Warning: Permanently added '54.174.25.65' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8133128-fedora-41-aarch64 --chroot fedora-41-aarch64 Version: 1.0 PID: 8897 Logging PID: 8898 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8133128, 'buildroot_pkgs': [], 'chroot': 'fedora-41-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'fdb43aaffcd6305477cba942dd32c20801e54fab', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '8.18.2-4', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-41-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8133128-fedora-41-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake'... Running: git checkout fdb43aaffcd6305477cba942dd32c20801e54fab -- cmd: ['git', 'checkout', 'fdb43aaffcd6305477cba942dd32c20801e54fab', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake rc: 0 stdout: stderr: Note: switching to 'fdb43aaffcd6305477cba942dd32c20801e54fab'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at fdb43aa automatic import of snakemake Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading snakemake-8.18.2.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-8.18.2.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/snakemake/snakemake-8.18.2.tar.gz/md5/3d16041877d242096026870afc84978e/snakemake-8.18.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8464k 100 8464k 0 0 208M 0 --:--:-- --:--:-- --:--:-- 211M INFO: Reading stdout from command: md5sum snakemake-8.18.2.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851947.301682 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728851947.301682 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake/snakemake.spec) Config(fedora-41-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1728851947.301682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-aarch64-bootstrap-1728851947.301682/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/79493479a64134290202c984a5c1b41ffde0f6cc86aa173be343a1266bf0b0b5/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/79493479a64134290202c984a5c1b41ffde0f6cc86aa173be343a1266bf0b0b5/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-1728851947.301682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc41.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc41.aarch64 dnf5-plugins-5.2.6.2-1.fc41.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 153.0 KiB/s | 18.0 KiB | 00m00s fedora 100% | 45.8 MiB/s | 34.0 MiB | 00m01s Copr repository 100% | 30.1 MiB/s | 3.2 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 92.0 MiB/s | 14.4 MiB | 00m00s Repositories loaded. 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ncurses-libs aarch64 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap aarch64 2.6.8-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 952.3 KiB openssl-libs aarch64 1:3.2.2-9.fc41 fedora 7.2 MiB p11-kit aarch64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB p11-kit-trust aarch64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 655.7 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam aarch64 1.6.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.0 MiB pam-libs aarch64 1.6.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.3 KiB pcre2 aarch64 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-56.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf aarch64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 990.0 B popt aarch64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline aarch64 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 753.3 KiB rpm aarch64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB rpm-build-libs aarch64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.7 KiB rpm-libs aarch64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 797.9 KiB rpm-sequoia aarch64 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB rust-srpm-macros noarch 26.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs aarch64 3.46.1-1.fc41 fedora 1.6 MiB systemd-libs aarch64 256.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB util-linux-core aarch64 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 212.3 KiB xz-libs aarch64 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 266.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB zlib-ng-compat aarch64 2.1.7-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.8 KiB zstd aarch64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 52 MiB. Need to download 52 MiB. After this operation, 303 MiB extra will be used (install 303 MiB, remove 0 B). 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KiB | 00m00s [117/153] libxml2-0:2.12.8-2.fc41.aarch 100% | 110.3 MiB/s | 677.8 KiB | 00m00s [118/153] lz4-libs-0:1.10.0-1.fc41.aarc 100% | 17.6 MiB/s | 72.3 KiB | 00m00s [119/153] crypto-policies-0:20241010-1. 100% | 17.7 MiB/s | 72.6 KiB | 00m00s [120/153] keyutils-libs-0:1.6.3-4.fc41. 100% | 7.8 MiB/s | 31.9 KiB | 00m00s [121/153] libverto-0:0.3.2-9.fc41.aarch 100% | 6.8 MiB/s | 20.9 KiB | 00m00s [122/153] basesystem-0:11-21.fc41.noarc 100% | 2.4 MiB/s | 7.4 KiB | 00m00s [123/153] gmp-1:6.3.0-2.fc41.aarch64 100% | 44.0 MiB/s | 270.1 KiB | 00m00s [124/153] mpfr-0:4.2.1-5.fc41.aarch64 100% | 52.9 MiB/s | 324.8 KiB | 00m00s [125/153] filesystem-0:3.18-29.fc42.aar 100% | 118.9 MiB/s | 1.1 MiB | 00m00s [126/153] elfutils-default-yama-scope-0 100% | 3.0 MiB/s | 12.3 KiB | 00m00s [127/153] elfutils-debuginfod-client-0: 100% | 7.2 MiB/s | 36.9 KiB | 00m00s [128/153] libstdc++-0:14.2.1-4.fc42.aar 100% | 101.6 MiB/s | 832.5 KiB | 00m00s [129/153] alternatives-0:1.30-1.fc41.aa 100% | 6.8 MiB/s | 41.5 KiB | 00m00s [130/153] ca-certificates-0:2024.2.69_v 100% | 92.2 MiB/s | 944.5 KiB | 00m00s [131/153] pcre2-syntax-0:10.44-1.fc41.1 100% | 36.6 MiB/s | 149.9 KiB | 00m00s [132/153] jansson-0:2.13.1-10.fc41.aarc 100% | 9.0 MiB/s | 45.9 KiB | 00m00s [133/153] libffi-0:3.4.6-3.fc42.aarch64 100% | 7.5 MiB/s | 38.3 KiB | 00m00s [134/153] p11-kit-trust-0:0.25.5-4.fc42 100% | 26.3 MiB/s | 134.4 KiB | 00m00s [135/153] p11-kit-0:0.25.5-4.fc42.aarch 100% | 64.8 MiB/s | 464.7 KiB | 00m00s [136/153] libtasn1-0:4.19.0-9.fc41.aarc 100% | 17.8 MiB/s | 73.0 KiB | 00m00s [137/153] fedora-release-0:42-0.4.noarc 100% | 2.4 MiB/s | 12.4 KiB | 00m00s [138/153] fedora-release-identity-basic 100% | 3.2 MiB/s | 13.2 KiB | 00m00s [139/153] libcurl-0:8.10.1-2.fc42.aarch 100% | 59.0 MiB/s | 362.8 KiB | 00m00s [140/153] libnghttp2-0:1.63.0-1.fc42.aa 100% | 18.7 MiB/s | 76.7 KiB | 00m00s [141/153] libssh-config-0:0.11.1-1.fc42 100% | 3.1 MiB/s | 9.4 KiB | 00m00s [142/153] libssh-0:0.11.1-1.fc42.aarch6 100% | 45.5 MiB/s | 233.0 KiB | 00m00s [143/153] gdb-minimal-0:15.1-2.fc42.aar 100% | 197.4 MiB/s | 4.1 MiB | 00m00s [144/153] xxhash-libs-0:0.8.2-4.fc42.aa 100% | 4.8 MiB/s | 34.6 KiB | 00m00s [145/153] libbrotli-0:1.1.0-5.fc41.aarc 100% | 42.3 MiB/s | 346.2 KiB | 00m00s [146/153] libpsl-0:0.21.5-4.fc41.aarch6 100% | 15.7 MiB/s | 64.4 KiB | 00m00s [147/153] libidn2-0:2.3.7-2.fc41.aarch6 100% | 27.6 MiB/s | 113.0 KiB | 00m00s [148/153] openldap-0:2.6.8-5.fc41.aarch 100% | 61.5 MiB/s | 251.8 KiB | 00m00s [149/153] libevent-0:2.1.12-14.fc41.aar 100% | 41.4 MiB/s | 254.6 KiB | 00m00s [150/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 7.0 MiB/s | 35.8 KiB | 00m00s [151/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 95.2 MiB/s | 780.2 KiB | 00m00s [152/153] publicsuffix-list-dafsa-0:202 100% | 14.2 MiB/s | 58.3 KiB | 00m00s [153/153] libunistring-0:1.1-8.fc41.aar 100% | 87.9 MiB/s | 539.8 KiB | 00m00s -------------------------------------------------------------------------------- [153/153] Total 100% | 125.3 MiB/s | 52.4 MiB | 00m00s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/155] Verify package files 100% | 721.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 2.4 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 171.8 MiB/s | 351.9 KiB | 00m00s [ 4/155] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 5/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 7/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/155] Installing fedora-gpg-keys-0: 100% | 28.0 MiB/s | 172.2 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.2 MiB/s | 23.8 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 47.3 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 2.2 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/155] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s [ 16/155] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 351.7 KiB | 00m00s [ 17/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/155] Installing ncurses-libs-0:6.5 100% | 281.1 MiB/s | 2.2 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 19/155] Installing glibc-0:2.40.9000- 100% | 231.6 MiB/s | 9.3 MiB | 00m00s [ 20/155] Installing bash-0:5.2.32-2.fc 100% | 286.6 MiB/s | 8.3 MiB | 00m00s [ 21/155] Installing glibc-common-0:2.4 100% | 286.3 MiB/s | 2.6 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 22/155] Installing glibc-gconv-extra- 100% | 529.7 MiB/s | 49.3 MiB | 00m00s [ 23/155] Installing zlib-ng-compat-0:2 100% | 128.2 MiB/s | 262.6 KiB | 00m00s [ 24/155] Installing xz-libs-1:5.6.3-2. 100% | 261.2 MiB/s | 267.5 KiB | 00m00s [ 25/155] Installing bzip2-libs-0:1.0.8 100% | 197.1 MiB/s | 201.9 KiB | 00m00s [ 26/155] Installing libuuid-0:2.40.2-8 100% | 194.0 MiB/s | 198.6 KiB | 00m00s [ 27/155] Installing readline-0:8.2-11. 100% | 245.9 MiB/s | 755.5 KiB | 00m00s [ 28/155] Installing popt-0:1.19-7.fc41 100% | 68.2 MiB/s | 279.5 KiB | 00m00s [ 29/155] Installing libblkid-0:2.40.2- 100% | 204.9 MiB/s | 419.7 KiB | 00m00s [ 30/155] Installing libxcrypt-0:4.4.36 100% | 196.1 MiB/s | 401.7 KiB | 00m00s [ 31/155] Installing libattr-0:2.5.2-4. 100% | 192.9 MiB/s | 197.5 KiB | 00m00s [ 32/155] Installing libacl-0:2.3.2-2.f 100% | 192.3 MiB/s | 196.9 KiB | 00m00s [ 33/155] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.3 KiB | 00m00s [ 34/155] Installing elfutils-libelf-0: 100% | 328.5 MiB/s | 1.3 MiB | 00m00s [ 35/155] Installing gmp-1:6.3.0-2.fc41 100% | 235.8 MiB/s | 724.2 KiB | 00m00s [ 36/155] Installing libstdc++-0:14.2.1 100% | 308.2 MiB/s | 2.8 MiB | 00m00s [ 37/155] Installing libeconf-0:0.6.2-3 100% | 202.9 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Installing libcap-0:2.70-4.fc 100% | 275.2 MiB/s | 1.4 MiB | 00m00s [ 51/155] Installing systemd-libs-0:256 100% | 315.1 MiB/s | 2.5 MiB | 00m00s [ 52/155] Installing lua-libs-0:5.4.6-6 100% | 192.5 MiB/s | 394.3 KiB | 00m00s [ 53/155] Installing libcom_err-0:1.47. 100% | 234.8 MiB/s | 240.4 KiB | 00m00s [ 54/155] Installing libsepol-0:3.7-3.f 100% | 284.8 MiB/s | 874.9 KiB | 00m00s [ 55/155] Installing pcre2-0:10.44-1.fc 100% | 295.2 MiB/s | 906.9 KiB | 00m00s [ 56/155] Installing libselinux-0:3.7-6 100% | 260.1 MiB/s | 266.3 KiB | 00m00s [ 57/155] Installing sed-0:4.9-3.fc41.a 100% | 164.3 MiB/s | 1.0 MiB | 00m00s [ 58/155] Installing findutils-1:4.10.0 100% | 234.2 MiB/s | 2.1 MiB | 00m00s [ 59/155] Installing grep-0:3.11-9.fc41 100% | 137.1 MiB/s | 1.1 MiB | 00m00s [ 60/155] Installing xz-1:5.6.3-2.fc42. 100% | 188.8 MiB/s | 1.5 MiB | 00m00s [ 61/155] Installing libmount-0:2.40.2- 100% | 236.8 MiB/s | 485.1 KiB | 00m00s [ 62/155] Installing lz4-libs-0:1.10.0- 100% | 256.5 MiB/s | 262.7 KiB | 00m00s [ 63/155] Installing alternatives-0:1.3 100% | 214.7 MiB/s | 219.9 KiB | 00m00s [ 64/155] Installing libffi-0:3.4.6-3.f 100% | 277.2 MiB/s | 283.8 KiB | 00m00s [ 65/155] Installing libtasn1-0:4.19.0- 100% | 139.4 MiB/s | 285.6 KiB | 00m00s [ 66/155] Installing p11-kit-0:0.25.5-4 100% | 203.5 MiB/s | 2.6 MiB | 00m00s [ 67/155] Installing libunistring-0:1.1 100% | 301.5 MiB/s | 1.8 MiB | 00m00s [ 68/155] Installing libidn2-0:2.3.7-2. 100% | 113.1 MiB/s | 463.1 KiB | 00m00s [ 69/155] Installing libpsl-0:0.21.5-4. 100% | 193.1 MiB/s | 197.7 KiB | 00m00s [ 70/155] Installing p11-kit-trust-0:0. 100% | 58.4 MiB/s | 657.4 KiB | 00m00s [ 71/155] Installing zstd-0:1.5.6-2.fc4 100% | 241.6 MiB/s | 1.7 MiB | 00m00s [ 72/155] Installing util-linux-core-0: 100% | 387.7 MiB/s | 6.2 MiB | 00m00s [ 73/155] Installing tar-2:1.35-4.fc41. 100% | 255.6 MiB/s | 3.1 MiB | 00m00s [ 74/155] Installing libsemanage-0:3.7- 100% | 118.3 MiB/s | 363.3 KiB | 00m00s [ 75/155] Installing shadow-utils-2:4.1 100% | 244.9 MiB/s | 7.3 MiB | 00m00s [ 76/155] Installing zip-0:3.0-41.fc41. 