Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c154' (ED25519) to the list of known hosts. cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BiocParallel_1.30.3.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BiocParallel_1.30.3.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-BiocParallel/BiocParallel_1.30.3.tar.gz/md5/60d92ce6f840f61f4c50f3f374818c26/BiocParallel_1.30.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 874k 100 874k 0 0 10.0M 0 --:--:-- --:--:-- --:--:-- 10.1M INFO: Reading stdout from command: md5sum BiocParallel_1.30.3.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel/R-BiocParallel.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1723019184.654729 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel/R-BiocParallel.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1723019184.654729 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel/R-BiocParallel.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1723019184.654729/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1723019184.654729/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/4269c2762a2eb9bde7bd21cc1500eb2d6ecc26277d4f194837cab2b32b6c1457/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/4269c2762a2eb9bde7bd21cc1500eb2d6ecc26277d4f194837cab2b32b6c1457/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 49.1 MiB/s | 14.1 MiB | 00m00s Copr repository 100% | 21.1 MiB/s | 3.3 MiB | 00m00s fedora 100% | 22.8 MiB/s | 21.4 MiB | 00m01s Repositories loaded. Nothing to do. Package "dnf5-5.2.5.0-2.fc41.x86_64" is already installed. Package "dnf5-plugins-5.2.5.0-2.fc41.x86_64" is already installed. Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1723019184.654729/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.92-6.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.5.0-2.fc41.x86_64 dnf5-plugins-5.2.5.0-2.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 948.2 KiB/s | 23.7 KiB | 00m00s Copr repository 100% | 45.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 76.6 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 25.2 MiB/s | 3.3 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 46.8 MiB/s | 14.1 MiB | 00m00s Repositories loaded. 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832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap x86_64 2.6.8-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 644.2 KiB openssl-libs x86_64 1:3.2.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam x86_64 1.6.1-5.fc41 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67.5 KiB pyproject-srpm-macros noarch 1.14.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.14-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 489.2 KiB rpm x86_64 4.19.92-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB rpm-build-libs x86_64 4.19.92-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 206.7 KiB rpm-libs x86_64 4.19.92-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 721.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 256.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB xxhash-libs x86_64 0.8.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.5 KiB xz-libs x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. 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00m00s >>> Already downloaded [149/154] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [150/154] libevent-0:2.1.12-14.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [151/154] libtool-ltdl-0:2.4.7-12.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [152/154] libssh-config-0:0.10.6-8.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [153/154] libunistring-0:1.1-8.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [154/154] publicsuffix-list-dafsa-0:202 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [154/154] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [ 1/156] Verify package files 100% | 781.0 B/s | 154.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Stop pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 [ 2/156] Prepare transaction 100% | 1.9 KiB/s | 154.0 B | 00m00s [ 3/156] Installing libgcc-0:14.1.1-7. 