(int*, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:620:25: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 620 | C_INT nrhs, ok, fast, flag_newton; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_for_timestep(int, double&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:848:27: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 848 | C_INT i, iter, itermax, flag_newton; | ^~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_mod_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:407:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 407 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:465:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 465 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space_thomas(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:523:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 523 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::sylvester(int, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:1645:9: warning: variable ‘flag_sylvester’ set but not used [-Wunused-but-set-variable] 1645 | C_INT flag_sylvester; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:259:88: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 259 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator==(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:322:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 322 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator!=(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 362 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::allocateData(const Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:416:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 416 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::deleteData()’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:466:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 466 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::assignData(const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:510:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 510 | switch (rhs.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:626:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 626 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::istream& operator>>(std::istream&, CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:707:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 707 | switch (i.mType) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoObjectInterface.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoStack.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_yacc.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘void CUndoData::CChangeSet::add(const CUndoData::ChangeInfo&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:67:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 67 | switch (Info.type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CUndoObjectInterface*, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:207:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 207 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CData&, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:252:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 252 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:320:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 320 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:354:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 354 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::isSetProperty(const std::string&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 422 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::apply(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:555:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 555 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::undo(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:577:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 577 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectDisplayName() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:649:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 649 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:666:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 666 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectType() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:696:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 696 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::operator<(const CUndoData&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:715:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 715 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:753:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 753 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘const CData& CUndoData::getData(const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:977:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 977 | switch (mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_lex.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBaseUnit.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBrent.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiException.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual CData CCopasiParameter::toData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:105:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 105 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual void CCopasiParameter::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:185:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 185 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCopasiParameter&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:419:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 419 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::createValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:534:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 534 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::assignValidValues(const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:596:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 596 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValue(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:661:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 661 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::assignValue(const Type&, void*&, const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:713:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 713 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValidValues(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:807:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 807 | switch (type) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp: In member function ‘virtual void CCopasiParameterGroup::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp:236:22: warning: unused variable ‘pParameter’ [-Wunused-variable] 236 | CCopasiParameter * pParameter; | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h: In constructor ‘CCopasiTask::CCopasiTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:522:24: warning: ‘CCopasiTask::mInitialState’ will be initialized after [-Wreorder] 522 | CVector< C_FLOAT64 > mInitialState; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:516:20: warning: ‘CMathContainer* CCopasiTask::mpContainer’ [-Wreorder] 516 | CMathContainer * mpContainer; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:232:1: warning: when initialized here [-Wreorder] 232 | CCopasiTask::CCopasiTask() | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp: In member function ‘virtual void CCopasiTask::separate(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:654:12: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 654 | switch (activity) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTaskStatus.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDependencyGraph.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDirEntry.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CIndexedPriorityQueue.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLeastSquareSolution.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp: In static member function ‘static std::string CExpressionGenerator::generate(Operation, const std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for (int i = 1; i < objects.size(); ++i) | ~~^~~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CFlags.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.h:83, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.h:13, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h: In instantiation of ‘std::vector CEnumAnnotation::annotations() const [with Type = std::__cxx11::basic_string; Enum = CExpressionGenerator::Operation]’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:71:36: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: 71 | return OperationNames.annotations(); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: warning: loop variable ‘a’ of type ‘const std::pair, CExpressionGenerator::Operation>&’ binds to a temporary constructed from type ‘const std::pair, CExpressionGenerator::Operation>’ [-Wrange-loop-construct] 114 | for (const std::pair< Type, Enum > & a : mMap) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: note: use non-reference type ‘const std::pair, CExpressionGenerator::Operation>’ to make the copy explicit or ‘const std::pair, CExpressionGenerator::Operation>&’ to prevent copying [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::create(const CTaskEnum::Task&, const CTaskEnum::Method&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 80 | switch (methodType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::copy(const CCopasiMethod*, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 288 | switch (pSrc->getSubType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:193:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 193 | for (size_t i = 0; i < taskList.size(); i++) /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CReadConfig.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp: In static member function ‘static FittingItem* ResultParser::parseItem(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:481:16: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 481 | if (firstLeq == -1) | ~~~~~~~~~^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:488:14: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 488 | if (square == -1) | ~~~~~~~^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTableCell.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskEnum.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitComponent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp: In member function ‘virtual bool CUnitDefinitionDB::add(const CUnitDefinition&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:43:21: warning: variable ‘pCopy’ set but not used [-Wunused-but-set-variable] 43 | CUnitDefinition * pCopy = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h: In constructor ‘CUnitParserBase::CUnitParserBase()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:81:20: warning: ‘CUnitParserBase::mPosition’ will be initialized after [-Wreorder] 81 | unsigned C_INT32 mPosition; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:80:10: warning: ‘CUnit* CUnitParserBase::mpUnit’ [-Wreorder] 80 | CUnit *mpUnit; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CUnitParserBase::CUnitParserBase(): | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CVersion.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::add(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:277:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 277 | switch (issue.getSeverity()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::remove(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:316:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 316 | switch (issue.getSeverity()) | ^ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CluX.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/Cmd5.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CopasiTime.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/dgemm.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CExpat.