100% | 281.0 MiB/s | 1.1 MiB | 00m00s [ 77/155] Installing gdbm-1:1.23-7.fc41 100% | 227.9 MiB/s | 933.4 KiB | 00m00s [ 78/155] Installing cyrus-sasl-lib-0:2 100% | 345.2 MiB/s | 3.1 MiB | 00m00s [ 79/155] Installing libfdisk-0:2.40.2- 100% | 236.3 MiB/s | 483.9 KiB | 00m00s [ 80/155] Installing bzip2-0:1.0.8-19.f 100% | 211.0 MiB/s | 432.2 KiB | 00m00s [ 81/155] Installing libxml2-0:2.12.8-2 100% | 306.0 MiB/s | 2.1 MiB | 00m00s [ 82/155] Installing sqlite-libs-0:3.46 100% | 259.8 MiB/s | 1.6 MiB | 00m00s [ 83/155] Installing add-determinism-0: 100% | 299.7 MiB/s | 2.1 MiB | 00m00s [ 84/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 85/155] Installing ed-0:1.20.2-2.fc41 100% | 139.2 MiB/s | 285.1 KiB | 00m00s [ 86/155] Installing patch-0:2.7.6-25.f 100% | 191.5 MiB/s | 392.1 KiB | 00m00s [ 87/155] Installing elfutils-default-y 100% | 291.9 KiB/s | 2.0 KiB | 00m00s [ 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218.1 MiB/s | 223.4 KiB | 00m00s [101/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [102/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [103/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [104/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [105/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [106/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [107/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [108/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [109/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [110/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [111/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [112/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [113/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [114/155] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [115/155] Installing coreutils-common-0 100% | 286.9 MiB/s | 11.2 MiB | 00m00s [116/155] Installing openssl-libs-1:3.2 100% | 313.5 MiB/s | 7.2 MiB | 00m00s [117/155] Installing coreutils-0:9.5-10 100% | 433.4 MiB/s | 20.8 MiB | 00m00s [118/155] Installing ca-certificates-0: 100% | 1.3 MiB/s | 2.4 MiB | 00m02s [119/155] Installing krb5-libs-0:1.21.3 100% | 257.4 MiB/s | 3.3 MiB | 00m00s [120/155] Installing libarchive-0:3.7.6 100% | 238.5 MiB/s | 976.8 KiB | 00m00s [121/155] Installing libtirpc-0:1.3.5-0 100% | 135.0 MiB/s | 276.5 KiB | 00m00s [122/155] Installing gzip-0:1.13-2.fc41 100% | 120.7 MiB/s | 494.4 KiB | 00m00s [123/155] Installing authselect-libs-0: 100% | 132.1 MiB/s | 946.8 KiB | 00m00s [124/155] Installing cracklib-0:2.9.11- 100% | 132.0 MiB/s | 946.3 KiB | 00m00s [125/155] Installing libpwquality-0:1.4 100% | 158.2 MiB/s | 1.1 MiB | 00m00s [126/155] Installing libnsl2-0:2.0.1-2. 100% | 109.0 MiB/s | 223.2 KiB | 00m00s [127/155] Installing pam-0:1.6.1-6.fc42 100% | 356.1 MiB/s | 11.0 MiB | 00m00s [128/155] Installing libssh-0:0.11.1-1. 100% | 212.1 MiB/s | 651.7 KiB | 00m00s [129/155] Installing rpm-sequoia-0:1.7. 100% | 287.1 MiB/s | 2.3 MiB | 00m00s [130/155] Installing rpm-libs-0:4.20.0- 100% | 260.2 MiB/s | 799.4 KiB | 00m00s [131/155] Installing rpm-build-libs-0:4 100% | 128.7 MiB/s | 263.6 KiB | 00m00s [132/155] Installing libevent-0:2.1.12- 100% | 304.7 MiB/s | 1.5 MiB | 00m00s [133/155] Installing openldap-0:2.6.8-5 100% | 233.4 MiB/s | 956.1 KiB | 00m00s [134/155] Installing libcurl-0:8.10.1-2 100% | 279.8 MiB/s | 859.5 KiB | 00m00s [135/155] Installing elfutils-debuginfo 100% | 194.8 MiB/s | 398.9 KiB | 00m00s [136/155] Installing binutils-0:2.43.1- 100% | 329.9 MiB/s | 33.0 MiB | 00m00s [137/155] Installing elfutils-0:0.191-8 100% | 353.9 MiB/s | 5.0 MiB | 00m00s [138/155] Installing gdb-minimal-0:15.1 100% | 309.0 MiB/s | 13.0 MiB | 00m00s [139/155] Installing debugedit-0:5.0-18 100% | 245.1 MiB/s | 502.0 KiB | 00m00s [140/155] Installing curl-0:8.10.1-2.fc 100% | 43.9 MiB/s | 583.8 KiB | 00m00s [141/155] Installing rpm-0:4.20.0-1.fc4 100% | 139.9 MiB/s | 3.4 MiB | 00m00s [142/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [143/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [144/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.20.0 100% | 349.3 MiB/s | 1.4 MiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 346.0 MiB/s | 17.0 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 102.2 MiB/s | 313.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 263.2 KiB/s | 614.1 KiB | 00m02s Warning: skipped PGP checks for 150 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.0-1.fc42.aarch64 alternatives-1.30-1.fc41.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.aarch64 authselect-1.5.0-8.fc42.aarch64 authselect-libs-1.5.0-8.fc42.aarch64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.aarch64 binutils-2.43.1-2.fc41.aarch64 build-reproducibility-srpm-macros-0.4.0-1.fc42.noarch bzip2-1.0.8-19.fc41.aarch64 bzip2-libs-1.0.8-19.fc41.aarch64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.aarch64 coreutils-common-9.5-10.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc41.aarch64 crypto-policies-20241010-1.git8baf557.fc42.noarch curl-8.10.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.0-18.fc42.aarch64 diffutils-3.10-8.fc41.aarch64 dwz-0.15-8.fc42.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.aarch64 elfutils-debuginfod-client-0.191-8.fc41.aarch64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.aarch64 elfutils-libs-0.191-8.fc41.aarch64 fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.4.noarch fedora-release-common-42-0.4.noarch fedora-release-identity-basic-42-0.4.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.aarch64 file-libs-5.45-7.fc41.aarch64 filesystem-3.18-29.fc42.aarch64 findutils-4.10.0-4.fc41.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.1-2.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-6.fc42.aarch64 glibc-common-2.40.9000-6.fc42.aarch64 glibc-gconv-extra-2.40.9000-6.fc42.aarch64 glibc-minimal-langpack-2.40.9000-6.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.aarch64 gzip-1.13-2.fc41.aarch64 info-7.1.1-1.fc42.aarch64 jansson-2.13.1-10.fc41.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.aarch64 krb5-libs-1.21.3-2.fc41.aarch64 libacl-2.3.2-2.fc41.aarch64 libarchive-3.7.6-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc41.aarch64 libcap-2.70-4.fc41.aarch64 libcap-ng-0.8.5-3.fc41.aarch64 libcom_err-1.47.1-3.fc41.aarch64 libcurl-8.10.1-2.fc42.aarch64 libeconf-0.6.2-3.fc41.aarch64 libevent-2.1.12-14.fc41.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-14.2.1-4.fc42.aarch64 libgomp-14.2.1-4.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.63.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.7-6.fc42.aarch64 libsemanage-3.7-3.fc42.aarch64 libsepol-3.7-3.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.5-0.fc41.aarch64 libtool-ltdl-2.4.7-12.fc41.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-7.fc41.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.6-6.fc41.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.aarch64 openssl-libs-3.2.2-9.fc41.aarch64 p11-kit-0.25.5-4.fc42.aarch64 p11-kit-trust-0.25.5-4.fc42.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.aarch64 pam-libs-1.6.1-6.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.aarch64 rpm-build-4.20.0-1.fc42.aarch64 rpm-build-libs-4.20.0-1.fc42.aarch64 rpm-libs-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-5.fc42.aarch64 sqlite-libs-3.46.1-1.fc41.aarch64 systemd-libs-256.7-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-64.fc41.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-2.fc42.aarch64 xz-libs-5.6.3-2.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.aarch64 zlib-ng-compat-2.1.7-3.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-aarch64-1728851947.301682/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-nk7f9r4h/snakemake/snakemake.spec) Config(child) 0 minutes 26 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc42.src.rpm) Config(fedora-41-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1728851947.301682/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1728851947.301682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-1728851947.301682/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc41.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc41.aarch64 dnf5-plugins-5.2.6.2-1.fc41.aarch64 Finish: chroot init Start: build phase for snakemake-8.18.2-4.fc42.src.rpm Start: build setup for snakemake-8.18.2-4.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Updating and loading repositories: fedora 100% | 440.1 KiB/s | 13.6 KiB | 00m00s updates 100% | 59.7 KiB/s | 14.9 KiB | 00m00s Copr repository 100% | 102.5 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 166.5 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: environment-modules aarch64 5.4.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB graphviz aarch64 12.1.2-1.fc42 copr_base 26.1 MiB help2man noarch 1.49.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 415.6 KiB python-unversioned-command noarch 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.0 B python3-boto3 noarch 1.35.39-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB python3-devel aarch64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-flask noarch 1:3.0.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863.3 KiB python3-google-cloud-storage noarch 2.14.0-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-pandas aarch64 2.2.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.6 MiB python3-pytest noarch 8.3.3-1.fc42 copr_base 20.8 MiB python3-pytest-mock noarch 3.14.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.0 KiB python3-snakemake-executor-plugin-cluster-generic noarch 1.0.9-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.7 KiB python3-snakemake-storage-plugin-fs noarch 1.0.6-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.7 KiB python3-snakemake-storage-plugin-http noarch 0.2.3-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.3 KiB python3-snakemake-storage-plugin-s3 noarch 0.2.12-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.3 KiB singularity-ce aarch64 4.2.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 176.8 MiB strace aarch64 6.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB stress aarch64 1.0.7-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 235.9 KiB vim-filesystem noarch 2:9.1.737-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB abseil-cpp aarch64 20240722.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.2 MiB adobe-mappings-cmap noarch 20230622-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 MiB adobe-mappings-cmap-deprecated noarch 20230622-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 582.1 KiB adobe-mappings-pdf noarch 20190401-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.4 MiB avahi-libs aarch64 0.8-30.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 614.5 KiB c-ares aarch64 1.33.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 336.5 KiB cairo aarch64 1.18.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB 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urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB urw-base35-p052-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.8 KiB xml-common noarch 0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB yajl aarch64 2.1.0-24.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 598.6 KiB Transaction Summary: Installing: 276 packages Total size of inbound packages is 191 MiB. Need to download 191 MiB. After this operation, 945 MiB extra will be used (install 945 MiB, remove 0 B). [ 1/276] help2man-0:1.49.3-6.fc41.noar 100% | 5.7 MiB/s | 216.7 KiB | 00m00s [ 2/276] python-unversioned-command-0: 100% | 2.6 MiB/s | 10.9 KiB | 00m00s [ 3/276] python3-devel-0:3.13.0-1.fc42 100% | 21.8 MiB/s | 357.0 KiB | 00m00s [ 4/276] environment-modules-0:5.4.0-2 100% | 11.8 MiB/s | 722.5 KiB | 00m00s [ 5/276] python3-flask-1:3.0.3-6.fc41. 