100% | 134.9 MiB/s | 276.3 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.1.1-7.fc41.x86_64 >>> Stop post-install scriptlet: libgcc-0:14.1.1-7.fc41.x86_64 [ 4/156] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 5/156] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/156] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 7/156] Installing fedora-gpg-keys-0: 100% | 20.7 MiB/s | 169.7 KiB | 00m00s [ 8/156] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/156] Installing fedora-repos-0:41- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/156] Installing fedora-release-com 100% | 11.6 MiB/s | 23.7 KiB | 00m00s [ 11/156] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/156] Installing setup-0:2.15.0-5.f 100% | 50.6 MiB/s | 726.1 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.15.0-5.fc41.noarch >>> Stop post-install scriptlet: setup-0:2.15.0-5.fc41.noarch [ 13/156] Installing filesystem-0:3.18- 100% | 1.7 MiB/s | 212.5 KiB | 00m00s [ 14/156] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/156] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s [ 16/156] Installing coreutils-common-0 100% | 243.3 MiB/s | 11.2 MiB | 00m00s [ 17/156] Installing ncurses-base-0:6.5 100% | 38.2 MiB/s | 351.7 KiB | 00m00s [ 18/156] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/156] Installing ncurses-libs-0:6.5 100% | 137.0 MiB/s | 981.8 KiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.40-3.fc41.x86_64 >>> Stop pre-install scriptlet: glibc-0:2.40-3.fc41.x86_64 warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [ 20/156] Installing glibc-0:2.40-3.fc4 100% | 142.1 MiB/s | 6.7 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.40-3.fc41.x86_64 >>> Stop post-install scriptlet: glibc-0:2.40-3.fc41.x86_64 [ 21/156] Installing bash-0:5.2.26-4.fc 100% | 272.3 MiB/s | 8.2 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.26-4.fc41.x86_64 >>> Stop post-install scriptlet: bash-0:5.2.26-4.fc41.x86_64 [ 22/156] Installing glibc-common-0:2.4 100% | 130.9 MiB/s | 1.0 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [ 23/156] Installing glibc-gconv-extra- 100% | 130.6 MiB/s | 8.1 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.x86_64 >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.x86_64 [ 24/156] Installing zlib-ng-compat-0:2 100% | 131.7 MiB/s | 134.8 KiB | 00m00s [ 25/156] Installing xz-libs-1:5.6.2-2. 100% | 105.2 MiB/s | 215.5 KiB | 00m00s [ 26/156] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 27/156] Installing libuuid-0:2.40.2-4 100% | 37.7 MiB/s | 38.6 KiB | 00m00s [ 28/156] Installing readline-0:8.2-9.f 100% | 159.9 MiB/s | 491.3 KiB | 00m00s [ 29/156] Installing popt-0:1.19-7.fc41 100% | 28.0 MiB/s | 143.5 KiB | 00m00s [ 30/156] Installing libblkid-0:2.40.2- 100% | 126.7 MiB/s | 259.5 KiB | 00m00s [ 31/156] 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| 00m00s [ 65/156] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 66/156] Installing libunistring-0:1.1 100% | 247.2 MiB/s | 1.7 MiB | 00m00s [ 67/156] Installing libidn2-0:2.3.7-2. 100% | 65.4 MiB/s | 335.1 KiB | 00m00s [ 68/156] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s [ 69/156] Installing zstd-0:1.5.6-2.fc4 100% | 281.9 MiB/s | 1.7 MiB | 00m00s [ 70/156] Installing util-linux-core-0: 100% | 123.8 MiB/s | 1.5 MiB | 00m00s [ 71/156] Installing tar-2:1.35-4.fc41. 100% | 227.6 MiB/s | 3.0 MiB | 00m00s [ 72/156] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.2 KiB | 00m00s [ 73/156] Installing shadow-utils-2:4.1 100% | 80.7 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-15.fc41.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-15.fc41.x86_64 [ 74/156] Installing libutempter-0:1.2. 100% | 29.2 MiB/s | 59.7 KiB | 00m00s [ 75/156] Installing zip-0:3.0-41.fc41. 100% | 138.1 MiB/s | 707.1 KiB | 00m00s [ 76/156] Installing gdbm-1:1.23-7.fc41 100% | 113.7 MiB/s | 465.8 KiB | 00m00s [ 77/156] Installing cyrus-sasl-lib-0:2 100% | 230.6 MiB/s | 2.3 MiB | 00m00s [ 78/156] Installing libfdisk-0:2.40.2- 100% | 177.8 MiB/s | 364.1 KiB | 00m00s [ 79/156] Installing bzip2-0:1.0.8-19.f 100% | 48.9 MiB/s | 100.2 KiB | 00m00s [ 80/156] Installing libxml2-0:2.12.8-2 100% | 244.6 MiB/s | 1.7 MiB | 00m00s [ 81/156] Installing add-determinism-0: 100% | 280.7 MiB/s | 2.2 MiB | 00m00s [ 82/156] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 83/156] Installing sqlite-libs-0:3.46 100% | 285.9 MiB/s | 1.4 MiB | 00m00s [ 84/156] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB | 00m00s [ 85/156] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB | 00m00s [ 86/156] Installing elfutils-default-y 100% | 185.7 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-8.fc41.n >>> Stop post-install scriptlet: 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post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64 >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64 [ 99/156] Installing openssl-libs-1:3.2 100% | 252.4 MiB/s | 7.8 MiB | 00m00s [100/156] Installing coreutils-0:9.5-7. 