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp: In function ‘ISODateTime[abi:cxx11](tm*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:24: warning: ‘%.02d’ directive writing between 2 and 11 bytes into a region of size between 8 and 18 [-Wformat-overflow=] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:20: note: directive argument in the range [-2147483647, 2147483647] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:28: In function ‘sprintf’, inlined from ‘ISODateTime[abi:cxx11](tm*)’ at /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:14: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 17 and 72 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:69: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:304:7: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 304 | pdelete(mpTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp: In member function ‘bool CCopasiXML::saveModel()’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:1042:28: warning: unused variable ‘pDataModel’ [-Wunused-variable] 1042 | CDataModel * pDataModel = Assignments.getObjectDataModel(); | ^~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/BoundingBoxHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:79:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 79 | mpData->pTaskList->clear(); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:181:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 181 | mpData->pFunctionList->getIndex("Objective Function") != C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp: In member function ‘CXMLHandler* CXMLHandlerFactory::createHandler(const CXMLHandler::Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘AFTER’ not handled in switch [-Wswitch] 137 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint1’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Body’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘CurveSegment’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘DelayExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘End’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Expression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Footer’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Header’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘InitialExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘NoiseExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Position’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘PriorityExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Problem’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Start’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Text’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘TriggerExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Unit’ not handled in switch [-Wswitch] [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CallParameterHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ChannelSpecHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CharacterDataHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CommentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CubicBezierHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CurveHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/DimensionsHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GUIHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:96:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 96 | Index = mpData->pFunctionList->getIndex(Name); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ImageHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/InitialStateHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineSegmentHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfLayoutsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MathMLHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MethodHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MiriamAnnotationHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterTextHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotItemHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PointHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveElementHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportSectionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportTargetHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SliderHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateVariableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TableHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UNKNOWNHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:66:52: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 66 | mpData->pCurrentTask = CTaskFactory::create(Type, mpData->pTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnsupportedAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:410:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 410 | CScanTask* pTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Scan")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createScanTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:450:8: warning: unused variable ‘result’ [-Wunused-variable] 450 | bool result = exportNthScanItem(pProblem, numItems - 1, task); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createSteadyStateTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:638:23: warning: unused variable ‘tProblem’ [-Wunused-variable] 638 | CTrajectoryProblem* tProblem = static_cast(pTask->getProblem()); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In static member function ‘static std::string CSEDMLExporter::getParameterValueAsString(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:49: warning: second operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:58: warning: third operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:68: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static const CDataObject* SEDMLUtils::resolveVariable(CModel*, const SedVariable*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:337:25: warning: unused variable ‘pReaction’ [-Wunused-variable] 337 | const CReaction * pReaction = dynamic_cast< const CReaction * >(obj); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:168:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 168 | if (pTaskList->getIndex("Time-Course") == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static int SEDMLUtils::getAlphaFromRgba(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:665:7: warning: unused variable ‘offset’ [-Wunused-variable] 665 | int offset = rgba[0] == '#' ? 1 : 0; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp: In member function ‘void SEDMLImporter::importOutputs()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:465:18: warning: unused variable ‘logX’ [-Wunused-variable] 465 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:466:18: warning: unused variable ‘logY’ [-Wunused-variable] 466 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:499:18: warning: unused variable ‘logX’ [-Wunused-variable] 499 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:500:18: warning: unused variable ‘logY’ [-Wunused-variable] 500 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:424:46: warning: unused variable ‘copasiMap’ [-Wunused-variable] 424 | std::map< const CDataObject *, SBase * > & copasiMap = pModel->getObjectDataModel()->getCopasi2SBMLMap(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:426:29: warning: unused variable ‘pReports’ [-Wunused-variable] 426 | CReportDefinitionVector * pReports = mpDataModel->getReportDefinitionList(); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h: In constructor ‘VariableInfo::VariableInfo(const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:74:23: warning: ‘VariableInfo::mpObject’ will be initialized after [-Wreorder] 74 | const CDataObject * mpObject; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:72:8: warning: ‘bool VariableInfo::mIsValid’ [-Wreorder] 72 | bool mIsValid; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:808:1: warning: when initialized here [-Wreorder] 808 | VariableInfo::VariableInfo(const CDataObject * pObject) | ^~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-core /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-static.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make 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/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/python.i /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Generating wizard/ui_wizard.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/ui_wizard.h /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.ui [ 36%] Building CXX object copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o [ 36%] Building CXX object copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -MF CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o.d -o CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -MF CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o.d -o CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp [ 36%] Generating MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQCreatorDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeViewItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating MIRIAMUI/moc_CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp_parameters [ 37%] Generating MIRIAMUI/ui_CQMiriamWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQMiriamWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.ui [ 37%] Generating MIRIAMUI/ui_CQRDFTreeView.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQRDFTreeView.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.ui [ 37%] Generating UI/moc_AboutDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp_parameters [ 37%] Generating UI/moc_CColorScale.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating UI/moc_CCopasiPlot2YSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiPlotSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CProgressBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp_parameters [ 38%] Generating UI/moc_CQAnalyticsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidgetDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp_parameters [ 38%] Generating UI/moc_CQBaseDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBaseTreeDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPane.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPaneDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp_parameters [ 38%] Generating UI/moc_CQCheckModelWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp_parameters [ 38%] Generating UI/moc_CQComboDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp_parameters [ 38%] Generating UI/moc_CQCompartment.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentCopyOptions.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp_parameters [ 39%] Generating UI/moc_CQCopasiApplication.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp_parameters [ 39%] Generating UI/moc_CQCrossSectionTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp_parameters [ 39%] Generating UI/moc_CQDateTimeEditDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp_parameters [ 39%] Generating UI/moc_CQDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp_parameters [ 39%] Generating UI/moc_CQDependencyDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp_parameters [ 39%] Generating UI/moc_CQDependencyWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp_parameters [ 39%] Generating UI/moc_CQDifferentialEquations.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp_parameters [ 39%] Generating UI/moc_CQEFMListWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 39%] Generating UI/moc_CQEFMNetReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 39%] Generating UI/moc_CQEFMReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 39%] Generating UI/moc_CQEFMSpeciesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 39%] Generating UI/moc_CQEFMWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 39%] Generating UI/moc_CQEventDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:337: Warning 383: operator++ ignored /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ [ 40%] Generating UI/moc_CQEventWidget1.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 40%] Generating UI/moc_CQEventsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:25: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 525 | size_t imax = TaskList.size(); /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 40%] Generating UI/moc_CQExpandModelData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘int runScheduledTasks(CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:10: warning: unused variable ‘imax’ [-Wunused-variable] 525 | size_t imax = TaskList.size(); | ^~~~ [ 40%] Generating UI/moc_CQExperimentData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentSelection.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp_parameters [ 40%] Generating UI/moc_CQExpressionMmlStackedWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpressionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFittingItemWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFittingResultTab1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 40%] Generating UI/moc_CQFittingWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFluxModeDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 40%] Generating UI/moc_CQFunctionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp_parameters [ 41%] Generating UI/moc_CQFunctionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantityDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp_parameters [ 41%] Generating UI/moc_CQLNAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp_parameters [ 41%] Generating UI/moc_CQMCAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp_parameters [ 41%] Generating UI/moc_CQMathMatrixWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp_parameters [ 41%] Generating UI/moc_CQMatrixDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp_parameters [ 41%] Generating UI/moc_CQMergingData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp_parameters [ 41%] Generating UI/moc_CQMessageBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp_parameters [ 41%] Generating UI/moc_CQMmlScrollView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp_parameters [ 42%] Generating UI/moc_CQModelValue.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 42%] Generating UI/moc_CQModelWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQMultipleSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNameSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNotes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp_parameters [ 42%] Generating UI/moc_CQOptPopulation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp_parameters [ 42%] Generating UI/moc_CQOscillationTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQParameterEstimationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp_parameters [ 42%] Generating UI/moc_CQParameterGroupDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterGroupView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp_parameters [ 43%] Generating UI/moc_CQParameterResultItemModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.h:0: Note: No relevant classes found. No output generated. [ 43%] Generating UI/moc_CQParameterSetsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterSetsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPlotDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp_parameters [ 43%] Generating UI/moc_CQPlotsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPreferenceDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemText.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp_parameters [ 44%] Generating UI/moc_CQPushButtonDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp_parameters [ 44%] Generating UI/moc_CQReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp_parameters [ 44%] Generating UI/moc_CQReactionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘exportSBML()’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:827:27: warning: ‘SBMLSchema’ may be used uninitialized [-Wmaybe-uninitialized] 827 | copasi::SBMLSchema_enum SBMLSchema; | ^~~~~~~~~~ [ 44%] Generating UI/moc_CQReportDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinition.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinitionSelect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp_parameters [ 44%] Generating UI/moc_CQReportListItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQReportsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp_parameters [ 44%] Generating UI/moc_CQSBMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLImportDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp_parameters [ 44%] Generating UI/moc_CQScanWidgetParameterSet.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp_parameters [ 44%] Generating UI/moc_CQScrolledDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp_parameters [ 44%] Generating UI/moc_CQSensResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQSimpleSelectionTree.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp_parameters [ 45%] Generating UI/moc_CQSortFilterProxyModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.h:0: Note: No relevant classes found. No output generated. [ 45%] Generating UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp_parameters [ 45%] Generating UI/moc_CQSpinBoxDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp_parameters [ 45%] Generating UI/moc_CQSplashWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp_parameters [ 45%] Generating UI/moc_CQStartValueReset.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp_parameters [ 45%] Generating UI/moc_CQSteadyStateResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultSubWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSATimeScaleWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp_parameters [ 46%] Generating UI/moc_CQTabWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp_parameters [ 46%] Generating UI/moc_CQTableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp_parameters [ 46%] Generating UI/moc_CQTableWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.h:0: Note: No relevant classes found. No output generated. [ 46%] Generating UI/moc_CQTaskBtnWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskHeaderWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskMethodWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CFunction const * >' undefined. ../swig/CVector.i:137: Warning 401: 'CVectorCore< CFunction const * >' must be defined before it is used as a base class. /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CObjectInterface const * >' undefined. ../swig/CVector.i:139: Warning 401: 'CVectorCore< CObjectInterface const * >' must be defined before it is used as a base class. [ 46%] Generating UI/moc_CQTaskThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp_parameters [ 46%] Generating UI/moc_CQTextDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp_parameters [ 46%] Generating UI/moc_CQThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp_parameters [ 46%] Generating UI/moc_CQTimeSensWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp_parameters [ 46%] Generating UI/moc_CQTrajectoryWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp_parameters [ 46%] Generating UI/moc_CQUndoTester.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:59: Warning 401: Nothing known about base class 'SBMLUnitSupport'. Ignored. [ 47%] Generating UI/moc_CQUnitDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp_parameters [ 47%] Generating UI/moc_CQUnitDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp_parameters [ 47%] Generating UI/moc_CQUnitsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp_parameters [ 47%] Generating UI/moc_CQUpdateAvogadro.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp_parameters [ 47%] Generating UI/moc_CQUpdatesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp_parameters [ 47%] Generating UI/moc_CQValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CQValidatorUnit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp_parameters [ 47%] Generating UI/moc_CScanContainerWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp_parameters [ 47%] Generating UI/moc_CScanItemData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CScanWidgetRandom.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetRepeat.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetScan.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetTask.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp_parameters [ 48%] Generating UI/moc_CUpDownSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp_parameters [ 48%] Generating UI/moc_CWindowInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp_parameters [ 48%] Linking CXX executable CopasiSE cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSE.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -o CopasiSE ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so [ 48%] Generating UI/moc_ChemEqValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiGuiTypes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiSlider.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp_parameters [ 48%] Generating UI/moc_DataModelGUI.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp_parameters [ 48%] Generating UI/moc_DefaultplotDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp_parameters [ 48%] Generating UI/moc_FunctionWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp_parameters [ 48%] Generating UI/moc_MyLineEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_ObjectBrowserWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp_parameters [ 49%] Generating UI/moc_ReactionsWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp_parameters [ 49%] Generating UI/moc_ScanWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp_parameters [ 49%] Generating UI/moc_SensWidgetComboBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp_parameters [ 49%] Generating UI/moc_SensitivitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp_parameters [ 49%] Generating UI/moc_SliderDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp_parameters [ 49%] Generating UI/moc_SliderSettingsDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp_parameters [ 49%] Generating UI/moc_StateSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp_parameters [ 49%] Generating UI/moc_SteadyStateWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp_parameters [ 49%] Linking CXX executable CopasiSBW cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSBW.dir/link.txt --verbose=1 [ 49%] Generating UI/moc_TaskWidget.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -rdynamic CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -o CopasiSBW ../libCOPASISE.a //usr/lib64/libSBW.so -lpthread -lz /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas -lz cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp_parameters [ 49%] Generating UI/moc_copasiWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp_parameters [ 49%] Generating UI/moc_copasiui3window.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp_parameters [ 49%] Generating UI/moc_listviews.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp_parameters [ 49%] Generating UI/moc_objectdebug.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp_parameters [ 49%] Generating UI/moc_parametertable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp_parameters [ 50%] Generating UI/moc_qtUtilities.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:0: Note: No relevant classes found. No output generated. [ 50%] Generating UI/ui_CEntityProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CEntityProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CEntityProvenanceDialog.ui [ 50%] Generating UI/ui_CLNAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.ui [ 50%] Generating UI/ui_CMCAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.ui [ 50%] Generating UI/ui_CProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProvenanceDialog.ui [ 50%] Generating UI/ui_CQAnalyticsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQAnalyticsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.ui [ 50%] Generating UI/ui_CQArrayAnnotationsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQArrayAnnotationsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.ui [ 50%] Generating UI/ui_CQBrowserPane.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQBrowserPane.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.ui [ 50%] Generating UI/ui_CQCheckModelWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCheckModelWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.ui [ 50%] Generating UI/ui_CQCompartment.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.ui [ 50%] Generating UI/ui_CQCompartmentCopyOptions.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentCopyOptions.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.ui [ 51%] Generating UI/ui_CQCompartmentsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.ui [ 51%] Generating UI/ui_CQCrossSectionTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCrossSectionTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.ui [ 51%] Generating UI/ui_CQDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.ui [ 51%] Generating UI/ui_CQDependencyDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.ui [ 51%] Generating UI/ui_CQDependencyWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.ui [ 51%] Generating UI/ui_CQDifferentialEquations.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDifferentialEquations.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.ui [ 51%] Generating UI/ui_CQEFMListWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMListWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.ui [ 51%] Generating UI/ui_CQEFMResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.ui [ 51%] Generating UI/ui_CQEFMWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.ui [ 51%] Generating UI/ui_CQEventWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.ui [ 51%] Generating UI/ui_CQEventsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.ui [ 51%] Generating UI/ui_CQExpandModelData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpandModelData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.ui [ 51%] Generating UI/ui_CQExperimentData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.ui [ 51%] Generating UI/ui_CQExperimentSelection.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentSelection.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.ui [ 52%] Generating UI/ui_CQExpressionMmlStackedWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.ui [ 52%] Generating UI/ui_CQFittingItemWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingItemWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.ui [ 52%] Generating UI/ui_CQFittingResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.ui [ 52%] Generating UI/ui_CQFittingResultTab1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResultTab1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.ui [ 52%] Generating UI/ui_CQFittingWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.ui [ 52%] Generating UI/ui_CQFunctionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFunctionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.ui [ 52%] Generating UI/ui_CQGlobalQuantitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQGlobalQuantitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.ui [ 52%] Generating UI/ui_CQLNAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLNAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.ui [ 52%] Generating UI/ui_CQLayoutsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLayoutsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.ui /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: Overloaded method CDataValue::CDataValue(int const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: as it is shadowed by CDataValue::CDataValue(CDataValue::Type const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: Overloaded method CDataValue::CDataValue(CDataValue::Type const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: as it is shadowed by CDataValue::CDataValue(int const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &). [ 52%] Generating UI/ui_CQLyapResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.ui [ 52%] Generating UI/ui_CQLyapWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.ui [ 52%] Generating UI/ui_CQMCAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMCAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.ui [ 52%] Generating UI/ui_CQMathMatrixWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.ui [ 53%] Generating UI/ui_CQMatrixDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMatrixDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.ui [ 53%] Generating UI/ui_CQMergingData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMergingData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.ui [ 53%] Generating UI/ui_CQMessageBox.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMessageBox.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.ui [ 53%] Generating UI/ui_CQModelValue.