100% | 17.9 MiB/s | 201.8 KiB | 00m00s [ 6/276] python3-boto3-0:1.35.39-1.fc4 100% | 24.4 MiB/s | 375.3 KiB | 00m00s [ 7/276] python3-google-cloud-storage- 100% | 21.7 MiB/s | 200.0 KiB | 00m00s [ 8/276] python3-pytest-mock-0:3.14.0- 100% | 6.1 MiB/s | 37.6 KiB | 00m00s [ 9/276] graphviz-0:12.1.2-1.fc42.aarc 100% | 49.7 MiB/s | 4.7 MiB | 00m00s [ 10/276] python3-snakemake-executor-pl 100% | 2.3 MiB/s | 23.8 KiB | 00m00s [ 11/276] python3-snakemake-storage-plu 100% | 3.4 MiB/s | 21.1 KiB | 00m00s [ 12/276] python3-snakemake-storage-plu 100% | 1.3 MiB/s | 21.1 KiB | 00m00s [ 13/276] python3-snakemake-storage-plu 100% | 3.3 MiB/s | 23.6 KiB | 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systemd-pam-0:256.7-1.fc42.aa 100% | 38.4 MiB/s | 393.3 KiB | 00m00s [219/276] google-noto-fonts-common-0:20 100% | 3.5 MiB/s | 17.8 KiB | 00m00s [220/276] google-noto-sans-vf-fonts-0:2 100% | 58.0 MiB/s | 593.9 KiB | 00m00s [221/276] systemd-0:256.7-1.fc42.aarch6 100% | 187.9 MiB/s | 5.4 MiB | 00m00s [222/276] avahi-libs-0:0.8-30.fc42.aarc 100% | 8.1 MiB/s | 66.5 KiB | 00m00s [223/276] libXext-0:1.3.6-2.fc41.aarch6 100% | 4.2 MiB/s | 38.8 KiB | 00m00s [224/276] dbus-libs-1:1.14.10-4.fc41.aa 100% | 25.3 MiB/s | 155.3 KiB | 00m00s [225/276] pixman-0:0.43.4-2.fc41.aarch6 100% | 29.9 MiB/s | 214.6 KiB | 00m00s [226/276] dbus-1:1.14.10-4.fc41.aarch64 100% | 1.5 MiB/s | 7.9 KiB | 00m00s [227/276] perl-mro-0:1.29-511.fc41.aarc 100% | 4.8 MiB/s | 29.6 KiB | 00m00s [228/276] openblas-openmp-0:0.3.26-5.fc 100% | 147.8 MiB/s | 3.8 MiB | 00m00s [229/276] perl-overloading-0:0.02-511.f 100% | 1.3 MiB/s | 12.9 KiB | 00m00s [230/276] perl-IO-0:1.55-511.fc41.aarch 100% | 10.9 MiB/s | 77.8 KiB | 00m00s [231/276] perl-Pod-Perldoc-0:3.28.01-51 100% | 11.2 MiB/s | 80.5 KiB | 00m00s [232/276] perl-podlators-1:6.0.2-2.fc41 100% | 20.3 MiB/s | 124.8 KiB | 00m00s [233/276] perl-File-Temp-1:0.231.100-51 100% | 11.5 MiB/s | 59.1 KiB | 00m00s [234/276] perl-IPC-Open3-0:1.22-511.fc4 100% | 4.3 MiB/s | 21.8 KiB | 00m00s [235/276] perl-HTTP-Tiny-0:0.088-512.fc 100% | 9.1 MiB/s | 55.8 KiB | 00m00s [236/276] libicu-0:74.2-2.fc41.aarch64 100% | 184.0 MiB/s | 10.3 MiB | 00m00s [237/276] perl-Symbol-0:1.09-511.fc41.n 100% | 1.1 MiB/s | 14.2 KiB | 00m00s [238/276] perl-Pod-Simple-1:3.45-511.fc 100% | 14.6 MiB/s | 209.6 KiB | 00m00s [239/276] perl-Socket-4:2.038-511.fc41. 100% | 13.5 MiB/s | 55.5 KiB | 00m00s [240/276] perl-File-stat-0:1.14-511.fc4 100% | 3.3 MiB/s | 17.0 KiB | 00m00s [241/276] perl-SelectSaver-0:1.02-511.f 100% | 2.3 MiB/s | 11.7 KiB | 00m00s [242/276] perl-Mozilla-CA-0:20240924-1. 100% | 3.5 MiB/s | 14.5 KiB | 00m00s [243/276] perl-IO-Socket-SSL-0:2.089-1. 100% | 37.6 MiB/s | 231.2 KiB | 00m00s [244/276] perl-Net-SSLeay-0:1.94-7.fc41 100% | 58.2 MiB/s | 357.4 KiB | 00m00s [245/276] perl-Time-Local-2:1.350-511.f 100% | 5.6 MiB/s | 34.5 KiB | 00m00s [246/276] perl-Class-Struct-0:0.68-511. 100% | 4.3 MiB/s | 22.0 KiB | 00m00s [247/276] perl-File-Path-0:2.18-511.fc4 100% | 6.9 MiB/s | 35.3 KiB | 00m00s [248/276] libXau-0:1.0.11-7.fc41.aarch6 100% | 7.9 MiB/s | 32.4 KiB | 00m00s [249/276] openblas-0:0.3.26-5.fc41.aarc 100% | 6.3 MiB/s | 38.7 KiB | 00m00s [250/276] libaom-0:3.9.0-3.fc41.aarch64 100% | 131.2 MiB/s | 1.6 MiB | 00m00s [251/276] libdav1d-0:1.4.3-2.fc41.aarch 100% | 38.2 MiB/s | 351.9 KiB | 00m00s [252/276] rav1e-libs-0:0.7.1-4.fc42.aar 100% | 76.9 MiB/s | 787.1 KiB | 00m00s [253/276] nettle-0:3.10-3.fc41.aarch64 100% | 53.5 MiB/s | 437.9 KiB | 00m00s [254/276] dbus-broker-0:36-4.fc41.aarch 100% | 23.3 MiB/s | 167.3 KiB | 00m00s [255/276] svt-av1-libs-0:2.1.0-2.fc41.a 100% | 103.2 MiB/s | 1.3 MiB | 00m00s [256/276] perl-Term-ANSIColor-0:5.01-51 100% | 9.3 MiB/s | 47.7 KiB | 00m00s [257/276] perl-Term-Cap-0:1.18-511.fc41 100% | 4.3 MiB/s | 22.1 KiB | 00m00s [258/276] ncurses-0:6.5-2.20240629.fc41 100% | 58.3 MiB/s | 417.9 KiB | 00m00s [259/276] perl-Pod-Escapes-1:1.07-511.f 100% | 4.8 MiB/s | 19.8 KiB | 00m00s [260/276] perl-if-0:0.61.000-511.fc41.n 100% | 2.7 MiB/s | 14.0 KiB | 00m00s [261/276] perl-AutoLoader-0:5.74-511.fc 100% | 5.2 MiB/s | 21.2 KiB | 00m00s [262/276] perl-IO-Socket-IP-0:0.42-512. 100% | 10.2 MiB/s | 41.8 KiB | 00m00s [263/276] perl-URI-0:5.30-1.fc42.noarch 100% | 24.8 MiB/s | 127.2 KiB | 00m00s [264/276] dbus-common-1:1.14.10-4.fc41. 100% | 2.9 MiB/s | 14.7 KiB | 00m00s [265/276] perl-Data-Dumper-0:2.189-512. 100% | 13.5 MiB/s | 55.1 KiB | 00m00s [266/276] perl-MIME-Base32-0:1.303-21.f 100% | 5.0 MiB/s | 20.5 KiB | 00m00s [267/276] perl-Digest-MD5-0:2.59-5.fc41 100% | 8.8 MiB/s | 36.1 KiB | 00m00s [268/276] perl-libnet-0:3.15-512.fc41.n 100% | 24.0 MiB/s | 123.0 KiB | 00m00s [269/276] perl-B-0:1.89-511.fc41.aarch6 100% | 28.8 MiB/s | 177.2 KiB | 00m00s [270/276] perl-FileHandle-0:2.05-511.fc 100% | 3.0 MiB/s | 15.5 KiB | 00m00s [271/276] systemd-rpm-macros-0:256.7-1. 100% | 8.2 MiB/s | 33.5 KiB | 00m00s [272/276] perl-Digest-0:1.20-511.fc41.n 100% | 4.9 MiB/s | 24.9 KiB | 00m00s [273/276] python3-rpm-generators-0:14-1 100% | 7.2 MiB/s | 29.3 KiB | 00m00s [274/276] python-rpm-macros-0:3.13-3.fc 100% | 4.3 MiB/s | 17.7 KiB | 00m00s [275/276] pyproject-rpm-macros-0:1.15.1 100% | 7.0 MiB/s | 43.3 KiB | 00m00s [276/276] python3-rpm-macros-0:3.13-3.f 100% | 3.0 MiB/s | 12.4 KiB | 00m00s -------------------------------------------------------------------------------- [276/276] Total 100% | 177.6 MiB/s | 191.4 MiB | 00m01s Running transaction [ 1/278] Verify package files 100% | 401.0 B/s | 276.0 B | 00m01s [ 2/278] Prepare transaction 100% | 1.5 KiB/s | 276.0 B | 00m00s [ 3/278] Installing nspr-0:4.35.0-29.f 100% | 241.7 MiB/s | 742.6 KiB | 00m00s [ 4/278] Installing libpng-2:1.6.44-1. 100% | 163.7 MiB/s | 335.2 KiB | 00m00s [ 5/278] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 6/278] Installing urw-base35-fonts-c 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [ 7/278] Installing libgpg-error-0:1.5 100% | 224.9 MiB/s | 1.1 MiB | 00m00s [ 8/278] Installing libjpeg-turbo-0:3. 100% | 259.9 MiB/s | 798.5 KiB | 00m00s [ 9/278] Installing nss-util-0:3.104.0 100% | 338.0 MiB/s | 346.1 KiB | 00m00s [ 10/278] Installing libwebp-0:1.4.0-4. 100% | 309.7 MiB/s | 1.2 MiB | 00m00s [ 11/278] Installing expat-0:2.6.3-1.fc 100% | 264.5 MiB/s | 541.7 KiB | 00m00s [ 12/278] Installing libseccomp-0:2.5.5 100% | 237.6 MiB/s | 243.3 KiB | 00m00s [ 13/278] Installing libassuan-0:2.5.7- 100% | 275.1 MiB/s | 281.7 KiB | 00m00s [ 14/278] Installing python-rpm-macros- 100% | 22.3 MiB/s | 22.8 KiB | 00m00s [ 15/278] Installing libgfortran-0:14.2 100% | 217.4 MiB/s | 1.5 MiB | 00m00s [ 16/278] Installing tzdata-0:2024a-9.f 100% | 40.4 MiB/s | 1.9 MiB | 00m00s [ 17/278] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 18/278] Installing libICE-0:1.1.1-4.f 100% | 134.0 MiB/s | 274.5 KiB | 00m00s [ 19/278] Installing adobe-mappings-cma 100% | 262.1 MiB/s | 14.4 MiB | 00m00s [ 20/278] Installing groff-base-0:1.23. 100% | 179.3 MiB/s | 5.2 MiB | 00m00s [ 21/278] Installing openjpeg-0:2.5.2-4 100% | 131.8 MiB/s | 539.7 KiB | 00m00s [ 22/278] Installing lcms2-0:2.16-4.fc4 100% | 158.4 MiB/s | 486.5 KiB | 00m00s [ 23/278] Installing abseil-cpp-0:20240 100% | 466.7 MiB/s | 17.3 MiB | 00m00s [ 24/278] Installing json-c-0:0.17-4.fc 100% | 198.9 MiB/s | 203.7 KiB | 00m00s [ 25/278] Installing less-0:661-2.fc41. 100% | 284.0 MiB/s | 872.6 KiB | 00m00s [ 26/278] Installing fuse-common-0:3.16 100% | 0.0 B/s | 292.0 B | 00m00s [ 27/278] Installing fuse3-libs-0:3.16. 100% | 173.2 MiB/s | 354.7 KiB | 00m00s [ 28/278] Installing fuse3-0:3.16.2-4.f 100% | 224.8 MiB/s | 460.4 KiB | 00m00s [ 29/278] Installing fuse-0:2.9.9-22.fc 100% | 34.1 MiB/s | 734.1 KiB | 00m00s [ 30/278] Installing tpm2-tss-0:4.1.3-3 100% | 299.5 MiB/s | 3.6 MiB | 00m00s [ 31/278] Installing adobe-mappings-cma 100% | 190.5 MiB/s | 585.2 KiB | 00m00s [ 32/278] Installing libSM-0:1.2.4-4.fc 100% | 248.8 MiB/s | 254.7 KiB | 00m00s [ 33/278] Installing pyproject-rpm-macr 100% | 108.6 MiB/s | 111.2 KiB | 00m00s [ 34/278] Installing graphviz-libs-0:12 100% | 279.3 MiB/s | 2.0 MiB | 00m00s [ 35/278] Installing nss-softokn-freebl 100% | 227.8 MiB/s | 933.0 KiB | 00m00s [ 36/278] Installing nss-softokn-0:3.10 100% | 389.0 MiB/s | 2.7 MiB | 00m00s [ 37/278] Installing nss-sysinit-0:3.10 100% | 194.7 MiB/s | 199.4 KiB | 00m00s [ 38/278] Installing nss-0:3.104.0-1.fc 100% | 154.5 MiB/s | 2.2 MiB | 00m00s [ 39/278] Installing libgcrypt-0:1.11.0 100% | 238.5 MiB/s | 1.2 MiB | 00m00s [ 40/278] Installing libksba-0:1.6.7-2. 100% | 172.2 MiB/s | 529.0 KiB | 00m00s [ 41/278] Installing urw-base35-bookman 100% | 91.0 MiB/s | 1.4 MiB | 00m00s [ 42/278] Installing urw-base35-c059-fo 100% | 126.8 MiB/s | 1.4 MiB | 00m00s [ 43/278] Installing urw-base35-d050000 100% | 10.4 MiB/s | 85.4 KiB | 00m00s [ 44/278] Installing urw-base35-gothic- 100% | 105.7 MiB/s | 1.2 MiB | 00m00s [ 45/278] Installing urw-base35-nimbus- 100% | 105.2 MiB/s | 1.1 MiB | 00m00s [ 46/278] Installing urw-base35-nimbus- 100% | 113.8 MiB/s | 1.4 MiB | 00m00s [ 47/278] Installing urw-base35-nimbus- 100% | 159.6 MiB/s | 2.4 MiB | 00m00s [ 48/278] Installing urw-base35-p052-fo 100% | 124.0 MiB/s | 1.5 MiB | 00m00s [ 49/278] Installing urw-base35-standar 100% | 8.1 MiB/s | 66.0 KiB | 00m00s [ 50/278] Installing urw-base35-z003-fo 100% | 47.8 MiB/s | 391.8 KiB | 00m00s [ 51/278] Installing urw-base35-fonts-0 100% | 5.5 MiB/s | 5.6 KiB | 00m00s [ 52/278] Installing google-droid-sans- 100% | 260.8 MiB/s | 6.3 MiB | 00m00s [ 53/278] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s [ 54/278] Installing dbus-common-1:1.14 100% | 542.0 KiB/s | 13.6 KiB | 00m00s [ 55/278] Installing dbus-broker-0:36-4 100% | 60.2 MiB/s | 616.8 KiB | 00m00s [ 56/278] Installing dbus-1:1.14.10-4.f 100% | 0.0 B/s | 124.0 B | 00m00s [ 57/278] Installing systemd-pam-0:256. 100% | 194.1 MiB/s | 1.4 MiB | 00m00s [ 58/278] Installing systemd-0:256.7-1. 100% | 127.9 MiB/s | 29.4 MiB | 00m00s [ 59/278] Installing device-mapper-libs 100% | 166.7 MiB/s | 512.0 KiB | 00m00s [ 60/278] Installing device-mapper-0:1. 100% | 205.8 MiB/s | 632.1 KiB | 00m00s [ 61/278] Installing cryptsetup-libs-0: 100% | 268.7 MiB/s | 2.4 MiB | 00m00s [ 62/278] Installing cryptsetup-0:2.7.5 100% | 156.3 MiB/s | 800.5 KiB | 00m00s [ 63/278] Installing ncurses-0:6.5-2.20 100% | 337.8 MiB/s | 1.7 MiB | 00m00s [ 64/278] Installing perl-Digest-0:1.20 100% | 36.2 MiB/s | 37.1 KiB | 00m00s [ 65/278] Installing perl-B-0:1.89-511. 100% | 198.4 MiB/s | 609.4 KiB | 00m00s [ 66/278] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 67/278] Installing perl-Digest-MD5-0: 100% | 228.3 MiB/s | 233.8 KiB | 00m00s [ 68/278] Installing perl-MIME-Base32-0 100% | 31.4 MiB/s | 32.2 KiB | 00m00s [ 69/278] Installing perl-Data-Dumper-0 100% | 129.7 MiB/s | 265.7 KiB | 00m00s [ 70/278] Installing perl-libnet-0:3.15 100% | 95.9 MiB/s | 294.7 KiB | 00m00s [ 71/278] Installing perl-AutoLoader-0: 100% | 0.0 B/s | 20.9 KiB | 00m00s [ 72/278] Installing perl-IO-Socket-IP- 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [ 73/278] Installing perl-URI-0:5.30-1. 100% | 65.8 MiB/s | 269.5 KiB | 00m00s [ 74/278] Installing perl-Text-Tabs+Wra 100% | 23.3 MiB/s | 23.9 KiB | 00m00s [ 75/278] Installing perl-locale-0:1.12 100% | 0.0 B/s | 6.9 KiB | 00m00s [ 76/278] Installing perl-Mozilla-CA-0: 100% | 11.1 MiB/s | 11.3 KiB | 00m00s [ 77/278] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.6 KiB | 00m00s [ 78/278] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [ 79/278] Installing perl-Pod-Escapes-1 100% | 25.3 MiB/s | 25.9 KiB | 00m00s [ 80/278] Installing perl-if-0:0.61.000 100% | 6.1 MiB/s | 6.2 KiB | 00m00s [ 81/278] Installing perl-Net-SSLeay-0: 100% | 204.7 MiB/s | 1.4 MiB | 00m00s [ 82/278] Installing perl-IO-Socket-SSL 100% | 230.3 MiB/s | 707.4 KiB | 00m00s [ 83/278] Installing perl-POSIX-0:2.20- 100% | 160.4 MiB/s | 328.5 KiB | 00m00s [ 84/278] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 23.3 KiB | 00m00s [ 85/278] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 86/278] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.1 KiB | 00m00s [ 87/278] Installing perl-Term-ANSIColo 100% | 96.9 MiB/s | 99.2 KiB | 00m00s [ 88/278] Installing perl-Term-Cap-0:1. 