100% | 140.2 MiB/s | 5.6 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.n >>> Stop pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noar [101/156] Installing ca-certificates-0: 100% | 2.5 MiB/s | 2.4 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41. >>> Stop post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noa [102/156] Installing krb5-libs-0:1.21.3 100% | 176.9 MiB/s | 2.3 MiB | 00m00s [103/156] Installing libarchive-0:3.7.4 100% | 180.6 MiB/s | 924.6 KiB | 00m00s [104/156] Installing libtirpc-0:1.3.5-0 100% | 66.6 MiB/s | 204.5 KiB | 00m00s [105/156] Installing gzip-0:1.13-2.fc41 100% | 96.3 MiB/s | 394.6 KiB | 00m00s [106/156] Installing authselect-libs-0: 100% | 74.0 MiB/s | 833.2 KiB | 00m00s [107/156] Installing cracklib-0:2.9.11- 100% | 34.9 MiB/s | 250.3 KiB | 00m00s [108/156] Installing libpwquality-0:1.4 100% | 52.5 MiB/s | 430.1 KiB | 00m00s [109/156] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [110/156] Installing pam-0:1.6.1-5.fc41 100% | 81.6 MiB/s | 1.9 MiB | 00m00s [111/156] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB | 00m00s [112/156] Installing rpm-sequoia-0:1.7. 100% | 236.7 MiB/s | 2.4 MiB | 00m00s [113/156] Installing rpm-libs-0:4.19.92 100% | 176.6 MiB/s | 723.4 KiB | 00m00s [114/156] Installing rpm-build-libs-0:4 100% | 101.3 MiB/s | 207.5 KiB | 00m00s [115/156] Installing libevent-0:2.1.12- 100% | 175.7 MiB/s | 899.5 KiB | 00m00s [116/156] Installing xxhash-libs-0:0.8. 100% | 87.8 MiB/s | 89.9 KiB | 00m00s [117/156] Installing libbrotli-0:1.1.0- 100% | 164.0 MiB/s | 839.9 KiB | 00m00s [118/156] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [119/156] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s [120/156] Installing openldap-0:2.6.8-5 100% | 126.6 MiB/s | 648.0 KiB | 00m00s [121/156] Installing libcurl-0:8.9.1-2. 100% | 200.0 MiB/s | 819.2 KiB | 00m00s [122/156] Installing elfutils-debuginfo 100% | 32.7 MiB/s | 66.9 KiB | 00m00s [123/156] Installing binutils-0:2.42.90 100% | 259.1 MiB/s | 27.5 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.42.90-1.fc41.x86_64 >>> Stop post-install scriptlet: binutils-0:2.42.90-1.fc41.x86_64 [124/156] Installing elfutils-0:0.191-8 100% | 213.4 MiB/s | 2.6 MiB | 00m00s [125/156] Installing gdb-minimal-0:15.1 100% | 276.4 MiB/s | 13.0 MiB | 00m00s [126/156] Installing debugedit-0:5.0-17 100% | 98.6 MiB/s | 202.0 KiB | 00m00s [127/156] Installing curl-0:8.9.1-2.fc4 100% | 43.3 MiB/s | 798.6 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.92-6.fc41.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.19.92-6.fc41.x86_64 [128/156] Installing rpm-0:4.19.92-6.fc 100% | 86.2 MiB/s | 2.5 MiB | 00m00s [129/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [130/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [131/156] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [132/156] Installing pkgconf-m4-0:2.1.1 100% | 0.0 B/s | 14.3 KiB | 00m00s [133/156] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [134/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [135/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [136/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [137/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/156] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 61.9 MiB/s | 190.1 KiB | 00m00s [151/156] Installing rpm-build-0:4.19.9 100% | 49.5 MiB/s | 202.8 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 91.4 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.2-4.fc41.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40.2-4.fc41.x86_64 [154/156] Installing authselect-0:1.5.0 100% | 51.4 MiB/s | 157.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [156/156] Installing info-0:7.1-3.fc41. 100% | 291.2 KiB/s | 362.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.f >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.92-6.fc41.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.92-6.fc41.