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.ui [ 53%] Generating UI/ui_CQModelWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.ui [ 53%] Generating UI/ui_CQMoietiesTaskResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.ui [ 53%] Generating UI/ui_CQMoietiesTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.ui [ 53%] Generating UI/ui_CQMultipleSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMultipleSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.ui [ 53%] Generating UI/ui_CQNameSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNameSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.ui [ 53%] Generating UI/ui_CQNotes.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNotes.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.ui [ 53%] Generating UI/ui_CQOptimizationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.ui [ 53%] Generating UI/ui_CQOptimizationWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.ui [ 53%] Generating UI/ui_CQOscillationTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOscillationTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.ui [ 54%] Generating UI/ui_CQParameterEstimationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterEstimationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.ui [ 54%] Generating UI/ui_CQParameterOverviewWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterOverviewWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.ui [ 54%] Generating UI/ui_CQParameterSetWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetWidget.ui [ 54%] Generating UI/ui_CQParameterSetsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.ui [ 54%] Generating UI/ui_CQParametersWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParametersWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParametersWidget.ui [ 54%] Generating UI/ui_CQPlotsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPlotsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.ui [ 54%] Generating UI/ui_CQPreferenceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPreferenceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.ui [ 54%] Generating UI/ui_CQProgressDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.ui /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject * >::operator ()(size_t const &). [ 54%] Generating UI/ui_CQProgressItem.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItem.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.ui /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject const * >::operator ()(size_t const &). [ 54%] Generating UI/ui_CQProgressItemBar.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemBar.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.ui [ 54%] Generating UI/ui_CQProgressItemText.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemText.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.ui /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CFunction const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CFunction const * >::operator ()(size_t const &). [ 54%] Generating UI/ui_CQReactionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReactionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.ui /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CObjectInterface const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CObjectInterface const * >::operator ()(size_t const &). [ 54%] Generating UI/ui_CQReportDefinition.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinition.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.ui [ 54%] Generating UI/ui_CQReportDefinitionSelect.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinitionSelect.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.ui ../swig/CCopasiMessage.i:55: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:259: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t,...). ../swig/CCopasiMessage.i:43: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...). /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...) effectively ignored, ../swig/CCopasiMessage.i:43: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *). [ 55%] Generating UI/ui_CQReportsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.ui [ 55%] Generating UI/ui_CQSEDMLImportDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.ui [ 55%] Generating UI/ui_CQScanWidgetParameterSet.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScanWidgetParameterSet.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.ui [ 55%] Generating UI/ui_CQScrolledDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScrolledDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.ui [ 55%] Generating UI/ui_CQSensResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.ui [ 55%] Generating UI/ui_CQSpeciesDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.ui [ 55%] Generating UI/ui_CQSpeciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.ui [ 55%] Generating UI/ui_CQSplashWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSplashWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.ui [ 55%] Generating UI/ui_CQStartValueReset.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQStartValueReset.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.ui [ 55%] Generating UI/ui_CQSteadyStateResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.ui [ 55%] Generating UI/ui_CQTSSAResultSubWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.ui [ 55%] Generating UI/ui_CQTSSAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.ui [ 55%] Generating UI/ui_CQTabWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTabWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.ui [ 56%] Generating UI/ui_CQTaskBtnWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskBtnWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.ui [ 56%] Generating UI/ui_CQTaskHeaderWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskHeaderWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.ui [ 56%] Generating UI/ui_CQTaskMethodWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskMethodWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.ui [ 56%] Generating UI/ui_CQTextDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTextDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.ui [ 56%] Generating UI/ui_CQTimeSensWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSensWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.ui [ 56%] Generating UI/ui_CQTimeSeriesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSeriesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.ui [ 56%] Generating UI/ui_CQTrajectoryWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTrajectoryWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.ui [ 56%] Generating UI/ui_CQUndoHistoryDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUndoHistoryDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoHistoryDialog.ui [ 56%] Generating UI/ui_CQUnitDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.ui [ 56%] Generating UI/ui_CQUnitsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.ui [ 56%] Generating UI/ui_CQUpdateAvogadro.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUpdateAvogadro.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.ui [ 56%] Generating UI/ui_CScanWidgetRandom.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRandom.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.ui [ 56%] Generating UI/ui_CScanWidgetRepeat.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRepeat.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.ui [ 56%] Generating UI/ui_CScanWidgetScan.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetScan.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.ui [ 57%] Generating UI/ui_CScanWidgetTask.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetTask.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.ui [ 57%] Generating UI/ui_CUpDownSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CUpDownSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.ui [ 57%] Generating UI/ui_DefaultplotDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_DefaultplotDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.ui [ 57%] Generating UI/ui_FunctionWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.ui [ 57%] Generating UI/ui_ReactionsWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.ui [ 57%] Generating UI/ui_SensitivitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SensitivitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.ui [ 57%] Generating UI/ui_SliderDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.ui [ 57%] Generating UI/ui_SliderSettingsDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderSettingsDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.ui [ 57%] Generating UI/ui_StateSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.ui [ 57%] Generating UI/ui_SteadyStateWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SteadyStateWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.ui [ 57%] Generating UI/ui_objectdebug.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_objectdebug.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.ui [ 57%] Generating barChart/moc_CQ3DBarsModifier.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/barChart && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp_parameters [ 57%] Generating layoutUI/moc_BezierCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CArrow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CCompartmentGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CDataEntity.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CLabel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CQAutolayoutWizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp_parameters [ 58%] Generating layoutUI/moc_CQCurrentValueTable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp_parameters [ 58%] Generating layoutUI/moc_CQLayoutThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp_parameters [ 58%] Generating layoutUI/moc_CQPlayerControlWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp_parameters [ 58%] Generating layoutUI/moc_CQSpringLayoutParameterWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp_parameters [ 58%] Generating layoutUI/moc_CSimSummaryInfo.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CVisParameters.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_BandedGraphWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp_parameters [ 58%] Generating plotUI/moc_C2DCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_C2DPlotCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CBandedGraphData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CHistoCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CLinearColorMap.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_COutputHandlerPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotSpectogram.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CQAdvancedPlotSettings.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp_parameters [ 58%] Generating plotUI/moc_CQCustomPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp_parameters [ 58%] Generating plotUI/moc_CQDataVizPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp_parameters [ 59%] Generating plotUI/moc_CQExtender.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp_parameters [ 59%] Generating plotUI/moc_CQMarchingSquares.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotColors.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotEditWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp_parameters [ 59%] Generating plotUI/moc_CQSpectogramWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp_parameters [ 59%] Generating plotUI/moc_CQtChartsPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQwtPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp_parameters [ 59%] Generating plotUI/moc_CSpectorgramData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_HistoWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp_parameters [ 59%] Generating plotUI/moc_curve2dwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp_parameters [ 59%] Generating plotUI/moc_plotwindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp_parameters [ 59%] Generating plotUI/moc_scrollbar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp_parameters [ 59%] Generating plotUI/moc_scrollzoomer.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp_parameters [ 59%] Generating plotUI/ui_BandedGraphWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_BandedGraphWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.ui [ 59%] Generating plotUI/ui_CQAdvancedPlotSettings.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQAdvancedPlotSettings.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.ui [ 59%] Generating plotUI/ui_CQPlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQPlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.ui [ 59%] Generating plotUI/ui_CQSpectogramWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQSpectogramWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.ui [ 60%] Generating plotUI/ui_HistoWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_HistoWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.ui [ 60%] Generating plotUI/ui_PlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_PlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/PlotSubwidget.ui [ 60%] Generating plotUI/ui_curve2dwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_curve2dwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.ui [ 60%] Generating qlayout/moc_CQAnimationControls.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationSettingsEditor.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp_parameters [ 60%] Generating qlayout/moc_CQConnectionGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQCopasiEffect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescription.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescriptionEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp_parameters [ 60%] Generating qlayout/moc_CQElementProperties.