100% | 29.9 MiB/s | 30.6 KiB | 00m00s [ 89/278] Installing perl-HTTP-Tiny-0:0 100% | 75.3 MiB/s | 154.2 KiB | 00m00s [ 90/278] Installing perl-Pod-Simple-1: 100% | 139.3 MiB/s | 570.5 KiB | 00m00s [ 91/278] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.2 KiB | 00m00s [ 92/278] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [ 93/278] Installing perl-Socket-4:2.03 100% | 133.9 MiB/s | 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00m01s Warning: skipped PGP checks for 276 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for snakemake-8.18.2-4.fc42.src.rpm Start: rpmbuild snakemake-8.18.2-4.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.iqgqy5 + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.oB8TIK + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf snakemake-8.18.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.18.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-8.18.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/3138.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') recursedown('./.github/ISSUE_TEMPLATE') recursedown('./.github/workflows') recursedown('./.github/workflows/scripts') recursedown('./apidocs') recursedown('./apidocs/_templates') recursedown('./apidocs/api_reference') recursedown('./apidocs/api_reference/internal') recursedown('./docs') recursedown('./docs/_static') recursedown('./docs/executing') recursedown('./docs/getting_started') recursedown('./docs/getting_started/img') recursedown('./docs/project_info') recursedown('./docs/project_info/img') recursedown('./docs/snakefiles') recursedown('./docs/snakefiles/images') recursedown('./docs/tutorial') recursedown('./docs/tutorial/workflow') 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no change ./tests/test_get_log_none/wrapper.py: no change ./tests/test_get_log_stderr/wrapper.py: no change ./tests/test_get_log_stdout/wrapper.py: no change ./tests/test_github_issue1158/qsub.py: updating ./tests/test_github_issue627/job.py: updating ./tests/test_github_issue_14/local_script.py: no change ./tests/test_github_issue_14/pythonTest.py: updating ./tests/test_handover/script.py: no change ./tests/test_issue1046/my_wrapper/wrapper.py: no change ./tests/test_issue916/local_script.py: no change ./tests/test_issue916/pythonTest.py: updating ./tests/test_job_properties/qsub.py: updating ./tests/test_local_import/bar.py: no change ./tests/test_local_import/foo/__init__.py: no change ./tests/test_paramspace/scripts/simulate.py: no change ./tests/test_paramspace_single_wildcard/scripts/simulate.py: no change ./tests/test_pipes/producer.py: no change ./tests/test_prebuilt_conda_script/test.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/__init__.py: no change ./tests/test_prebuilt_conda_script/dummy_package/src/dummy/dummy.py: no change ./tests/test_report_display_code/test.py: no change ./tests/test_restartable_job_cmd_exit_1/qsub.py: updating ./tests/test_restartable_job_qsub_exit_1/qsub.py: updating ./tests/test_script/scripts/test.py: no change ./tests/test_script_pre_py39/script.py: no change ./tests/test_script_py/scripts/test.py: no change ./tests/test_script_py/scripts/test_explicit_import.py: no change ./tests/test_singularity/script.py: no change ./tests/test_singularity_module/script.py: no change ./tests/test_string_resources/qsub.py: updating ./tests/test_tibanna/cleanup.py: no change ./tests/test_tibanna/scripts/step2.py: no change recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md 'misc/nano/README.md' -> 'README-nano.md' + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md 'misc/vim/README.md' -> 'README-vim.md' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.VOcDUL + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 182.4 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 76.9 KiB/s | 1.5 KiB | 00m00s updates 100% | 58.5 KiB/s | 14.9 KiB | 00m00s fedora 100% | 568.5 KiB/s | 13.6 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.aarch64" is already installed. Package "graphviz-12.1.2-1.fc42.aarch64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.aarch64" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.aarch64" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "strace-6.11-1.fc42.aarch64" is already installed. Package "stress-1.0.7-5.fc41.aarch64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pip noarch 24.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB python3-wheel noarch 1:0.43.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 516.1 KiB Transaction Summary: Installing: 2 packages Total size of inbound packages is 3 MiB. Need to download 3 MiB. After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B). [1/2] python3-wheel-1:0.43.0-4.fc41.noa 100% | 4.5 MiB/s | 151.0 KiB | 00m00s [2/2] python3-pip-0:24.2-2.fc42.noarch 100% | 32.5 MiB/s | 2.5 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 34.5 MiB/s | 2.7 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 200.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 44.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.43.0 100% | 65.3 MiB/s | 535.1 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [4/4] Installing python3-pip-0:24.2-2.f 100% | 85.1 MiB/s | 11.7 MiB | 00m00s Warning: skipped PGP checks for 2 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.LuEoSY + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: appdirs Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: immutables Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: docutils Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp <2.10,>=2.3.1 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pyyaml Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open <8.0,>=4.0 Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort <2.0,>=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: dpath <3.0.0,>=2.1.6 Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: conda-inject <2.0,>=1.3.1 Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slack-sdk ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pygments ; extra == 'reports' + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s updates 100% | 147.8 KiB/s | 14.9 KiB | 00m00s fedora 100% | 49.4 KiB/s | 13.6 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 191.5 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.aarch64" is already installed. Package "graphviz-12.1.2-1.fc42.aarch64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.aarch64" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.aarch64" is already installed. Package "python3-pip-24.2-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.aarch64" is already installed. Package "strace-6.11-1.fc42.aarch64" is already installed. Package "stress-1.0.7-5.fc41.aarch64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.43-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-appdirs noarch 1.4.4-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.7 KiB python3-conda-inject noarch 1.3.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.6 KiB python3-connection_pool noarch 0.0.3-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.2 KiB python3-datrie aarch64 0.8.2-27.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 520.6 KiB python3-docutils noarch 0.21.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 MiB python3-dpath noarch 2.2.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93.3 KiB python3-humanfriendly noarch 10.0-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 544.8 KiB python3-immutables aarch64 0.20-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 337.9 KiB python3-jsonschema noarch 4.19.1-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850.0 KiB python3-nbformat noarch 5.9.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 541.7 KiB python3-psutil aarch64 5.9.8-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-pulp noarch 2.8.0-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-pygments noarch 2.18.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.6 MiB python3-pyyaml aarch64 6.0.1-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 867.1 KiB python3-slackclient noarch 3.33.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB python3-smart_open noarch 7.0.5-1.fc42 copr_base 494.1 KiB python3-snakemake-interface-report-plugins noarch 1.0.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.1 KiB python3-stopit noarch 1.1.2-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.2 KiB python3-tabulate noarch 0.9.0-10.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342.0 KiB python3-toposort noarch 1.10-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.5 KiB python3-yte noarch 1.5.4-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 61.0 KiB Installing dependencies: git-core aarch64 2.47.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.0 MiB libcbor aarch64 0.11.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.0 KiB libedit aarch64 3.1-53.20240808cvs.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 344.2 KiB libfido2 aarch64 1.15.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342.4 KiB libyaml aarch64 0.2.5-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.6 KiB openssh aarch64 9.9p1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB openssh-clients aarch64 9.9p1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB python3-attrs noarch 24.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.1 KiB python3-boto noarch 2.49.0-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 MiB python3-fastjsonschema noarch 2.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 190.8 KiB python3-gitdb noarch 4.0.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503.9 KiB python3-jsonschema-specifications noarch 2023.11.2-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45.8 KiB python3-jupyter-core noarch 5.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.7 KiB python3-plac noarch 1.4.3-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230.2 KiB python3-referencing noarch 0.35.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.0 KiB python3-rpds-py aarch64 0.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 748.6 KiB python3-smmap noarch 5.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199.7 KiB python3-traitlets noarch 5.14.3-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 966.9 KiB python3-zombie-imp noarch 0.0.2-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58.4 KiB Transaction Summary: Installing: 41 packages Total size of inbound packages is 15 MiB. Need to download 15 MiB. After this operation, 70 MiB extra will be used (install 70 MiB, remove 0 B). [ 1/41] python3-conda-inject-0:1.3.2-3. 100% | 1.0 MiB/s | 18.8 KiB | 00m00s [ 2/41] python3-dpath-0:2.2.0-2.fc41.no 100% | 1.5 MiB/s | 37.9 KiB | 00m00s [ 3/41] python3-snakemake-interface-rep 100% | 5.2 MiB/s | 21.2 KiB | 00m00s [ 4/41] python3-toposort-0:1.10-12.fc41 100% | 4.0 MiB/s | 20.3 KiB | 00m00s [ 5/41] python3-pulp-0:2.8.0-6.fc41.noa 100% | 6.0 MiB/s | 233.0 KiB | 00m00s [ 6/41] python3-yte-0:1.5.4-6.fc41.noar 100% | 7.6 MiB/s | 31.3 KiB | 00m00s [ 7/41] python3-appdirs-0:1.4.4-24.fc42 100% | 5.7 MiB/s | 23.4 KiB | 00m00s [ 8/41] python3-connection_pool-0:0.0.3 100% | 4.2 MiB/s | 17.1 KiB | 00m00s [ 9/41] python3-datrie-0:0.8.2-27.fc41. 100% | 16.1 MiB/s | 148.3 KiB | 00m00s [10/41] python3-docutils-0:0.21.2-1.fc4 100% | 92.2 MiB/s | 1.0 MiB | 00m00s [11/41] python3-humanfriendly-0:10.0-13 100% | 33.6 MiB/s | 137.7 KiB | 00m00s [12/41] python3-immutables-0:0.20-7.fc4 100% | 14.6 MiB/s | 59.7 KiB | 00m00s [13/41] python3-GitPython-0:3.1.43-1.fc 100% | 25.0 MiB/s | 384.4 KiB | 00m00s [14/41] python3-jsonschema-0:4.19.1-6.f 100% | 30.7 MiB/s | 188.4 KiB | 00m00s [15/41] python3-nbformat-0:5.9.2-5.fc41 100% | 17.1 MiB/s | 122.9 KiB | 00m00s [16/41] python3-psutil-0:5.9.8-5.fc42.a 100% | 52.0 MiB/s | 266.1 KiB | 00m00s [17/41] python3-pyyaml-0:6.0.1-18.fc41. 100% | 41.5 MiB/s | 212.5 KiB | 00m00s [18/41] python3-slackclient-0:3.33.1-1. 100% | 61.6 MiB/s | 504.3 KiB | 00m00s [19/41] python3-stopit-0:1.1.2-12.fc41. 100% | 6.2 MiB/s | 25.6 KiB | 00m00s [20/41] python3-tabulate-0:0.9.0-10.fc4 100% | 17.5 MiB/s | 71.8 KiB | 00m00s [21/41] python3-plac-0:1.4.3-4.fc41.noa 100% | 15.3 MiB/s | 62.6 KiB | 00m00s [22/41] libyaml-0:0.2.5-15.fc41.aarch64 100% | 11.7 MiB/s | 59.8 KiB | 00m00s [23/41] python3-fastjsonschema-0:2.20.0 100% | 11.4 MiB/s | 58.5 KiB | 00m00s [24/41] python3-pygments-0:2.18.0-2.fc4 100% | 51.5 MiB/s | 2.4 MiB | 00m00s [25/41] python3-jupyter-core-0:5.7.2-3. 