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 Complete! Warning: skipped PGP checks for 154 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.29-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.1-4.fc41.x86_64 authselect-1.5.0-7.fc41.x86_64 authselect-libs-1.5.0-7.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.26-4.fc41.x86_64 binutils-2.42.90-1.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.68_v8.0.302-3.fc41.noarch coreutils-9.5-7.fc41.x86_64 coreutils-common-9.5-7.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20240802-1.git2e5e430.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-17.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-7.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.20.noarch fedora-release-common-41-0.20.noarch fedora-release-identity-basic-41-0.20.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-1.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-3.fc41.x86_64 glibc-common-2.40-3.fc41.x86_64 glibc-gconv-extra-2.40-3.fc41.x86_64 glibc-minimal-langpack-2.40-3.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-3.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-2.fc41.x86_64 libgcc-14.1.1-7.fc41.x86_64 libgomp-14.1.1-7.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.1.1-2.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.1.1-7.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-5.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-5.fc41.x86_64 pam-libs-1.6.1-5.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.1.1-2.fc41.x86_64 pkgconf-m4-2.1.1-2.fc41.noarch pkgconf-pkg-config-2.1.1-2.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.14.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.14-3.fc41.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-9.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.19.92-6.fc41.x86_64 rpm-build-4.19.92-6.fc41.x86_64 rpm-build-libs-4.19.92-6.fc41.x86_64 rpm-libs-4.19.92-6.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-9.fc41.x86_64 sqlite-libs-3.46.0-3.fc41.x86_64 systemd-libs-256.4-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-4.fc41.x86_64 util-linux-core-2.40.2-4.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-3.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-2.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1722988800 Wrote: /builddir/build/SRPMS/R-BiocParallel-1.30.3-9.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1723019184.654729/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1723019184.654729/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-iacqljkn/R-BiocParallel/R-BiocParallel.spec) Config(child) 0 minutes 30 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-BiocParallel-1.30.3-9.fc41.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1723019184.654729/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1723019184.654729/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1723019184.654729/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.92-6.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.5.0-2.fc41.x86_64 dnf5-plugins-5.2.5.0-2.fc41.x86_64 Finish: chroot init Start: build phase for R-BiocParallel-1.30.3-9.fc41.src.rpm Start: build setup for R-BiocParallel-1.30.3-9.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1722988800 Wrote: /builddir/build/SRPMS/R-BiocParallel-1.30.3-9.fc41.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 73.6 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 42.7 KiB/s | 1.5 KiB | 00m00s fedora 100% | 1.0 MiB/s | 23.7 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-BH-devel noarch 1.78.0.0-12.fc41 copr_base 119.8 MiB R-core x86_64 4.4.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101.5 MiB R-devel x86_64 4.4.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B R-futile.logger noarch 1.4.3-25.fc41 copr_base 151.3 KiB R-snow noarch 0.4.4-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140.2 KiB autoconf noarch 2.72-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB automake noarch 1.16.5-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB gcc x86_64 14.1.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 104.1 MiB gcc-c++ x86_64 14.1.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.1 MiB Installing dependencies: R-core-devel x86_64 4.4.