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp_parameters [ 61%] Generating qlayout/moc_CQLabelGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutScene.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp_parameters [ 61%] Generating qlayout/moc_CQRenderConverter.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQRoundedRect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQStyledGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQZoomableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp_parameters [ 61%] Generating qlayout/ui_CQAnimationControls.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationControls.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.ui [ 62%] Generating qlayout/ui_CQAnimationSettingsEditor.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationSettingsEditor.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.ui [ 62%] Generating qlayout/ui_CQAnimationWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.ui [ 62%] Generating qlayout/ui_CQEffectDescriptionEdit.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQEffectDescriptionEdit.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.ui [ 62%] Generating qlayout/ui_CQElementProperties.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQElementProperties.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.ui [ 62%] Generating qrc_copasi.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/rcc --name copasi --output /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/copasi.qrc [ 62%] Generating resourcesUI/moc_CQIconResource.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CMathMLToTeX.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CStructureParser.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating undoUI/moc_CQUndoDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp_parameters [ 63%] Generating undoUI/moc_CQUndoDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDialog.cpp_parameters [ 63%] Generating undoUI/ui_CQUndoDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/ui_CQUndoDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.ui [ 63%] Generating wizard/moc_wizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/wizard && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp_parameters cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASIUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQCreatorDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../common/patch-wrapper.cmake -- Patching C++ wrapper cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DVERSION=4.42.284 -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/patch-python.cmake -- Patching Python wrapper cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -Dbinding_python_lib_EXPORTS -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/usr/include/python3.12 -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -MF CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o.d -o CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4335: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:46, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:241:54: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 241 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CDataModel]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CDataModel; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:245:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 245 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:265:59: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 265 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvaluationTree]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvaluationTree; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘CDataObject* CVector_Sl_CDataObject_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6902:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6902 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CDataObject* CVector_Sl_CDataObject_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6916:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6916 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CFunction* CVector_Sl_CFunction_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6924:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6924 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CObjectInterface* CVector_Sl_CObjectInterface_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6938 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10692:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: 10692 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10769:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 10769 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotItem]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotItem; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘std::vector CDataHandler_getNthRow(CDataHandler*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14243:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14243 | if (index >= data.size()) | ~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15414: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQModifiedDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15467:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 15467 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15517: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SBMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:198627:3: warning: deleting object of polymorphic class type ‘SBMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 198627 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_CSBMLExporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:199481:3: warning: deleting object of polymorphic class type ‘CSBMLExporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 199481 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SEDMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:200350:3: warning: deleting object of polymorphic class type ‘SEDMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 200350 | delete arg1; | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQReferenceDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/CQ3DBarsModifier.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp: In member function ‘void CQSelectionWizardPage::fillTree(const CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:46: warning: enum constant in boolean context [-Wint-in-bool-context] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:66: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:54: warning: enum constant in boolean context [-Wint-in-bool-context] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:74: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQPlayerControlWidget.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:128:88: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 128 | const CEFMTask *task = dynamic_cast< const CEFMTask * >(&mpDataModel->getTaskList()->operator[]("Elementary Flux Modes")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp: In member function ‘virtual void QCustomTimeCourseAnimation::getScales(std::vector&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:348:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 348 | if (index == C_INVALID_INDEX) [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiEffect.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184830:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13961:14: note: ‘success’ was declared here 13961 | bool success; | ^~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184792:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13941:14: note: ‘success’ was declared here 13941 | bool success; | ^~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQZoomableView.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_processRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184890:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_processRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14005:14: note: ‘success’ was declared here 14005 | bool success; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.cpp In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual bool CQCustomPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:549:8: warning: variable ‘needLeft’ set but not used [-Wunused-but-set-variable] 549 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual void CQCustomPlot::wheelEvent(QWheelEvent*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1535:50: warning: ‘QPoint QWheelEvent::pos() const’ is deprecated: Use position() [-Wdeprecated-declarations] 1535 | QCPLayerable * element = layerableAt(event->pos(), true); | ~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QPaintEvent:1, from /usr/include/qcustomplot.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:24: /usr/include/qt5/QtGui/qevent.h:225:19: note: declared here 225 | inline QPoint pos() const { return p.toPoint(); } | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1632:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 1632 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1755:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1755 | if (current_count != data_size && pY2) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1759:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1759 | for (int i = current_count; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1784:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1784 | if (current_count != data_size && helper) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1802:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1802 | if (data_size != current_count) | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1815:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1815 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1853:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1853 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1894:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1894 | for (int l = 0; l < contours.size(); l++) | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1897:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1897 | for (int j = 0; j < contours[l].size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::resizeCurveData(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1978:48: warning: unused variable ‘data’ [-Wunused-variable] 1978 | std::vector< CVector< double > * > & data = mData[activity]; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::initializeIndependentData(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2179:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2179 | for (int c = 0; c < numCols; ++c) | ~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2170:14: warning: unused variable ‘independentObjects’ [-Wunused-variable] 2170 | auto & independentObjects = pExperiment->getIndependentObjects(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateSteadyStateInfo(int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2203:9: warning: unused variable ‘model’ [-Wunused-variable] 2203 | auto& model = *CRootContainer::getDatamodelList()->begin(); | ^~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:47:1: warning: when initialized here [-Wreorder] 47 | CQDataVizPlot::CQDataVizPlot(QWidget * parent) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(const CPlotSpecification*, QWidget*, PlotMode)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:72:1: warning: when initialized here [-Wreorder] 72 | CQDataVizPlot::CQDataVizPlot(const CPlotSpecification * plotspec, QWidget * parent, PlotMode mode) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:267:8: warning: unused variable ‘needLeft’ [-Wunused-variable] 267 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:268:8: warning: unused variable ‘needRight’ [-Wunused-variable] 268 | bool needRight = false; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:372:12: warning: unused variable ‘isSpectogram’ [-Wunused-variable] 372 | bool isSpectogram = pItem->getType() == CPlotItem::spectogram; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In function ‘std::set resizeRange(std::set&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:581:20: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 581 | if (range.size() < maxRange) | ~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘void CQDataVizPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:634:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 634 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:656:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 656 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:704:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 704 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:710:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 710 | for (auto i = 0; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:641:12: warning: unused variable ‘curve_type’ [-Wunused-variable] 641 | auto curve_type = (*itCurves)->property("curve_type").toInt(); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: unused variable ‘data_changed’ [-Wunused-variable] 628 | bool data_changed = false; | ^~~~~~~~~~~~ In file included from /usr/include/c++/14/utility:69, from /usr/include/qt5/QtCore/qglobal.h:47, from /usr/include/qt5/QtCore/qnamespace.h:43, from /usr/include/qt5/QtCore/qobjectdefs.h:48, from /usr/include/qt5/QtCore/qobject.h:46, from /usr/include/qt5/QtCore/QObject:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:20: /usr/include/c++/14/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:739:41: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: 739 | dataMap[std::make_pair(cur_x, cur_z)] = QVector3D(cur_x, cur_y, cur_z); /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_pair.h:929:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 929 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::saveData(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1024:26: warning: unused variable ‘scatter’ [-Wunused-variable] 1024 | QScatter3DSeries * scatter = qobject_cast< QScatter3DSeries * >(curve.second); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1019:8: warning: unused variable ‘FirstHistogram’ [-Wunused-variable] 1019 | bool FirstHistogram = true; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQExtender.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:76:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 76 | switch (cellSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘void CQMarchingSquares::isoSubpath(IsoCell*, int, int, levelPaths&, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:547:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 547 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:584:14: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 584 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:90:1: warning: control reaches end of non-void function [-Wreturn-type] 90 | } | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 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/usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp: In member function ‘void CQPlotSubwidget::addSpectrum()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:592:14: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 592 | size_t imax; | ^~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp: In member function ‘virtual double CSpectorgramData::value(double, double) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:342:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 342 | if (xpos == mSizeX) --xpos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:344:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 344 | if (ypos == mSizeY) --ypos; | ~~~~~^~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp: In member function ‘HistoWidget::buttonPressedX()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:90:66: warning: ‘nonnull’ argument ‘this’ compared to NULL [-Wnonnull-compare] 90 | while (!(pParent = dynamic_cast< CQPlotSubwidget * >(tmp)) && this) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollbar.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 68%] Built target CopasiSE [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollzoomer.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:183:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 183 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:187:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 187 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mtableNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:210:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 210 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:214:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 214 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:69:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 69 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:337:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 337 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/AboutDialog.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Built target CopasiSBW /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:227:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 227 | dynamic_cast(& mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:57:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 57 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:298:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 298 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:69:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidgetDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/analytics/CAnalyticsTask.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseTreeDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQComboDelegate.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:16: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp: In constructor ‘CQCheckModelWindow::CQCheckModelWindow(CopasiUI3Window*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:21: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:457:91: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 457 | updateNode(findNodeFromId(ListViews::WidgetType::SteadyState), mpCopasiDM->getTaskList()->operator[]("Steady-State").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp: In member function ‘void CQBrowserPaneDM::createStaticDM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 993 | switch (pNodeInfo->node) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Compartments’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Species’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Reactions’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Events’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSets’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Plots’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplates’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp: In member function ‘virtual void CQCompartmentsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCopasiApplication.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDateTimeEditDelegate.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp: In member function ‘virtual QVariant CQEFMSpeciesDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:91:109: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 91 | mpTask->getSpeciesChanges(*(mBeginModes + index.row()), **(mBeginSpecies + index.column() - 1)); | ^ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Linking CXX shared library _COPASI.so cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -shared -Wl,-soname,_COPASI.so -o _COPASI.so CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o ../../libCOPASISE.a -lpython3.12 /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp: In member function ‘virtual void CQEventsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:250:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 250 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘void CQExperimentData::slotFileEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:628:10: warning: unused variable ‘i’ [-Wunused-variable] 628 | size_t i = mpExperimentSetCopy->getExperimentCount() - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘bool CQExperimentData::saveTable(CExperiment*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:1537:8: warning: variable ‘FoundTime’ set but not used [-Wunused-but-set-variable] 1537 | bool FoundTime = false; | ^~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h: In constructor ‘CQExpressionWidget::CQExpressionWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:273:15: warning: ‘CQExpressionWidget::mCursor’ will be initialized after [-Wreorder] 273 | QTextCursor mCursor; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:272:28: warning: ‘CQExpressionHighlighter* CQExpressionWidget::mpExpressionHighlighter’ [-Wreorder] 272 | CQExpressionHighlighter *mpExpressionHighlighter; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:218:1: warning: when initialized here [-Wreorder] 218 | CQExpressionWidget::CQExpressionWidget(QWidget * parent, const char * name) | ^~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadExperimentSetIntoTree(const CExperimentSet&, QTreeWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: variable ‘pItem’ set but not used [-Wunused-but-set-variable] 144 | QTreeWidgetItem* pItem = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:208:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: 208 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘virtual bool CQFittingResult::enterProtected()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:275:32: warning: unused variable ‘Solutions’ [-Wunused-variable] 275 | const CVector< C_FLOAT64 > & Solutions = mpProblem->getSolutionVariables(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:276:32: warning: unused variable ‘StdDeviations’ [-Wunused-variable] 276 | const CVector< C_FLOAT64 > & StdDeviations = mpProblem->getVariableStdDeviations(); | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:277:32: warning: unused variable ‘Gradients’ [-Wunused-variable] 277 | const CVector< C_FLOAT64 > & Gradients = mpProblem->getVariableGradients(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:525:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 525 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:530:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 530 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /usr/include/c++/14/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/qt5/QtCore/qbytearray.h:52, from /usr/include/qt5/QtCore/qvariant.h:44, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:25: In member function ‘std::__new_allocator::construct(COptItem**, COptItem* const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, COptItem**, COptItem* const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:531:17, inlined from ‘std::vector >::push_back(COptItem* const&)’ at /usr/include/c++/14/bits/stl_vector.h:1285:30, inlined from ‘CQFittingItemWidget::slotNew()’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1137:25: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotNew()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1119:13: note: ‘pItem’ declared here 1119 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotParamEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:452:29: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 452 | pItem->setObjectCN(Selection[i]->getCN()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:434:21: note: ‘pItem’ declared here 434 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotCopy()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:952:15: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 952 | setTableText((int) row, pItem); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:925:13: note: ‘pItem’ declared here 925 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFluxModeDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp: In member function ‘virtual bool CQFittingWidget::taskFinishedEvent()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:309:8: warning: unused variable ‘result’ [-Wunused-variable] 309 | bool result = TaskWidget::taskFinishedEvent(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp: In member function ‘virtual void CQFunctionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:243:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 243 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp: In member function ‘virtual void CQGlobalQuantitiesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:251:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:60:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 60 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:77:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 77 | mpTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Lyapunov Exponents")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart 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/usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:69:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp: In member function ‘virtual int CQMessageBox::exec()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:454:7: warning: unused variable ‘result’ [-Wunused-variable] 454 | int result = QDialog::exec(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h: In constructor ‘CQModelValue::CQModelValue(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:65:15: warning: ‘CQModelValue::mObjectCNToCopy’ will be initialized after [-Wreorder] 65 | CCommonName mObjectCNToCopy; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:57:17: warning: ‘CModelValue* CQModelValue::mpModelValue’ [-Wreorder] 57 | CModelValue * mpModelValue; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:50:1: warning: when initialized here [-Wreorder] 50 | CQModelValue::CQModelValue(QWidget* parent, const char* name) | ^~~~~~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual QValidator::State CQValidatorXML::validate(QString&, int&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:85:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 85 | QXmlSimpleReader Validator; | ^~~~~~~~~ In file included from /usr/include/qt5/QtXml/QXmlInputSource:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:24: /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:86:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 86 | QXmlInputSource Input; | ^~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:153:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 153 | return QXmlDefaultHandler::startElement(namespaceURI, localName, qName, atts); | ^~~~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:163:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 163 | return QXmlDefaultHandler::endElement(namespaceURI, localName, qName); | ^~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:98:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 98 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Optimization")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp: In member function ‘void CQOptimizationResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:191:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 191 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:196:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 196 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQEllipseItem::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:90:12: warning: unused variable ‘m11’ [-Wunused-variable] 90 | double m11 = painter->transform().m11(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:472:34: warning: comparison