100% | 14.0 MiB/s | 71.4 KiB | 00m00s [26/41] python3-traitlets-0:5.14.3-3.fc 100% | 32.7 MiB/s | 200.8 KiB | 00m00s [27/41] python3-attrs-0:24.2.0-1.fc41.n 100% | 23.0 MiB/s | 118.0 KiB | 00m00s [28/41] python3-jsonschema-specificatio 100% | 7.0 MiB/s | 21.4 KiB | 00m00s [29/41] python3-referencing-0:0.35.1-3. 100% | 18.9 MiB/s | 77.3 KiB | 00m00s [30/41] python3-rpds-py-0:0.20.0-1.fc42 100% | 38.6 MiB/s | 276.6 KiB | 00m00s [31/41] python3-gitdb-0:4.0.11-1.fc42.n 100% | 25.4 MiB/s | 130.3 KiB | 00m00s [32/41] openssh-clients-0:9.9p1-3.fc42. 100% | 67.1 MiB/s | 756.1 KiB | 00m00s [33/41] openssh-0:9.9p1-3.fc42.aarch64 100% | 42.1 MiB/s | 345.2 KiB | 00m00s [34/41] git-core-0:2.47.0-1.fc42.aarch6 100% | 111.3 MiB/s | 4.9 MiB | 00m00s [35/41] python3-smart_open-0:7.0.5-1.fc 100% | 735.3 KiB/s | 119.1 KiB | 00m00s [36/41] python3-boto-0:2.49.0-23.fc41.n 100% | 98.9 MiB/s | 1.7 MiB | 00m00s [37/41] python3-smmap-0:5.0.1-1.fc42.no 100% | 10.9 MiB/s | 56.0 KiB | 00m00s [38/41] libedit-0:3.1-53.20240808cvs.fc 100% | 17.2 MiB/s | 105.7 KiB | 00m00s [39/41] libcbor-0:0.11.0-2.fc41.aarch64 100% | 8.0 MiB/s | 32.8 KiB | 00m00s [40/41] libfido2-0:1.15.0-2.fc41.aarch6 100% | 18.9 MiB/s | 97.0 KiB | 00m00s [41/41] python3-zombie-imp-0:0.0.2-7.fc 100% | 5.8 MiB/s | 29.5 KiB | 00m00s -------------------------------------------------------------------------------- [41/41] Total 100% | 76.8 MiB/s | 15.0 MiB | 00m00s Running transaction [ 1/43] Verify package files 100% | 719.0 B/s | 41.0 B | 00m00s [ 2/43] Prepare transaction 100% | 476.0 B/s | 41.0 B | 00m00s [ 3/43] Installing python3-rpds-py-0:0. 100% | 147.0 MiB/s | 752.5 KiB | 00m00s [ 4/43] Installing python3-attrs-0:24.2 100% | 100.3 MiB/s | 410.7 KiB | 00m00s [ 5/43] Installing python3-referencing- 100% | 109.3 MiB/s | 335.6 KiB | 00m00s [ 6/43] Installing python3-traitlets-0: 100% | 160.2 MiB/s | 984.0 KiB | 00m00s [ 7/43] Installing python3-jupyter-core 100% | 67.5 MiB/s | 207.5 KiB | 00m00s [ 8/43] Installing python3-jsonschema-s 100% | 18.0 MiB/s | 55.1 KiB | 00m00s [ 9/43] Installing python3-jsonschema-0 100% | 141.7 MiB/s | 870.3 KiB | 00m00s [10/43] Installing python3-zombie-imp-0 100% | 15.2 MiB/s | 62.4 KiB | 00m00s [11/43] Installing python3-boto-0:2.49. 100% | 145.2 MiB/s | 9.9 MiB | 00m00s [12/43] Installing libcbor-0:0.11.0-2.f 100% | 99.3 MiB/s | 203.4 KiB | 00m00s [13/43] Installing libfido2-0:1.15.0-2. 100% | 167.9 MiB/s | 343.9 KiB | 00m00s [14/43] Installing libedit-0:3.1-53.202 100% | 168.9 MiB/s | 345.8 KiB | 00m00s [15/43] Installing python3-smmap-0:5.0. 100% | 67.5 MiB/s | 207.4 KiB | 00m00s [16/43] Installing python3-gitdb-0:4.0. 100% | 101.6 MiB/s | 520.3 KiB | 00m00s [17/43] Installing openssh-0:9.9p1-3.fc 100% | 288.8 MiB/s | 1.4 MiB | 00m00s [18/43] Installing openssh-clients-0:9. 100% | 116.9 MiB/s | 3.5 MiB | 00m00s [19/43] Installing git-core-0:2.47.0-1. 100% | 333.9 MiB/s | 23.0 MiB | 00m00s [20/43] Installing python3-fastjsonsche 100% | 97.1 MiB/s | 198.8 KiB | 00m00s [21/43] Installing libyaml-0:0.2.5-15.f 100% | 257.8 MiB/s | 264.0 KiB | 00m00s [22/43] Installing python3-pyyaml-0:6.0 100% | 172.0 MiB/s | 880.8 KiB | 00m00s [23/43] Installing python3-plac-0:1.4.3 100% | 114.1 MiB/s | 233.7 KiB | 00m00s [24/43] Installing python3-dpath-0:2.2. 100% | 48.3 MiB/s | 99.0 KiB | 00m00s [25/43] Installing python3-yte-0:1.5.4- 100% | 32.4 MiB/s | 66.3 KiB | 00m00s [26/43] Installing python3-conda-inject 100% | 25.7 MiB/s | 26.3 KiB | 00m00s [27/43] Installing python3-nbformat-0:5 100% | 79.5 MiB/s | 569.9 KiB | 00m00s [28/43] Installing python3-GitPython-0: 100% | 184.5 MiB/s | 1.8 MiB | 00m00s [29/43] Installing python3-smart_open-0 100% | 123.6 MiB/s | 506.4 KiB | 00m00s [30/43] Installing python3-tabulate-0:0 100% | 168.7 MiB/s | 345.5 KiB | 00m00s [31/43] Installing python3-stopit-0:1.1 100% | 22.6 MiB/s | 69.5 KiB | 00m00s [32/43] Installing python3-slackclient- 100% | 105.0 MiB/s | 3.0 MiB | 00m00s [33/43] Installing python3-pygments-0:2 100% | 190.2 MiB/s | 10.8 MiB | 00m00s [34/43] Installing python3-psutil-0:5.9 100% | 295.8 MiB/s | 1.8 MiB | 00m00s [35/43] Installing python3-immutables-0 100% | 167.9 MiB/s | 343.8 KiB | 00m00s [36/43] Installing python3-humanfriendl 100% | 108.7 MiB/s | 556.3 KiB | 00m00s [37/43] Installing python3-docutils-0:0 100% | 162.8 MiB/s | 5.0 MiB | 00m00s [38/43] Installing python3-datrie-0:0.8 100% | 170.2 MiB/s | 522.7 KiB | 00m00s [39/43] Installing python3-connection_p 100% | 23.2 MiB/s | 23.8 KiB | 00m00s [40/43] Installing python3-appdirs-0:1. 100% | 69.2 MiB/s | 70.9 KiB | 00m00s [41/43] Installing python3-toposort-0:1 100% | 30.1 MiB/s | 30.9 KiB | 00m00s [42/43] Installing python3-snakemake-in 100% | 18.7 MiB/s | 38.3 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [43/43] Installing python3-pulp-0:2.8.0 100% | 11.8 MiB/s | 1.1 MiB | 00m00s Warning: skipped PGP checks for 41 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.i6DgZk + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 440.1 KiB/s | 13.6 KiB | 00m00s updates 100% | 304.5 KiB/s | 14.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 225.3 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 109.8 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "environment-modules-5.4.0-2.fc41.aarch64" is already installed. Package "graphviz-12.1.2-1.fc42.aarch64" is already installed. Package "help2man-1.49.3-6.fc41.noarch" is already installed. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python-unversioned-command-3.13.0-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.aarch64" is already installed. Package "python3-appdirs-1.4.4-24.fc42.noarch" is already installed. Package "python3-boto3-1.35.39-1.fc42.noarch" is already installed. Package "python3-configargparse-1.7-5.fc41.noarch" is already installed. Package "python3-connection_pool-0.0.3-13.fc41.noarch" is already installed. Package "python3-datrie-0.8.2-27.fc41.aarch64" is already installed. Package "python3-docutils-0.21.2-1.fc42.noarch" is already installed. Package "python3-flask-1:3.0.3-6.fc41.noarch" is already installed. Package "python3-GitPython-3.1.43-1.fc42.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-6.fc41.noarch" is already installed. Package "python3-humanfriendly-10.0-13.fc41.noarch" is already installed. Package "python3-immutables-0.20-7.fc41.aarch64" is already installed. Package "python3-jsonschema-4.19.1-6.fc41.noarch" is already installed. Package "python3-nbformat-5.9.2-5.fc41.noarch" is already installed. Package "python3-packaging-24.1-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.aarch64" is already installed. Package "python3-pip-24.2-2.fc42.noarch" is already installed. Package "python3-psutil-5.9.8-5.fc42.aarch64" is already installed. Package "python3-pygments-2.18.0-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.3-1.fc42.noarch" is already installed. Package "python3-pytest-mock-3.14.0-2.fc41.noarch" is already installed. Package "python3-pyyaml-6.0.1-18.fc41.aarch64" is already installed. Package "python3-reretry-0.11.8-11.fc41.noarch" is already installed. Package "python3-setuptools-69.2.0-8.fc41.noarch" is already installed. Package "python3-slackclient-3.33.1-1.fc42.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-3.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-1.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-6.fc41.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.2.12-1.fc42.noarch" is already installed. Package "python3-stopit-1.1.2-12.fc41.noarch" is already installed. Package "python3-tabulate-0.9.0-10.fc41.noarch" is already installed. Package "python3-throttler-1.2.2-11.fc41.noarch" is already installed. Package "python3-wheel-1:0.43.0-4.fc41.noarch" is already installed. Package "python3-wrapt-1.16.0-6.fc41.aarch64" is already installed. Package "strace-6.11-1.fc42.aarch64" is already installed. Package "stress-1.0.7-5.fc41.aarch64" is already installed. Package "vim-filesystem-2:9.1.737-1.fc42.noarch" is already installed. Nothing to do. Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1728777600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.5HRw9h + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 69.2.0) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake-8.18.2.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.20) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.4) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.2) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.1) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.8) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.8.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.0.5) Handling snakemake-interface-executor-plugins <10.0,>=9.2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.2.0 (installed: snakemake-interface-executor-plugins 9.3.2) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.3.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.0.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.0.0 (installed: snakemake-interface-report-plugins 1.0.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort <2.0,>=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort <2.0,>=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.33.1) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.18.0) + cat /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-buildrequires + rm -rfv snakemake-8.18.2.dist-info/ removed 'snakemake-8.18.2.dist-info/LICENSE.md' removed 'snakemake-8.18.2.dist-info/METADATA' removed 'snakemake-8.18.2.dist-info/entry_points.txt' removed 'snakemake-8.18.2.dist-info/top_level.txt' removed directory 'snakemake-8.18.2.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.rWBVKR + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info writing /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-modern-metadata-pzjlv3no/snakemake-8.18.2.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/storage.py -> build/lib/snakemake copying snakemake/spawn_jobs.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/ioutils.py -> build/lib/snakemake copying snakemake/ioflags.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/cli.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/api.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/settings copying snakemake/settings/types.py -> build/lib/snakemake/settings copying snakemake/settings/enums.py -> build/lib/snakemake/settings copying snakemake/settings/__init__.py -> build/lib/snakemake/settings creating build/lib/snakemake/script copying snakemake/script/__init__.py -> build/lib/snakemake/script creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/common.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/touch.py -> build/lib/snakemake/executors copying snakemake/executors/local.py -> build/lib/snakemake/executors copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common copying snakemake/common/typing.py -> build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/git.py -> build/lib/snakemake/common copying snakemake/common/configfile.py -> build/lib/snakemake/common copying snakemake/common/argparse.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/storage.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/common.py -> build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/__init__.py -> build/lib/snakemake/report/html_reporter creating build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/__init__.py -> build/lib/snakemake/report/html_reporter/template creating build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/timeline.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/runtimes.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rules.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rulegraph.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/results.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/packages.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/configfiles.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/common.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/categories.