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 394.7 KiB R-formatR noarch 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.3 MiB python3-packaging noarch 24.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 422.3 KiB sysprof-capture-devel x86_64 47~alpha-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 252.6 KiB tcl x86_64 1:8.6.14-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 MiB tcl-devel x86_64 1:8.6.14-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 791.3 KiB tk x86_64 1:8.6.14-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 MiB tk-devel x86_64 1:8.6.14-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 984.9 KiB tre x86_64 0.8.0-45.20140228gitc2f5d13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75.9 KiB tre-common noarch 0.8.0-45.20140228gitc2f5d13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.0 KiB tre-devel x86_64 0.8.0-45.20140228gitc2f5d13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.7 KiB ttmkfdir x86_64 3.0.9-71.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122.7 KiB tzdata noarch 2024a-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB tzdata-java noarch 2024a-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101.7 KiB xdg-utils noarch 1.2.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 346.3 KiB xml-common noarch 0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-39.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863.3 KiB xorg-x11-proto-devel noarch 2024.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB xz-devel x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 255.6 KiB zlib-ng-compat-devel x86_64 2.1.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.8 KiB Transaction Summary: Installing: 233 packages Total size of inbound packages is 288 MiB. 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| 00m00s [156/235] Installing brotli-0:1.1.0-5.f 100% | 31.7 MiB/s | 32.5 KiB | 00m00s [157/235] Installing brotli-devel-0:1.1 100% | 6.6 MiB/s | 68.0 KiB | 00m00s >>> Running pre-install scriptlet: xml-common-0:0.6.3-65.fc41.noarch >>> Stop pre-install scriptlet: xml-common-0:0.6.3-65.fc41.noarch [158/235] Installing xml-common-0:0.6.3 100% | 26.4 MiB/s | 81.1 KiB | 00m00s [159/235] Installing kernel-headers-0:6 100% | 112.8 MiB/s | 6.5 MiB | 00m00s [160/235] Installing glibc-headers-x86- 100% | 99.4 MiB/s | 2.3 MiB | 00m00s [161/235] Installing libxcrypt-devel-0: 100% | 15.9 MiB/s | 32.6 KiB | 00m00s [162/235] Installing glibc-devel-0:2.40 100% | 18.7 MiB/s | 38.4 KiB | 00m00s [163/235] Installing gcc-0:14.1.1-7.fc4 100% | 284.6 MiB/s | 104.2 MiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch [164/235] Installing libquadmath-devel- 100% | 22.7 MiB/s | 23.3 KiB | 00m00s 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pre-install scriptlet: tk-1:8.6.14-2.fc41.x86_64 [175/235] Installing tk-1:8.6.14-2.fc41 100% | 140.8 MiB/s | 3.7 MiB | 00m00s [176/235] Installing libXi-0:1.8.1-6.fc 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [177/235] Installing libXt-0:1.3.0-4.fc 100% | 210.5 MiB/s | 431.1 KiB | 00m00s [178/235] Installing libXmu-0:1.2.1-2.f 100% | 94.5 MiB/s | 193.5 KiB | 00m00s [179/235] Installing libXtst-0:1.2.5-1. 100% | 33.8 MiB/s | 34.7 KiB | 00m00s [180/235] Installing mkfontscale-0:1.2. 100% | 49.4 MiB/s | 50.6 KiB | 00m00s [181/235] Installing ttmkfdir-0:3.0.9-7 100% | 120.9 MiB/s | 123.8 KiB | 00m00s [182/235] Installing xorg-x11-fonts-Typ 100% | 14.6 MiB/s | 865.6 KiB | 00m00s >>> Running post-install scriptlet: xorg-x11-fonts-Type1-0:7.5-39.fc41.noarch >>> Stop post-install scriptlet: xorg-x11-fonts-Type1-0:7.5-39.fc41.noarch [183/235] Installing harfbuzz-icu-0:9.0 100% | 16.0 MiB/s | 16.4 KiB | 00m00s [184/235] Installing libXcomposite-0:0. 100% | 45.0 MiB/s | 46.1 KiB | 00m00s [185/235] Installing java-21-openjdk-1: 100% | 57.0 MiB/s | 1.1 MiB | 00m00s >>> Running post-install scriptlet: java-21-openjdk-1:21.0.4.0.7-2.fc41.x86_64 >>> Stop post-install scriptlet: java-21-openjdk-1:21.0.4.0.7-2.fc41.x86_64 [186/235] Installing java-21-openjdk-de 100% | 244.3 MiB/s | 11.2 MiB | 00m00s >>> Running post-install scriptlet: java-21-openjdk-devel-1:21.0.4.0.7-2.fc41.x8 >>> Stop post-install scriptlet: java-21-openjdk-devel-1:21.0.4.0.7-2.fc41.x86_6 [187/235] Installing libX11-xcb-0:1.8.1 100% | 7.7 MiB/s | 15.9 KiB | 00m00s [188/235] Installing libX11-devel-0:1.8 100% | 36.1 MiB/s | 1.1 MiB | 00m00s [189/235] Installing libXrender-devel-0 100% | 49.8 MiB/s | 51.0 KiB | 00m00s [190/235] Installing libXext-devel-0:1. 