of integer expressions of different signedness: ‘std::vector*>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 472 | if (mPopulation.size() > mMaxIterations) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In function ‘QString vec_to_string(CVector*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:541:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 541 | for (int i = 1; i < pVec->size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::update()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:720:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 720 | i == mMinIndex, | ~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:743:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 743 | i == mMinIndex, | ~~^~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp: In member function ‘void CQParameterEstimationResult::applyToModelState()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:309:15: warning: unused variable ‘current’ [-Wunused-variable] 309 | int current = model->rowCount(); | ^~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now 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-Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp: In static member function ‘static QVariant CQParameterOverviewDM::diffData(const CModelParameter*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:373:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 373 | switch (pNode->getCompareResult()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:400:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 400 | switch (pNode->getCompareResult()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:302591:127: note: in a call to allocation function ‘operator new []’ declared here 302591 | return (void *)((CCopasiParameter *) (CCopasiParameterGroup *)(CCopasiMethod *)(COptMethod *)(COptPopulationMethod *) ((COptMethodGA *) x)); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:302591:127: note: in a call to allocation function ‘operator new []’ declared here 302591 | return (void *)((CCopasiParameter *) (CCopasiParameterGroup *)(CCopasiMethod *)(COptMethod *)(COptPopulationMethod *) ((COptMethodGA *) x)); | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp: In member function ‘virtual QVariant CQParameterSetsDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:91:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 91 | if (mpListOfParameterSets->size() <= index.row()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp: In member function ‘virtual void CQParameterSetsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:267:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp: In member function ‘virtual void CQPlotsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:275:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/qabstractitemmodel.h:43, from /usr/include/qt5/QtCore/qabstractproxymodel.h:43, from /usr/include/qt5/QtCore/qsortfilterproxymodel.h:43, from /usr/include/qt5/QtCore/QSortFilterProxyModel:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:13: In member function ‘QMapNode::lowerBound(QAbstractButton* const&)’, inlined from ‘QMapData::findNode(QAbstractButton* const&) const’ at /usr/include/qt5/QtCore/qmap.h:288:33, inlined from ‘QMap::operator[](QAbstractButton* const&)’ at /usr/include/qt5/QtCore/qmap.h:681:26, inlined from ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:98:25: /usr/include/qt5/QtCore/qmap.h:153:9: warning: ‘pEditor’ may be used uninitialized [-Wmaybe-uninitialized] 153 | if (!qMapLessThanKey(n->key, akey)) { | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp: In member function ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:58:21: note: ‘pEditor’ was declared here 58 | QAbstractButton * pEditor; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In constructor ‘CQReactionsWidget::CQReactionsWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:81:22: warning: unused variable ‘pWindow’ [-Wunused-variable] 81 | CopasiUI3Window *pWindow = dynamic_cast(parent->parent()); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In member function ‘virtual void CQReactionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:230:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp: In member function ‘virtual void CQReportsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:229:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:11, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp: In member function ‘virtual bool CQScanWidgetParameterSet::save(CCopasiParameterGroup*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:112:1: warning: control reaches end of non-void function [-Wreturn-type] 112 | } | ^ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:85:57: required from here 85 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Sensitivities")); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h: In constructor ‘CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:116:40: warning: ‘CQSimpleSelectionTree::mpOutputVector’ will be initialized after [-Wreorder] 116 | std::vector< const CDataObject * > * mpOutputVector; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:112:26: warning: ‘CExpressionGenerator* CQSimpleSelectionTree::mpExpressionGenerator’ [-Wreorder] 112 | CExpressionGenerator * mpExpressionGenerator; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget *parent) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:427:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: 427 | task = dynamic_cast(&pDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpinBoxDelegate.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp: In member function ‘virtual void CQSpeciesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:80:65: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 80 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:87:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 87 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:82:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 82 | dynamic_cast(&pDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSATimeScaleWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:224:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 224 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp: In member function ‘CQTSSAWidget::runTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:231:30: warning: ‘this’ pointer is null [-Wnonnull] 231 | mpTSSMethod->emptyVectors(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:157:8: note: in a call to non-static member function ‘CTSSAMethod::emptyVectors()’ 157 | void emptyVectors(); | ^~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:88: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:169, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:20: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp: In member function ‘void CQUndoTester::testModelDetail()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:163:11: warning: unused variable ‘pModel’ [-Wunused-variable] 163 | CModel* pModel = (*CRootContainer::getDatamodelList())[0].getModel(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp: In member function ‘virtual void CQUnitsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:245:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanContainerWidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CWindowInterface.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiSlider.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:71: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h: In constructor ‘DataModelGUI::DataModelGUI(QObject*, CDataModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:183:24: warning: ‘DataModelGUI::mpOutputHandlerPlot’ will be initialized after [-Wreorder] 183 | COutputHandlerPlot * mpOutputHandlerPlot; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:182:16: warning: ‘CDataModel* DataModelGUI::mpDataModel’ [-Wreorder] 182 | CDataModel * mpDataModel; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:96:1: warning: when initialized here [-Wreorder] 96 | DataModelGUI::DataModelGUI(QObject * parent, CDataModel * pDataModel): | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::notifyChanges(const CUndoData::CChangeSet&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:819:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 819 | switch (it->type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::addRecentFile(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘OMEX’ not handled in switch [-Wswitch] 952 | switch (mpDataModel->getContentType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp: In member function ‘bool FunctionWidget1::loadParameterTable()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:152:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 152 | switch (params[i]->getUsage()) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/MyLineEdit.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserWidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp: In member function ‘void ReactionsWidget1::FillWidgetFromRI()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:406:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 406 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:16: /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:421:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 421 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensWidgetComboBox.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:861:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 861 | mpParentWindow->getMainWidget()->getTrajectoryWidget()->enter(pDataModel->getTaskList()->operator[]("Time-Course").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp: In member function ‘std::vector* SliderDialog::getCSlidersForObject(CDataObject*, std::vector*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:1087:8: warning: variable ‘issueWarning’ set but not used [-Wunused-but-set-variable] 1087 | bool issueWarning = false; | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h: In constructor ‘StateSubwidget::StateSubwidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:46:12: warning: ‘StateSubwidget::mpModel’ will be initialized after [-Wreorder] 46 | CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:45:28: warning: ‘const CSteadyStateTask* StateSubwidget::mpTask’ [-Wreorder] 45 | const CSteadyStateTask * mpTask; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:53:1: warning: when initialized here [-Wreorder] 53 | StateSubwidget::StateSubwidget(QWidget* parent, const char* name) | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiWidget.cpp In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:63: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:78: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:96: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:35: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h: In constructor ‘CopasiUI3Window::CopasiUI3Window()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:626:8: warning: ‘CopasiUI3Window::mSBWIgnoreShutdownEvent’ will be initialized after [-Wreorder] 626 | bool mSBWIgnoreShutdownEvent; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:459:11: warning: ‘QMenu* CopasiUI3Window::mpMenuSEDMLSupport’ [-Wreorder] 459 | QMenu * mpMenuSEDMLSupport; | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:242:1: warning: when initialized here [-Wreorder] 242 | CopasiUI3Window::CopasiUI3Window(): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotUpdateMIRIAM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 2551 | bool success = true; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:3856:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: 3856 | for (auto & task : taskList) /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotCheckForUpdateFinished(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:4195:24: warning: unused variable ‘pReject’ [-Wunused-variable] 4195 | QPushButton *pReject = Question.addButton(QMessageBox::Cancel); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:114: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::createWidgetFromId(const WidgetType&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 504 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findTabWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 837 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Model’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] 908 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp: In member function ‘void ParameterTable::updateTable(CReactionInterface&, CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:202:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 202 | switch (ri.getUsage(i)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QVariant getParameterValue(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:82:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 82 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QList > getParameterValidValues(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:146:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 146 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘bool setParameterValue(CCopasiParameter*, const QVariant&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:220:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 220 | switch (pParameter->getType()) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘QVariant CQUndoDM::displayData(const QModelIndex&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:98:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | if (mpUndoStack->size() <= index.row() || | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:107:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 107 | return (index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:116:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | if ((index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:153:20: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 153 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:197:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 197 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:241:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 241 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:104:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 104 | switch (static_cast< ColumnType >(index.column())) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘virtual QVariant CQUndoDM::headerData(int, Qt::Orientation, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:296:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 296 | switch (static_cast< ColumnType >(section)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 89%] Built target binding_python_lib [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG 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/usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors 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CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o /usr/bin/ranlib libCOPASIUI.