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/__init__.py -> build/lib/snakemake/report/html_reporter/data creating build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/__init__.py -> build/lib/snakemake/report/html_reporter/template/components creating build/lib/snakemake/common/tests copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests creating build/lib/snakemake/common/tests/testcases copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases creating build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple creating build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/html_reporter/template/style.css -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/index.html.jinja2 -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/logo.svg -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/components/subcategory.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/stats.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/search_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_graph.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_view_button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/report_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/navbar.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_item.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_heading.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/icon.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/content.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/common.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/category.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/app.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '8.18.2' installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64 creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-aarch64/wheel/snakemake creating build/bdist.linux-aarch64/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-aarch64/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-aarch64/wheel/snakemake/caching copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-aarch64/wheel/snakemake/caching creating build/bdist.linux-aarch64/wheel/snakemake/common creating build/bdist.linux-aarch64/wheel/snakemake/common/tests creating build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases creating build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/groups creating build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/common/tests/testcases copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/common/tests copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/git.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/typing.py -> build/bdist.linux-aarch64/wheel/snakemake/common copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-aarch64/wheel/snakemake/common creating build/bdist.linux-aarch64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-aarch64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-aarch64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-aarch64/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-aarch64/wheel/snakemake/deployment creating build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/local.py -> build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-aarch64/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-aarch64/wheel/snakemake/executors creating build/bdist.linux-aarch64/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-aarch64/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-aarch64/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-aarch64/wheel/snakemake/linting creating build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-aarch64/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-aarch64/wheel/snakemake/remote creating build/bdist.linux-aarch64/wheel/snakemake/report creating build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter creating build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/categories.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/common.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/configfiles.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/packages.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/results.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rulegraph.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rules.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/runtimes.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/timeline.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/data creating build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/logo.svg -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/index.html.jinja2 -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/style.css -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template creating build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_menu.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_results.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/app.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/button.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/category.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/common.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/content.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/icon.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_heading.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_item.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/menu.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/navbar.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/report_info.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_info.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_view_button.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_graph.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_info.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/search_results.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/stats.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/subcategory.js -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/common.py -> build/bdist.linux-aarch64/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/report copying build/lib/snakemake/report/common.py -> build/bdist.linux-aarch64/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-aarch64/wheel/snakemake/report creating build/bdist.linux-aarch64/wheel/snakemake/script copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/script creating build/bdist.linux-aarch64/wheel/snakemake/settings copying build/lib/snakemake/settings/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/settings copying build/lib/snakemake/settings/enums.py -> build/bdist.linux-aarch64/wheel/snakemake/settings copying build/lib/snakemake/settings/types.py -> build/bdist.linux-aarch64/wheel/snakemake/settings creating build/bdist.linux-aarch64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-aarch64/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-aarch64/wheel/snakemake/template_rendering creating build/bdist.linux-aarch64/wheel/snakemake/unit_tests creating build/bdist.linux-aarch64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-aarch64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-aarch64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/api.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/cli.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/ioflags.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/ioutils.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/storage.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-aarch64/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-aarch64/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-aarch64/wheel/snakemake-8.18.2-py3.13.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/snakemake-8.18.2.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir/pip-wheel-oa2y47ct/.tmp-cs4tzo83/snakemake-8.18.2-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/api.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cli.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/ioflags.py' adding 'snakemake/ioutils.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/spawn_jobs.py' adding 'snakemake/storage.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/storage.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/argparse.py' adding 'snakemake/common/configfile.py' adding 'snakemake/common/git.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/common/typing.py' adding 'snakemake/common/workdir_handler.py' adding 'snakemake/common/tests/__init__.py' adding 'snakemake/common/tests/testcases/__init__.py' adding 'snakemake/common/tests/testcases/groups/Snakefile' adding 'snakemake/common/tests/testcases/groups/__init__.py' adding 'snakemake/common/tests/testcases/simple/Snakefile' adding 'snakemake/common/tests/testcases/simple/__init__.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/dryrun.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/local.py' adding 'snakemake/executors/touch.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/common.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/html_reporter/__init__.py' adding 'snakemake/report/html_reporter/common.py' adding 'snakemake/report/html_reporter/data/__init__.py' adding 'snakemake/report/html_reporter/data/categories.py' adding 'snakemake/report/html_reporter/data/common.py' adding 'snakemake/report/html_reporter/data/configfiles.py' adding 'snakemake/report/html_reporter/data/packages.py' adding 'snakemake/report/html_reporter/data/results.py' adding 'snakemake/report/html_reporter/data/rulegraph.py' adding 'snakemake/report/html_reporter/data/rules.py' adding 'snakemake/report/html_reporter/data/runtimes.py' adding 'snakemake/report/html_reporter/data/timeline.py' adding 'snakemake/report/html_reporter/template/__init__.py' adding 'snakemake/report/html_reporter/template/index.html.jinja2' adding 'snakemake/report/html_reporter/template/logo.svg' adding 'snakemake/report/html_reporter/template/style.css' adding 'snakemake/report/html_reporter/template/components/__init__.py' adding 'snakemake/report/html_reporter/template/components/abstract_menu.js' adding 'snakemake/report/html_reporter/template/components/abstract_results.js' adding 'snakemake/report/html_reporter/template/components/app.js' adding 'snakemake/report/html_reporter/template/components/breadcrumbs.js' adding 'snakemake/report/html_reporter/template/components/button.js' adding 'snakemake/report/html_reporter/template/components/category.js' adding 'snakemake/report/html_reporter/template/components/common.js' adding 'snakemake/report/html_reporter/template/components/content.js' adding 'snakemake/report/html_reporter/template/components/icon.js' adding 'snakemake/report/html_reporter/template/components/list_heading.js' adding 'snakemake/report/html_reporter/template/components/list_item.js' adding 'snakemake/report/html_reporter/template/components/menu.js' adding 'snakemake/report/html_reporter/template/components/navbar.js' adding 'snakemake/report/html_reporter/template/components/report_info.js' adding 'snakemake/report/html_reporter/template/components/result_info.js' adding 'snakemake/report/html_reporter/template/components/result_view_button.js' adding 'snakemake/report/html_reporter/template/components/rule_graph.js' adding 'snakemake/report/html_reporter/template/components/rule_info.js' adding 'snakemake/report/html_reporter/template/components/search_results.js' adding 'snakemake/report/html_reporter/template/components/stats.js' adding 'snakemake/report/html_reporter/template/components/subcategory.js' adding 'snakemake/script/__init__.py' adding 'snakemake/settings/__init__.py' adding 'snakemake/settings/enums.py' adding 'snakemake/settings/types.py' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-8.18.2.dist-info/LICENSE.md' adding 'snakemake-8.18.2.dist-info/METADATA' adding 'snakemake-8.18.2.dist-info/WHEEL' adding 'snakemake-8.18.2.dist-info/entry_points.txt' adding 'snakemake-8.18.2.dist-info/top_level.txt' adding 'snakemake-8.18.2.