100% | 27.1 MiB/s | 110.9 KiB | 00m00s [191/235] Installing libdatrie-0:0.2.13 100% | 57.7 MiB/s | 59.0 KiB | 00m00s [192/235] Installing libthai-0:0.1.29-9 100% | 191.7 MiB/s | 785.3 KiB | 00m00s [193/235] Installing libwebp-0:1.4.0-3. 100% | 201.8 MiB/s | 826.8 KiB | 00m00s [194/235] Installing liblerc-0:4.0.0-7. 100% | 198.3 MiB/s | 609.0 KiB | 00m00s [195/235] Installing jbigkit-libs-0:2.1 100% | 116.8 MiB/s | 119.6 KiB | 00m00s [196/235] Installing libtiff-0:4.6.0-5. 100% | 196.7 MiB/s | 604.3 KiB | 00m00s [197/235] Installing fribidi-0:1.0.15-2 100% | 181.1 MiB/s | 370.9 KiB | 00m00s [198/235] Installing pango-0:1.54.0-2.f 100% | 163.1 MiB/s | 1.0 MiB | 00m00s [199/235] Installing pcre2-utf32-0:10.4 100% | 274.8 MiB/s | 562.8 KiB | 00m00s [200/235] Installing pcre2-utf16-0:10.4 100% | 288.5 MiB/s | 590.9 KiB | 00m00s [201/235] Installing pcre2-devel-0:10.4 100% | 153.5 MiB/s | 2.0 MiB | 00m00s [202/235] Installing libselinux-devel-0 100% | 15.7 MiB/s | 161.2 KiB | 00m00s [203/235] Installing libmount-devel-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [204/235] Installing glib2-devel-0:2.81 100% | 280.6 MiB/s | 15.7 MiB | 00m00s [205/235] Installing fontconfig-devel-0 100% | 13.5 MiB/s | 151.9 KiB | 00m00s [206/235] Installing harfbuzz-devel-0:9 100% | 221.9 MiB/s | 5.1 MiB | 00m00s [207/235] Installing freetype-devel-0:2 100% | 245.5 MiB/s | 7.9 MiB | 00m00s [208/235] Installing cairo-devel-0:1.18 100% | 286.4 MiB/s | 2.3 MiB | 00m00s [209/235] Installing libXft-devel-0:2.3 100% | 8.6 MiB/s | 44.3 KiB | 00m00s [210/235] Installing tk-devel-1:8.6.14- 100% | 91.9 MiB/s | 1.0 MiB | 00m00s [211/235] Installing tre-common-0:0.8.0 100% | 81.2 MiB/s | 83.1 KiB | 00m00s [212/235] Installing tre-0:0.8.0-45.201 100% | 74.9 MiB/s | 76.7 KiB | 00m00s [213/235] Installing tre-devel-0:0.8.0- 100% | 0.0 B/s | 11.6 KiB | 00m00s [214/235] Installing less-0:661-1.fc41. 100% | 20.0 MiB/s | 408.6 KiB | 00m00s [215/235] Installing R-core-0:4.4.1-5.f 100% | 128.0 MiB/s | 103.7 MiB | 00m01s [216/235] Installing R-futile.options-0 100% | 18.1 MiB/s | 37.0 KiB | 00m00s [217/235] Installing R-rpm-macros-0:1.2 100% | 6.4 MiB/s | 6.6 KiB | 00m00s [218/235] Installing R-formatR-0:1.13-1 100% | 62.8 MiB/s | 257.4 KiB | 00m00s [219/235] Installing R-lambda.r-0:1.2.4 100% | 50.9 MiB/s | 156.4 KiB | 00m00s [220/235] Installing R-java-0:4.4.1-5.f 100% | 0.0 B/s | 124.0 B | 00m00s [221/235] Installing libtirpc-devel-0:1 100% | 64.2 MiB/s | 263.0 KiB | 00m00s [222/235] Installing annobin-docs-0:12. 100% | 96.3 MiB/s | 98.6 KiB | 00m00s [223/235] Installing m4-0:1.4.19-10.fc4 100% | 97.5 MiB/s | 599.2 KiB | 00m00s [224/235] Installing autoconf-0:2.72-3. 100% | 199.8 MiB/s | 2.8 MiB | 00m00s [225/235] Installing libstdc++-devel-0: 100% | 207.3 MiB/s | 15.6 MiB | 00m00s [226/235] Installing gcc-c++-0:14.1.1-7 100% | 298.1 MiB/s | 38.2 MiB | 00m00s [227/235] Installing R-core-devel-0:4.4 100% | 98.0 MiB/s | 401.3 KiB | 00m00s [228/235] Installing R-java-devel-0:4.4 100% | 0.0 B/s | 124.0 B | 00m00s [229/235] Installing R-devel-0:4.4.1-5. 100% | 0.0 B/s | 124.0 B | 00m00s [230/235] Installing automake-0:1.16.5- 100% | 147.0 MiB/s | 1.8 MiB | 00m00s [231/235] Installing annobin-plugin-gcc 100% | 37.0 MiB/s | 986.2 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch [232/235] Installing R-futile.logger-0: 100% | 6.3 MiB/s | 162.0 KiB | 00m00s [233/235] Installing R-BH-devel-0:1.78. 100% | 134.3 MiB/s | 122.2 MiB | 00m01s [234/235] Installing R-snow-0:0.4.4-17. 100% | 25.8 MiB/s | 158.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [235/235] Installing gcc-plugin-annobin 100% | 67.4 KiB/s | 58.7 KiB | 00m01s >>> Running trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:293-1.fc41.noarch >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240802-1.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240802-1.git2e5 >>> Running post-transaction scriptlet: nss-0:3.101.0-4.fc41.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.101.0-4.fc41.x86_64 >>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-6.fc41.noarch >>> Stop post-transaction scriptlet: copy-jdk-configs-0:4.1-6.fc41.noarch >>> Running post-transaction scriptlet: java-21-openjdk-headless-1:21.0.4.0.7-2. >>> Stop post-transaction scriptlet: java-21-openjdk-headless-1:21.0.4.0.7-2.fc4 >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-1:21.0.4.0.7-2.fc41.x86_ >>> Stop post-transaction scriptlet: java-21-openjdk-1:21.0.4.0.7-2.