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target libCOPASIUI /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/CMakeFiles/CopasiUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Building CXX object copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o -MF CMakeFiles/CopasiUI.dir/main.cpp.o.d -o CMakeFiles/CopasiUI.dir/main.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [100%] Linking CXX executable CopasiUI cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiUI.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiUI.dir/main.cpp.o -o CopasiUI ../libCOPASIUI.a /usr/lib64/libQt5Concurrent.so.5.15.12 /usr/lib64/libQt5Network.so.5.15.12 /usr/lib64/libQt5OpenGL.so.5.15.12 /usr/lib64/libQt5PrintSupport.so.5.15.12 /usr/lib64/libQt5Svg.so.5.15.12 /usr/lib64/libQt5Widgets.so.5.15.12 /usr/lib64/libQt5Xml.so.5.15.12 /usr/lib64/libQt5DataVisualization.so.5.15.12 /usr/lib64/libQt5Gui.so.5.15.12 /usr/lib64/libQt5Core.so.5.15.12 ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so /usr/lib64/libqwt-qt5.so /usr/lib64/libmml.so /usr/lib64/libqcustomplot-qt5.so /usr/lib64/libGL.so /usr/lib64/libGLU.so //usr/lib64/libSBW.so /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: warning: type ‘struct CQMmlScrollView’ violates the C++ One Definition Rule [-Wodr] 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a different type is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:51:16: note: the first difference of corresponding definitions is field ‘mpMmlWidget’ 51 | QtMmlWidget* mpMmlWidget; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a type with different number of fields is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_del ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_del ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_comp ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_comp ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp: In member function ‘data’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:70:10: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 70 | QVariant CQEFMSpeciesDM::data(const QModelIndex &index, int role) const | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target CopasiUI gmake[1]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.XLHmy4 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 ++ dirname /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + DESTDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 + /usr/bin/cmake --install . -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/_COPASI.so -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi.pth -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/COPASI.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/add_optitems.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/checkModel.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/custom_output.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example1.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example2.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example3.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example4.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example5.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example6.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example7.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example8.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/example9.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/get_steady_state.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/print_model_parameterset.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/process_callback.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/remove_reaction.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/remove_unused_elements.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/restore_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/run_mca.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/setup_sensitivities.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/to_local_parameters.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples/write_ids_to_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/bin/CopasiSE -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/bin/CopasiUI -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/bin/CopasiSBW -- Installing: 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/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ObjectBrowserSelection.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ObjectBrowserTree.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/OutputAssistant.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/PlotCurveSelectionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/PlotDefinition.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/PlotWindow.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ReactionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ReactionOverview.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ReactionOverviewEmpty.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/ReportDefinitionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/doc/html/figures/TimeCourseDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/CircadianClock.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/DimericMWC-stiff.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/Genetic-2000Elo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/MAPK-HF96-layout.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/Metabolism-2000Poo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/NF-kappaB-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/NF-kappaB.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/NF-kappaB.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/Olsen2003_peroxidase.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/YeastGlycolysis.gps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/brusselator-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/brusselator.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/brusselator.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/oscli.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/examples/scan.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/icons/copasi/icons/Copasi.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/icons/copasi/icons/CopasiDoc.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/copasi/config/MIRIAMResources.xml + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12/site-packages/copasi/examples + install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/icons/copasi/icons + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/applications + cat + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/metainfo + install -pm 644 /builddir/build/SOURCES/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/metainfo/ + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 4.42.284-5.fc40 --unique-debug-suffix -4.42.284-5.fc40.aarch64 --unique-debug-src-base COPASI-4.42.284-5.fc40.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/COPASI-Build-284 find-debuginfo: starting Extracting debug info from 4 files DWARF-compressing 4 files sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/COPASI-4.42.284-5.fc40.aarch64 cpio: copasi/CChemEqParser.ypp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser.ypp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser.ypp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_yacc.cpp: Cannot stat: No such file or directory 61495 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/COPASI-4.42.284-5.fc40.aarch64/copasi/odepack++/CRadau5.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.kVQH6r + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + desktop-file-validate /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/applications/COPASI.desktop + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/metainfo/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/metainfo/COPASI.appdata.xml: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: COPASI-4.42.284-5.fc40.aarch64 Provides: COPASI = 4.42.284-5.fc40 COPASI(aarch-64) = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: COPASI-sharp < 0:4.25.213-1 R-COPASI < 0:4.25.213-1 perl-COPASI < 0:4.25.213-1 Processing files: COPASI-gui-4.42.284-5.fc40.aarch64 Provides: COPASI-gui = 4.42.284-5.fc40 COPASI-gui(aarch-64) = 4.42.284-5.fc40 application() application(COPASI.desktop) metainfo() metainfo(COPASI.appdata.xml) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5DataVisualization.so.5()(64bit) libQt5DataVisualization.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5PrintSupport.so.5()(64bit) libQt5PrintSupport.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libQt5Xml.so.5()(64bit) libQt5Xml.so.5(Qt_5)(64bit) libSBW.so.2.12()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmml.so.2()(64bit) libqcustomplot-qt5.so.2()(64bit) libqwt-qt5.so.6.2()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: COPASI-data-4.42.284-5.fc40.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.UgI3S1 + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-data = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-COPASI-4.42.284-5.fc40.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Q0qS2k + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-COPASI = 4.42.284-5.fc40 python3-COPASI = 4.42.284-5.fc40 python3-COPASI(aarch-64) = 4.42.284-5.fc40 python3.12-COPASI = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libpython3.12.so.1.0()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Obsoletes: python-COPASI < 4.42.284-5.fc40 python2-COPASI < 0:4.25.213-1 Processing files: COPASI-doc-4.42.284-5.fc40.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.56WcZS + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-doc = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debugsource-4.42.284-5.fc40.aarch64 Provides: COPASI-debugsource = 4.42.284-5.fc40 COPASI-debugsource(aarch-64) = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debuginfo-4.42.284-5.fc40.aarch64 Provides: COPASI-debuginfo = 4.42.284-5.fc40 COPASI-debuginfo(aarch-64) = 4.42.284-5.fc40 debuginfo(build-id) = b952fd31fa101b7971246a50e93afad80caa9eba Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.42.284-5.fc40 Processing files: COPASI-gui-debuginfo-4.42.284-5.fc40.aarch64 Provides: COPASI-gui-debuginfo = 4.42.284-5.fc40 COPASI-gui-debuginfo(aarch-64) = 4.42.284-5.fc40 debuginfo(build-id) = 628615738ed8b095efd4155ad2219a5147284917 debuginfo(build-id) = f4398593ea754b12546fbc5a9d700f5a62fd9f82 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.42.284-5.fc40 Processing files: python3-COPASI-debuginfo-4.42.284-5.fc40.aarch64 Provides: debuginfo(build-id) = ac779c436b8b0f4c3e8ef6475cfdd082b90d5d8d python-COPASI-debuginfo = 4.42.284-5.fc40 python3-COPASI-debuginfo = 4.42.284-5.fc40 python3-COPASI-debuginfo(aarch-64) = 4.42.284-5.fc40 python3.12-COPASI-debuginfo = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.42.284-5.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 Wrote: /builddir/build/RPMS/COPASI-debugsource-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/python3-COPASI-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-data-4.42.284-5.fc40.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-doc-4.42.284-5.fc40.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-debuginfo-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/python3-COPASI-debuginfo-4.42.284-5.fc40.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-debuginfo-4.42.284-5.fc40.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.P50Uo9 + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + /usr/bin/rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.IPIOIZ + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + rm -rf COPASI-Build-284 COPASI-Build-284.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild COPASI-4.42.284-5.fc40.src.rpm Finish: build phase for COPASI-4.42.284-5.fc40.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1705956493.110265/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc40.src.rpm) Config(child) 18 minutes 14 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "src" }, { "name": "python3-COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI-gui-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI-gui", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI-data", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "noarch" }, { "name": "COPASI-doc", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "noarch" }, { "name": "python3-COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" }, { "name": "COPASI-debugsource", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "aarch64" } ] } RPMResults finished