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-8.18.2-py3-none-any.whl size=307216 sha256=2a3f594b6c35112551c4354912e737c0953355e52974ff0a1f091cbb527824b2 Stored in directory: /builddir/.cache/pip/wheels/b4/a9/cd/2536f65abc896962a23d47538f30fe428d1ceaa067828ea33b Successfully built snakemake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.GMaplZ + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build + mkdir /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 ++ xargs basename --multiple ++ ls /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==8.18.2 + '[' -z snakemake==8.18.2 ']' + TMPDIR=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir snakemake==8.18.2 Using pip 24.2 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-8.18.2-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake to 755 Successfully installed snakemake-8.18.2 + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/snakemake: updating + rm -rfv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --record /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-record + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/RECORD' + rm -fv /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED removed '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.18.2.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-modules --buildroot /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/man/man1 + PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake + install -t /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/vim/vimfiles/README.md + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/scheduler.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/storage.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/target_jobs.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ruleinfo.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.opt-1.pyc: replacing with normalized version 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/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/argparse.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/simple/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/groups/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/tbdstring.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/local.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/storage.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 59 directories and 368 files, processed 130 inodes, 129 modified (42 replaced + 87 rewritten), 0 unsupported format, 0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.V6vCeQ + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.18.2 + '[' '!' -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-modules ']' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2-4.fc42.aarch64-pyproject-modules -e '*.tests*' -e snakemake.executors.flux Check import: snakemake Check import: snakemake.api Check import: snakemake.benchmark Check import: snakemake.caching Check import: snakemake.caching.hash Check import: snakemake.caching.local Check import: snakemake.caching.storage Check import: snakemake.checkpoints Check import: snakemake.cli Check import: snakemake.common Check import: snakemake.common.argparse Check import: snakemake.common.configfile Check import: snakemake.common.git Check import: snakemake.common.tbdstring Check import: snakemake.common.typing Check import: snakemake.common.workdir_handler Check import: snakemake.cwl Check import: snakemake.dag Check import: snakemake.decorators Check import: snakemake.deployment Check import: snakemake.deployment.conda Check import: snakemake.deployment.containerize Check import: snakemake.deployment.env_modules Check import: snakemake.deployment.singularity Check import: snakemake.exceptions Check import: snakemake.executors Check import: snakemake.executors.dryrun Check import: snakemake.executors.google_lifesciences_helper Check import: snakemake.executors.local Check import: snakemake.executors.touch Check import: snakemake.gui Check import: snakemake.io Check import: snakemake.ioflags Check import: snakemake.ioutils Check import: snakemake.jobs Check import: snakemake.linting Check import: snakemake.linting.links Check import: snakemake.linting.rules Check import: snakemake.linting.snakefiles Check import: snakemake.logging Check import: snakemake.modules Check import: snakemake.notebook Check import: snakemake.output_index Check import: snakemake.parser Check import: snakemake.path_modifier Check import: snakemake.persistence Check import: snakemake.profiles Check import: snakemake.remote Check import: snakemake.remote.AzBlob Check import: snakemake.remote.EGA Check import: snakemake.remote.FTP Check import: snakemake.remote.GS Check import: snakemake.remote.HTTP Check import: snakemake.remote.NCBI Check import: snakemake.remote.S3 Check import: snakemake.remote.S3Mocked Check import: snakemake.remote.SFTP Check import: snakemake.remote.XRootD Check import: snakemake.remote.dropbox Check import: snakemake.remote.gfal Check import: snakemake.remote.gridftp Check import: snakemake.remote.iRODS Check import: snakemake.remote.webdav Check import: snakemake.remote.zenodo Check import: snakemake.report Check import: snakemake.report.common Check import: snakemake.report.html_reporter Check import: snakemake.report.html_reporter.common Check import: snakemake.report.html_reporter.data Check import: snakemake.report.html_reporter.data.categories Check import: snakemake.report.html_reporter.data.common Check import: snakemake.report.html_reporter.data.configfiles Check import: snakemake.report.html_reporter.data.packages Check import: snakemake.report.html_reporter.data.results Check import: snakemake.report.html_reporter.data.rulegraph Check import: snakemake.report.html_reporter.data.rules Check import: snakemake.report.html_reporter.data.runtimes Check import: snakemake.report.html_reporter.data.timeline Check import: snakemake.report.html_reporter.template Check import: snakemake.report.html_reporter.template.components Check import: snakemake.report.rulegraph_spec Check import: snakemake.resources Check import: snakemake.ruleinfo Check import: snakemake.rules Check import: snakemake.scheduler Check import: snakemake.script Check import: snakemake.settings Check import: snakemake.settings.enums Check import: snakemake.settings.types Check import: snakemake.shell Check import: snakemake.sourcecache Check import: snakemake.spawn_jobs Check import: snakemake.storage Check import: snakemake.target_jobs Check import: snakemake.template_rendering Check import: snakemake.template_rendering.jinja2 Check import: snakemake.template_rendering.yte Check import: snakemake.unit_tests Check import: snakemake.unit_tests.templates Check import: snakemake.utils Check import: snakemake.workflow Check import: snakemake.wrapper + k='not test_ancient' + k='not test_ancient and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not 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and not test_peppy and not test_strict_mode' + k='not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not 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test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest -v -k 'not test_ancient and not test_containerized and not test_default_storage and not test_default_storage_local_job and not test_github_issue78 and not test_issue1083 and not test_load_metawrapper and not test_module_complex and not test_module_complex2 and not test_module_report and not test_module_with_script and not test_modules_meta_wrapper and not test_modules_prefix and not test_output_file_cache_storage and not test_report and not test_report_dir and not test_report_display_code and not test_report_zip and not test_rule_inheritance_globals and not test_storage and not test_shell_exec and not test_singularity_conda and not test_containerized and not test_cwl_singularity and not test_archive and not test_conda and not test_conda_create_envs_only and not test_conda_custom_prefix and not test_conda_function and not test_conda_global and not test_conda_named and not test_conda_pin_file and not test_conda_python_3_7_script and not test_conda_python_script and not test_converting_path_for_r_script and not test_deploy_hashing and not test_deploy_script and not test_issue1093 and not test_issue635 and not test_jupyter_notebook and not test_jupyter_notebook_draft and not test_prebuilt_conda_script and not test_script and not test_script_pre_py39 and not test_wrapper and not test_wrapper_local_git_prefix and not test_modules_peppy and not test_pep_pathlib and not test_peppy and not test_strict_mode and not test_upstream_conda and not test_group_job_resources_with_pipe' tests/tests.py tests/test_expand.py tests/test_io.py tests/test_schema.py tests/test_linting.py tests/test_executor_test_suite.py ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2 configfile: pyproject.toml plugins: mock-3.14.0 collecting ... collected 343 items / 60 deselected / 283 selected tests/tests.py::test_list_untracked PASSED [ 0%] tests/tests.py::test_delete_all_output PASSED [ 0%] tests/tests.py::test_github_issue_14 PASSED [ 1%] tests/tests.py::test_issue956 PASSED [ 1%] tests/tests.py::test01 PASSED [ 1%] tests/tests.py::test02 PASSED [ 2%] tests/tests.py::test03 PASSED [ 2%] tests/tests.py::test04 PASSED [ 2%] tests/tests.py::test05 PASSED [ 3%] tests/tests.py::test06 PASSED [ 3%] tests/tests.py::test07 PASSED [ 3%] tests/tests.py::test08 PASSED [ 4%] tests/tests.py::test09 PASSED [ 4%] tests/tests.py::test10 PASSED [ 4%] tests/tests.py::test11 PASSED [ 5%] 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tests/tests.py::test_url_include SKIPPED (no internet connection) [ 13%] tests/tests.py::test_touch PASSED [ 13%] tests/tests.py::test_touch_flag_with_directories PASSED [ 14%] tests/tests.py::test_config PASSED [ 14%] tests/tests.py::test_update_config PASSED [ 14%] tests/tests.py::test_config_merging PASSED [ 15%] tests/tests.py::test_wildcard_keyword PASSED [ 15%] tests/tests.py::test_benchmark PASSED [ 15%] tests/tests.py::test_benchmark_jsonl PASSED [ 16%] tests/tests.py::test_temp_expand PASSED [ 16%] tests/tests.py::test_wildcard_count_ambiguity PASSED [ 16%] tests/tests.py::test_multiple_includes PASSED [ 17%] tests/tests.py::test_name_override PASSED [ 17%] tests/tests.py::test_yaml_config PASSED [ 18%] tests/tests.py::test_symlink_temp SKIPPED (This does not work reliab...) [ 18%] tests/tests.py::test_empty_include PASSED [ 18%] tests/tests.py::test_shadow PASSED [ 19%] tests/tests.py::test_shadow_copy PASSED [ 19%] tests/tests.py::test_shadow_prefix PASSED [ 19%] tests/tests.py::test_shadowed_log PASSED [ 20%] tests/tests.py::test_until PASSED [ 20%] tests/tests.py::test_omitfrom PASSED [ 20%] tests/tests.py::test_nonstr_params PASSED [ 21%] tests/tests.py::test_delete_output PASSED [ 21%] tests/tests.py::test_input_generator PASSED [ 21%] tests/tests.py::test_symlink_time_handling PASSED [ 22%] tests/tests.py::test_protected_symlink_output PASSED [ 22%] tests/tests.py::test_get_log_none PASSED [ 22%] tests/tests.py::test_get_log_both PASSED [ 23%] tests/tests.py::test_get_log_stderr PASSED [ 23%] tests/tests.py::test_get_log_stdout PASSED [ 24%] tests/tests.py::test_get_log_complex PASSED [ 24%] tests/tests.py::test_spaces_in_fnames PASSED [ 24%] tests/tests.py::test_deferred_func_eval PASSED [ 25%] tests/tests.py::test_format_params PASSED [ 25%] tests/tests.py::test_rule_defined_in_for_loop PASSED [ 25%] tests/tests.py::test_issue381 PASSED [ 26%] tests/tests.py::test_format_wildcards PASSED [ 26%] tests/tests.py::test_with_parentheses PASSED [ 26%] tests/tests.py::test_dup_out_patterns PASSED [ 27%] tests/tests.py::test_issue2826_failed_binary_logs PASSED [ 27%] tests/tests.py::test_threads PASSED [ 27%] tests/tests.py::test_threads0 PASSED [ 28%] tests/tests.py::test_run_namedlist PASSED [ 28%] tests/tests.py::test_profile PASSED [ 28%] tests/tests.py::test_singularity SKIPPED (no internet connection) [ 29%] tests/tests.py::test_singularity_cluster SKIPPED (no internet connec...) [ 29%] tests/tests.py::test_singularity_invalid PASSED [ 30%] tests/tests.py::test_singularity_module_invalid PASSED [ 30%] tests/tests.py::test_singularity_none