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-devel-1:21.0.4.0.7-2.fc4 >>> Stop post-transaction scriptlet: java-21-openjdk-devel-1:21.0.4.0.7-2.fc41.x >>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.81.1-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.81.1-1.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.81.1-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.81.1-1.fc41.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 Complete! Warning: skipped PGP checks for 233 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: build setup for R-BiocParallel-1.30.3-9.fc41.src.rpm Start: rpmbuild R-BiocParallel-1.30.3-9.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1722988800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.lj2VXw + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + test -d /builddir/build/BUILD/R-BiocParallel-1.30.3-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-BiocParallel-1.30.3-build + /usr/bin/rm -rf /builddir/build/BUILD/R-BiocParallel-1.30.3-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-BiocParallel-1.30.3-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-BiocParallel-1.30.3-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kIajTt + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + rm -rf BiocParallel + /usr/bin/mkdir -p BiocParallel + cd BiocParallel + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BiocParallel_1.30.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + chmod -x BiocParallel/inst/snow/RMPInode.R + pushd BiocParallel ~/build/BUILD/R-BiocParallel-1.30.3-build/BiocParallel/BiocParallel ~/build/BUILD/R-BiocParallel-1.30.3-build/BiocParallel + autoreconf -ifv autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: configure.ac: not using Libtool autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: running: /usr/bin/autoconf --force autoreconf: configure.ac: not using Autoheader autoreconf: configure.ac: not using Automake autoreconf: Leaving directory '.' + popd ~/build/BUILD/R-BiocParallel-1.30.3-build/BiocParallel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.6hGyeI + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.J6qwYE + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + '[' /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-BiocParallel-1.30.3-build + mkdir /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + mkdir -p /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT/usr/lib64/R/library BiocParallel * installing *source* package ‘BiocParallel’ ... ** using staged installation checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for shm_open in -lrt... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++ (GCC) 14.1.1 20240701 (Red Hat 14.1.1-7)’ using C++11 g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/share/R/library/BH/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ipcmutex.cpp -o ipcmutex.o In file included from /usr/share/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /usr/share/R/library/BH/include/boost/mpl/arg.hpp:25, from /usr/share/R/library/BH/include/boost/mpl/placeholders.hpp:24, from /usr/share/R/library/BH/include/boost/mpl/apply.hpp:24, from /usr/share/R/library/BH/include/boost/mpl/aux_/fold_impl.hpp:19, from /usr/share/R/library/BH/include/boost/mpl/fold.hpp:20, from /usr/share/R/library/BH/include/boost/mpl/remove_if.hpp:18, from /usr/share/R/library/BH/include/boost/mpl/remove.hpp:18, from /usr/share/R/library/BH/include/boost/function_types/components.hpp:44, from /usr/share/R/library/BH/include/boost/function_types/is_member_function_pointer.hpp:14, from /usr/share/R/library/BH/include/boost/tti/detail/dmem_fun.hpp:10, from /usr/share/R/library/BH/include/boost/tti/has_member_function.hpp:15, from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:20, from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, from ipcmutex.cpp:3: /usr/share/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /usr/share/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /usr/share/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /usr/share/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o