SKIPPED (no internet connection) [ 30%] tests/tests.py::test_singularity_global SKIPPED (no internet connection) [ 31%] tests/tests.py::test_issue612 PASSED [ 31%] tests/tests.py::test_bash PASSED [ 31%] tests/tests.py::test_inoutput_is_path PASSED [ 32%] tests/tests.py::test_log_input PASSED [ 32%] tests/tests.py::test_issue805 PASSED [ 32%] tests/tests.py::test_issue823_1 PASSED [ 33%] tests/tests.py::test_issue823_2 PASSED [ 33%] tests/tests.py::test_issue823_3 PASSED [ 33%] tests/tests.py::test_pathlib PASSED [ 34%] tests/tests.py::test_pathlib_missing_file PASSED [ 34%] tests/tests.py::test_group_jobs PASSED [ 34%] tests/tests.py::test_group_jobs_attempts PASSED [ 35%] tests/tests.py::test_groups_out_of_jobs PASSED [ 35%] tests/tests.py::test_group_jobs_resources PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_max_threads PASSED [ 36%] tests/tests.py::test_group_jobs_resources_with_limited_resources PASSED [ 36%] tests/tests.py::test_global_resource_limits_limit_scheduling_of_groups PASSED [ 37%] tests/tests.py::test_new_resources_can_be_defined_as_local PASSED [ 37%] tests/tests.py::test_resources_can_be_overwritten_as_global PASSED [ 37%] tests/tests.py::test_scopes_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_resources_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_excluded_resources_not_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_multicomp_group_jobs PASSED [ 39%] tests/tests.py::test_group_job_fail PASSED [ 39%] tests/tests.py::test_pipes_simple PASSED [ 39%] tests/tests.py::test_pipes_multiple PASSED [ 40%] tests/tests.py::test_pipes_fail PASSED [ 40%] tests/tests.py::test_validate PASSED [ 40%] tests/tests.py::test_validate_fail PASSED [ 41%] tests/tests.py::test_issue854 PASSED [ 41%] tests/tests.py::test_issue850 PASSED [ 42%] tests/tests.py::test_issue860 PASSED [ 42%] tests/tests.py::test_issue894 PASSED [ 42%] tests/tests.py::test_issue584 PASSED [ 43%] tests/tests.py::test_issue912 PASSED [ 43%] tests/tests.py::test_job_properties PASSED [ 43%] tests/tests.py::test_issue916 PASSED [ 44%] tests/tests.py::test_issue930 PASSED [ 44%] tests/tests.py::test_convert_to_cwl SKIPPED (Temporarily disable unt...) [ 44%] tests/tests.py::test_issue1037 PASSED [ 45%] tests/tests.py::test_issue1046 PASSED [ 45%] tests/tests.py::test_checkpoints PASSED [ 45%] tests/tests.py::test_checkpoints_dir PASSED [ 46%] tests/tests.py::test_issue1092 PASSED [ 46%] tests/tests.py::test_issue958 PASSED [ 46%] tests/tests.py::test_issue471 PASSED [ 47%] tests/tests.py::test_issue1085 PASSED [ 47%] tests/tests.py::test_pipes2 PASSED [ 48%] tests/tests.py::test_expand_flag PASSED [ 48%] tests/tests.py::test_default_resources PASSED [ 48%] tests/tests.py::test_tmpdir PASSED [ 49%] tests/tests.py::test_tmpdir_default PASSED [ 49%] tests/tests.py::test_issue1284 PASSED [ 49%] tests/tests.py::test_issue1281 PASSED [ 50%] tests/tests.py::test_filegraph PASSED [ 50%] tests/tests.py::test_batch PASSED [ 50%] tests/tests.py::test_batch_final PASSED [ 51%] tests/tests.py::test_batch_fail PASSED [ 51%] tests/tests.py::test_github_issue52 PASSED [ 51%] tests/tests.py::test_envvars PASSED [ 52%] tests/tests.py::test_github_issue105 PASSED [ 52%] tests/tests.py::test_github_issue413 PASSED [ 53%] tests/tests.py::test_github_issue627 PASSED [ 53%] tests/tests.py::test_github_issue727 PASSED [ 53%] tests/tests.py::test_github_issue988 PASSED [ 54%] tests/tests.py::test_github_issue1062 SKIPPED (ftp connections curre...) 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tests/tests.py::test_modules_all_exclude_1 PASSED [ 61%] tests/tests.py::test_modules_all_exclude_2 PASSED [ 61%] tests/tests.py::test_modules_specific PASSED [ 61%] tests/tests.py::test_use_rule_same_module PASSED [ 62%] tests/tests.py::test_module_no_prefixing_modified_paths PASSED [ 62%] tests/tests.py::test_module_worfklow_namespacing PASSED [ 62%] tests/tests.py::test_handover PASSED [ 63%] tests/tests.py::test_source_path PASSED [ 63%] tests/tests.py::test_filesep_windows_targets SKIPPED (Windows stuff) [ 63%] tests/tests.py::test_filesep_on_windows SKIPPED (Windows stuff) [ 64%] tests/tests.py::test_set_resources PASSED [ 64%] tests/tests.py::test_github_issue1069 PASSED [ 65%] tests/tests.py::test_max_jobs_per_timespan PASSED [ 65%] tests/tests.py::test_touch_pipeline_with_temp_dir PASSED [ 65%] tests/tests.py::test_all_temp PASSED [ 66%] tests/tests.py::test_github_issue1158 PASSED [ 66%] tests/tests.py::test_checkpoint_allowed_rules PASSED [ 66%] 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tests/tests.py::test_runtime_conversion_from_workflow_profile PASSED [ 80%] tests/tests.py::test_localrule PASSED [ 80%] tests/tests.py::test_module_wildcard_constraints PASSED [ 80%] tests/tests.py::test_config_yte PASSED [ 81%] tests/tests.py::test_missing_file_dryrun PASSED [ 81%] tests/tests.py::test_issue1256 PASSED [ 81%] tests/tests.py::test_resource_string_in_cli_or_profile PASSED [ 82%] tests/tests.py::test_resource_tbdstring PASSED [ 82%] tests/tests.py::test_queue_input PASSED [ 83%] tests/tests.py::test_queue_input_dryrun PASSED [ 83%] tests/tests.py::test_queue_input_forceall PASSED [ 83%] tests/tests.py::test_issue2685 PASSED [ 84%] tests/tests.py::test_set_resources_complex PASSED [ 84%] tests/tests.py::test_set_resources_human_readable PASSED [ 84%] tests/tests.py::test_call_inner PASSED [ 85%] tests/tests.py::test_update_flag PASSED [ 85%] tests/tests.py::test_list_input_changes PASSED [ 85%] tests/tests.py::test_summary PASSED [ 86%] tests/tests.py::test_exists PASSED [ 86%] tests/tests.py::test_handle_storage_multi_consumers PASSED [ 86%] tests/tests.py::test_github_issue2732 PASSED [ 87%] tests/tests.py::test_expand_list_of_functions PASSED [ 87%] tests/tests.py::test_scheduler_sequential_all_cores PASSED [ 87%] tests/tests.py::test_checkpoint_open PASSED [ 88%] tests/test_expand.py::test_simple_expand PASSED [ 88%] tests/test_expand.py::test_allow_missing PASSED [ 89%] tests/test_io.py::test_wildcard_regex PASSED [ 89%] tests/test_io.py::test_expand PASSED [ 89%] tests/test_schema.py::test_config PASSED [ 90%] tests/test_schema.py::test_config_ref PASSED [ 90%] tests/test_schema.py::test_dataframe PASSED [ 90%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 91%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 91%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 91%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 92%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 92%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 92%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 93%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 93%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 93%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 94%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 94%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 95%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 95%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 95%] tests/test_linting.py::test_lint[long_run-positive] PASSED [ 96%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 96%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 96%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 97%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 97%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 97%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 98%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 98%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 98%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_simple_workflow PASSED [ 99%] tests/test_executor_test_suite.py::TestWorkflows::test_group_workflow PASSED [100%] =============================== warnings summary =============================== tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked /usr/lib64/python3.13/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/tests.py: 4 warnings tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 272 passed, 11 skipped, 60 deselected, 19 warnings in 434.13s (0:07:14) ==== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-8.18.2-4.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.3zJvTH + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + cd snakemake-8.18.2 + DOCDIR=/builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/CHANGELOG.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-nano.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + cp -pr /builddir/build/BUILD/snakemake-8.18.2-build/snakemake-8.18.2/README-vim.md /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT/usr/share/doc/snakemake + RPM_EC=0 ++ jobs -p + exit 0 Provides: python3.13dist(snakemake) = 8.18.2 python3dist(snakemake) = 8.18.2 snakemake = 8.18.2-4.fc42 vim-snakemake = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.13dist(conda-inject) < 2~~ with python3.13dist(conda-inject) >= 1.3.1) (python3.13dist(dpath) < 3~~ with python3.13dist(dpath) >= 2.1.6) (python3.13dist(jinja2) < 4~~ with python3.13dist(jinja2) >= 3) (python3.13dist(pulp) < 2.10~~ with python3.13dist(pulp) >= 2.3.1) (python3.13dist(requests) < 3~~ with python3.13dist(requests) >= 2.8.1) (python3.13dist(smart-open) < 8~~ with python3.13dist(smart-open) >= 4) (python3.13dist(snakemake-interface-common) < 2~~ with python3.13dist(snakemake-interface-common) >= 1.17) (python3.13dist(snakemake-interface-executor-plugins) < 10~~ with python3.13dist(snakemake-interface-executor-plugins) >= 9.2) (python3.13dist(snakemake-interface-report-plugins) < 2~~ with python3.13dist(snakemake-interface-report-plugins) >= 1) (python3.13dist(snakemake-interface-storage-plugins) < 4~~ with python3.13dist(snakemake-interface-storage-plugins) >= 3.2.3) (python3.13dist(toposort) < 2~~ with python3.13dist(toposort) >= 1.10) (python3.13dist(yte) < 2~~ with python3.13dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.13 python3.13dist(appdirs) python3.13dist(configargparse) python3.13dist(connection-pool) >= 0.0.3 python3.13dist(datrie) python3.13dist(docutils) python3.13dist(gitpython) python3.13dist(humanfriendly) python3.13dist(immutables) python3.13dist(jsonschema) python3.13dist(nbformat) python3.13dist(packaging) python3.13dist(psutil) python3.13dist(pyyaml) python3.13dist(reretry) python3.13dist(stopit) python3.13dist(tabulate) python3.13dist(throttler) python3.13dist(wrapt) Obsoletes: snakemake+azure < 8.1.0-1 snakemake+google-cloud < 8.1.0-1 snakemake-doc < 8.2.1-2 Processing files: snakemake+reports-8.18.2-4.fc42.noarch Provides: python3.13dist(snakemake[reports]) = 8.18.2 python3dist(snakemake[reports]) = 8.18.2 snakemake+reports = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(pygments) Processing files: snakemake+messaging-8.18.2-4.fc42.noarch Provides: python3.13dist(snakemake[messaging]) = 8.18.2 python3dist(snakemake[messaging]) = 8.18.2 snakemake+messaging = 8.18.2-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(slack-sdk) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/snakemake-8.18.2-build/BUILDROOT Wrote: /builddir/build/SRPMS/snakemake-8.18.2-4.fc42.src.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-8.18.2-4.fc42.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+reports-8.18.2-4.fc42.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-8.18.2-4.fc42.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.nkKZzd + umask 022 + cd /builddir/build/BUILD/snakemake-8.18.2-build + test -d /builddir/build/BUILD/snakemake-8.18.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/snakemake-8.18.2-build + rm -rf /builddir/build/BUILD/snakemake-8.18.2-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-8.18.2-4.fc42.src.rpm Finish: build phase for snakemake-8.18.2-4.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-aarch64-1728851947.301682/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-8.18.2-4.fc42.src.rpm) Config(child) 7 minutes 46 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake+reports", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "src" }, { "name": "snakemake+messaging", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "8.18.2", "release": "4.fc42", "arch": "noarch" } ] } RPMResults finished