BiocParallel.so ipcmutex.o -lrt -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT/usr/lib64/R/library/00LOCK-BiocParallel/00new/BiocParallel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘BiocParallel’ finding HTML links ... done BatchJobsParam-class html BatchtoolsParam-class html BiocParallel-package html BiocParallelParam-class html DeveloperInterface html DoparParam-class html MulticoreParam-class html SerialParam-class html SnowParam-class html bpaggregate html bpiterate html bplapply html bploop html bpmapply html bpok html bpoptions html bpschedule html bptry html bpvalidate html bpvec html bpvectorize html ipcmutex html register html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocParallel) + test -d BiocParallel/src + cd BiocParallel/src + rm -f ipcmutex.o BiocParallel.so + rm -rf /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT/usr/lib64/R/library/R.css + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.30.3-9.fc41 --unique-debug-suffix -1.30.3-9.fc41.x86_64 --unique-debug-src-base R-BiocParallel-1.30.3-9.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BiocParallel find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-BiocParallel-1.30.3-9.fc41.x86_64 9 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/R/library/BiocParallel/RMPInode.sh from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/R/library/BiocParallel/RSOCKnode.sh from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT Scanned 28 directories and 377 files, processed 313 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-BiocParallel-1.30.3-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.p2QuHi + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + RPM_EC=0 ++ jobs -p Processing files: R-BiocParallel-1.30.3-9.fc41.x86_64 + exit 0 Provides: R(BiocParallel) = 1.30.3 R-BiocParallel = 1.30.3-9.fc41 R-BiocParallel(x86-64) = 1.30.3-9.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/sh R(ABI) = 4.4 R(codetools) R(futile.logger) R(methods) R(parallel) R(snow) R(stats) R(utils) R-core >= 3.5.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.25)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) rtld(GNU_HASH) Suggests: R(BiocGenerics) R(GenomicAlignments) R(GenomicRanges) R(RUnit) R(Rsamtools) R(data.table) R(doParallel) R(foreach) R(knitr) R(tools) Processing files: R-BiocParallel-debugsource-1.30.3-9.fc41.x86_64 Provides: R-BiocParallel-debugsource = 1.30.3-9.fc41 R-BiocParallel-debugsource(x86-64) = 1.30.3-9.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-BiocParallel-debuginfo-1.30.3-9.fc41.x86_64 Provides: R-BiocParallel-debuginfo = 1.30.3-9.fc41 R-BiocParallel-debuginfo(x86-64) = 1.30.3-9.fc41 debuginfo(build-id) = 25d8eaec8f6d71a5db20c1ba2fa2400be3e299e5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-BiocParallel-debugsource(x86-64) = 1.30.3-9.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-BiocParallel-1.30.3-build/BUILDROOT Wrote: /builddir/build/RPMS/R-BiocParallel-debuginfo-1.30.3-9.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/R-BiocParallel-1.30.3-9.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/R-BiocParallel-debugsource-1.30.3-9.fc41.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.GEMGt7 + umask 022 + cd /builddir/build/BUILD/R-BiocParallel-1.30.3-build + test -d /builddir/build/BUILD/R-BiocParallel-1.30.3-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-BiocParallel-1.30.3-build + rm -rf /builddir/build/BUILD/R-BiocParallel-1.30.3-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-BiocParallel-1.30.3-9.fc41.src.rpm Finish: build phase for R-BiocParallel-1.30.3-9.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1723019184.654729/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/R-BiocParallel-1.30.3-9.fc41.src.rpm) Config(child) 0 minutes 36 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-BiocParallel", "epoch": null, "version": "1.30.3", "release": "9.fc41", "arch": "x86_64" }, { "name": "R-BiocParallel-debugsource", "epoch": null, "version": "1.30.3", "release": "9.fc41", "arch": "x86_64" }, { "name": "R-BiocParallel-debuginfo", "epoch": null, "version": "1.30.3", "release": "9.fc41", "arch": "x86_64" }, { "name": "R-BiocParallel", "epoch": null, "version": "1.30.3", "release": "9.fc41", "arch": "src" } ] } RPMResults finished